Cmc06g0161331.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc06g0161331.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr06: 9756226 .. 9756670 (+)
Sequence length445
RNA-Seq ExpressionCmc06g0161331.1
SyntenyCmc06g0161331.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGCCTTTGTTAAGACTGACCATTCGAGCAGAAGCATCCATCTGGGATCCTCTGGAAGATCCCGACTGATAAGCAGTCCTCCCCGACCCATATGCAGCATCTTGATAACGGGTGCTTTGGTATCCTGCATTGCCTCCTCGAGACTGGCCCATCCGGTCTCTATAGTATCCACCAACCCCACCTTGGCCTCGCCCACCACTGCTGTATCCTGCACGTGAACTAGGACCGCCTTGCCTTCCTTGATTATAAGACATGTTATCTGGCCACCTGCTACTCCCACCTACAGCTCCTCCAGCACCATATTCTTGGTTGTCCCTTCGCCTCATTGGTAAATCTAATCCTCCTCCAATTCTTGCCTCAACTGCTCTCTCATTACTTTCAGCAAGGATTGACAACTTATCAGCCAATTGGAACGCCAGGCCCTGTAACCGGGTGTGAGTA

mRNA sequence

ATGAACGCCTTTGTTAAGACTGACCATTCGAGCAGAAGCATCCATCTGGGATCCTCTGGAAGATCCCGACTGATAAGCAGTCCTCCCCGACCCATATGCAGCATCTTGATAACGGGTGCTTTGGTATCCTGCATTGCCTCCTCGAGACTGGCCCATCCGGTCTCTATAGTATCCACCAACCCCACCTTGGCCTCGCCCACCACTGCTGTATCCTGCACGTGAACTAGGACCGCCTTGCCTTCCTTGATTATAAGACATGTTATCTGGCCACCTGCTACTCCCACCTACAGCTCCTCCAGCACCATATTCTTGGTTGTCCCTTCGCCTCATTGGTAAATCTAATCCTCCTCCAATTCTTGCCTCAACTGCTCTCTCATTACTTTCAGCAAGGATTGACAACTTATCAGCCAATTGGAACGCCAGGCCCTGTAACCGGGTGTGAGTA

Coding sequence (CDS)

ATGAACGCCTTTGTTAAGACTGACCATTCGAGCAGAAGCATCCATCTGGGATCCTCTGGAAGATCCCGACTGATAAGCAGTCCTCCCCGACCCATATGCAGCATCTTGATAACGGGTGCTTTGGTATCCTGCATTGCCTCCTCGAGACTGGCCCATCCGGTCTCTATAGTATCCACCAACCCCACCTTGGCCTCGCCCACCACTGCTGTATCCTGCACGTGA

Protein sequence

MNAFVKTDHSSRSIHLGSSGRSRLISSPPRPICSILITGALVSCIASSRLAHPVSIVSTNPTLASPTTAVSCT
Homology
The following BLAST results are available for this feature:
BLAST of Cmc06g0161331.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc06g0161331.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc06g0161331.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc06g0161331.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc06g0161331Cmc06g0161331gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc06g0161331.1-exonCmc06g0161331.1-exon-CMiso1.1chr06:9756226..9756670exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc06g0161331.1-cdsCmc06g0161331.1-cds-CMiso1.1chr06:9756226..9756447CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc06g0161331.1-three_prime_utrCmc06g0161331.1-three_prime_utr-CMiso1.1chr06:9756448..9756670three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc06g0161331.1Cmc06g0161331.1-proteinpolypeptide