Cmc05g0124491.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc05g0124491.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr05: 1845878 .. 1848237 (+)
Sequence length1487
RNA-Seq ExpressionCmc05g0124491.1
SyntenyCmc05g0124491.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGGTTGTAACAAGATGAAAGAGCAACCCACAAGATTAAAGGTCTATTCCACTAATTAATGGCTAATGCATTTCACTTATTGGACAGGGTTCTATGGTCTTGAAAGCATCATTTTTTTTTTGGACAAACTATGTTGGAGAAGATGGAGAGCTTTTAACTTCGAGGTCGATGACATATACTTGATATCGGTTAGATTATGTTTTTTCCATATCGAAGATGTCCTTGGAGTGATCTTGAGATTCATTCAACCAAAACAAACAAAAGAAAAATCGTAGTAAGGTAGATTAAAGAAACCTATAACGATTTACTTTTACTGTGAAAGAGAAAATAGTTCATATGTGTTTTCAATTAAAAAGTTTGTGATTTGTAGTTTTTGGATGATCAGTATAGGAATCTGTTTGTTTATTCGTCATGACGAATTATCGACCAAGTCCATTGACGAGCAGAGACTAAATTCAACTGATGCTTCTACTTTGCATCTGACGAGCTCAAATTTCCAATGATAAGTTGGATCAAACTCCCCTCTATTAGTTTCAACCTATCTACTATTGATTGCTGTAGTTTAATATTGATCTAATGTGGATTATGCATCATTTCAATCGGGAGAATGTTAACTTCAGCTACATTGAAATGGTGTTCTACTTCTTCCAGGCAACAACAAACTATAACCCCTAATTCAGGTTTGTTATTCCCAACAACTCTATCTTTCAACTTCGCTGAGCTATCGGTTATTTATAATTTAGAACATATGAAATTCGGAGCTTTGAGAAATAAAATTCTGTTACTCTTGATTACATAATATATAGTTCACCAACTGGAATTGCTTTTGGAGCTTATGCATCCATTCAAGGATTGAATAATAATGCACAATTTACTTAAGTGATGATAAATTTATGGTTTGCTTGGTTACTTCTTCTGTGTTTCAAGAAACTATATGCAATGCAACTCTTCCATGTATCTATCTGTAACCAAGAATATTTAGCTGATCCATTTCTGTAGTTCTATACATTTTTTTCTTGATTAATACACAAAAGGAGAAAGAAGATTGGAGAGTAATTGTTCACTTCCTTTTCCCCCTTTCTCCATTTTCTTTCCATGTTTTGGGAAGGAAAACTAATGTTGAGAACCTTACACAGAACAACAATGGACGAGGCTATCACTTTCAAGTTCAACCAAGATTGACCATCGTTCCTAACTTAATTTTCTTCTTCAATTTTTTCATTCTCTGCTTCATCATCATCGTGCTCTTCAAATTCTTCATCATCCTCTTCCATGATATAATCATTCGGTTGAACAATTTGCAGTTTCAAACGTCCATCCTCTCTACGCGCTTGTAGAAATTCCTGAGTGGGAATTCTTATTTCTTTCAAGACAAACCTTCCATCTTGTCTATACGAAGTGAAGCGAACTCCTGTCTTTGCACTCTTTCCTATGAAAGATAAAGGTGGAGGGAAAGCTTGTCTACTCGTCCTTGACCTCCTAAGTTCCCCACTTGAAGTCCCAGATGCAACATGCTTGACAGAAGCACTCACCATTTTCTCTTCTTTGATCGTCTCAACTTGAAAGTTCTCCTCGACATCATCTGAACTTTCTGACCCCAATCCCTCTGTACAAAGTTGTAGACTTTCTGACTTCACCAAGGAAAACCCAACATCAATCTTGCTGCAGCTGGAATAATGATTGTTTCCAAGAGGGAATGAAAAAGGGTACTCTTCTTTCTTATTTTCCTTCTTGTTCTGGTTTTTGTTTGTTGACATTTGGCTTGAATCTATGGAAGAAGATAATAAATTTGGCTCATGTAACTGTGAAGACAAACCGTCTTTGGTATAGAGGTCACCAAATACCTCAGAGAATGAAGACCCCTGAGTTTGCTTGACAGGATTAACAACATTCTGGCTCCATGATGACATGACTGACTCAAGAAGGGTTTGGTTTTCAGGGAACTGGTTTTCAAAGATGTGTTGAGGGCTTTTACAGACAGCCATGGTTTGGCTCTCTAGAATTGGGATTGCTGGCTTTGAAAGATAAATAATCTAAAACTCAAAGGGAAATGACTTCTTGCAGGTGAACTGAAGAGTAAGGTGAGATGGTGAGGATGCACGAGATTGGCAATGGATAGAAACAATGAAAGTAAGACTTATTAATTAGGCCAGCTGATTTTTCTCTTTTCCTTTTGGTCTCTTGGATTGGAATATTGACGGGTGGCTGTAATGACAAGCATGGATTTGGTGGTTGTCATTATTTTGGAAATTTGGCATATCCCTGTTGATTATAATTTCATGTTGCTATAATCTAATGGAACAGTTTGTGGTGTTTGTTCTTTTGTCTCTGCAGCAAAACACATACAAAGTTGATATCT

mRNA sequence

CTTGGTTGTAACAAGATGAAAGAGCAACCCACAAGATTAAAGGTCTATTCCACTAATTAATGGCTAATGCATTTCACTTATTGGACAGGGTTCTATGGTCTTGAAAGCATCATTTTTTTTTTGGACAAACTATGTTGGAGAAGATGGAGAGCTTTTAACTTCGAGGTCGATGACATATACTTGATATCGGTTAGATTATGTTTTTTCCATATCGAAGATGTCCTTGGAGTGATCTTGAGATTCATTCAACCAAAACAAACAAAAGAAAAATCGTAGTAAGTATAGGAATCTGTTTGTTTATTCGTCATGACGAATTATCGACCAAGTCCATTGACGAGCAGAGACTAAATTCAACTGATGCTTCTACTTTGCATCTGACGAGCTCAAATTTCCAATGATAAGTTGGATCAAACTCCCCTCTATTAGTTTCAACCTATCTACTATTGATTGCTGTAGTTTAATATTGATCTAATGTGGATTATGCATCATTTCAATCGGGAGAATGTTAACTTCAGCTACATTGAAATGGTGTTCTACTTCTTCCAGGCAACAACAAACTATAACCCCTAATTCAGAACAACAATGGACGAGGCTATCACTTTCAAGTTCAACCAAGATTGACCATCGTTCCTAACTTAATTTTCTTCTTCAATTTTTTCATTCTCTGCTTCATCATCATCGTGCTCTTCAAATTCTTCATCATCCTCTTCCATGATATAATCATTCGGTTGAACAATTTGCAGTTTCAAACGTCCATCCTCTCTACGCGCTTGTAGAAATTCCTGAGTGGGAATTCTTATTTCTTTCAAGACAAACCTTCCATCTTGTCTATACGAAGTGAAGCGAACTCCTGTCTTTGCACTCTTTCCTATGAAAGATAAAGGTGGAGGGAAAGCTTGTCTACTCGTCCTTGACCTCCTAAGTTCCCCACTTGAAGTCCCAGATGCAACATGCTTGACAGAAGCACTCACCATTTTCTCTTCTTTGATCGTCTCAACTTGAAAGTTCTCCTCGACATCATCTGAACTTTCTGACCCCAATCCCTCTGTACAAAGTTGTAGACTTTCTGACTTCACCAAGGAAAACCCAACATCAATCTTGCTGCAGCTGGAATAATGATTGTTTCCAAGAGGGAATGAAAAAGGGGAACTGGTTTTCAAAGATGTGTTGAGGGCTTTTACAGACAGCCATGGTGAACTGAAGAGTAAGGTGAGATGGTGAGGATGCACGAGATTGGCAATGGATAGAAACAATGAAAGTAAGACTTATTAATTAGGCCAGCTGATTTTTCTCTTTTCCTTTTGGTCTCTTGGATTGGAATATTGACGGGTGGCTGTAATGACAAGCATGGATTTGGTGGTTGTCATTATTTTGGAAATTTGGCATATCCCTGTTGATTATAATTTCATGTTGCTATAATCTAATGGAACAGTTTGTGGTGTTTGTTCTTTTGTCTCTGCAGCAAAACACATACAAAGTTGATATCT

Coding sequence (CDS)

ATGCATTTCACTTATTGGACAGGGTTCTATGGTCTTGAAAGCATCATTTTTTTTTTGGACAAACTATGTTGGAGAAGATGGAGAGCTTTTAACTTCGAGGTCGATGACATATACTTGATATCGGTTAGATTATGTTTTTTCCATATCGAAGATGTCCTTGGAGTGATCTTGAGATTCATTCAACCAAAACAAACAAAAGAAAAATCGTAG

Protein sequence

MHFTYWTGFYGLESIIFFLDKLCWRRWRAFNFEVDDIYLISVRLCFFHIEDVLGVILRFIQPKQTKEKS
Homology
The following BLAST results are available for this feature:
BLAST of Cmc05g0124491.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc05g0124491.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc05g0124491.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc05g0124491.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc05g0124491Cmc05g0124491gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0124491.1-exonCmc05g0124491.1-exon-CMiso1.1chr05:1845878..1846157exon
Cmc05g0124491.1-exonCmc05g0124491.1-exon-CMiso1.1chr05:1846264..1846558exon
Cmc05g0124491.1-exonCmc05g0124491.1-exon-CMiso1.1chr05:1847015..1847584exon
Cmc05g0124491.1-exonCmc05g0124491.1-exon-CMiso1.1chr05:1847818..1847864exon
Cmc05g0124491.1-exonCmc05g0124491.1-exon-CMiso1.1chr05:1847943..1848237exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0124491.1-five_prime_utrCmc05g0124491.1-five_prime_utr-CMiso1.1chr05:1845878..1845943five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0124491.1-cdsCmc05g0124491.1-cds-CMiso1.1chr05:1845944..1846153CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0124491.1-three_prime_utrCmc05g0124491.1-three_prime_utr-CMiso1.1chr05:1846154..1846157three_prime_UTR
Cmc05g0124491.1-three_prime_utrCmc05g0124491.1-three_prime_utr-CMiso1.1chr05:1846264..1846558three_prime_UTR
Cmc05g0124491.1-three_prime_utrCmc05g0124491.1-three_prime_utr-CMiso1.1chr05:1847015..1847584three_prime_UTR
Cmc05g0124491.1-three_prime_utrCmc05g0124491.1-three_prime_utr-CMiso1.1chr05:1847818..1847864three_prime_UTR
Cmc05g0124491.1-three_prime_utrCmc05g0124491.1-three_prime_utr-CMiso1.1chr05:1847943..1848237three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc05g0124491.1Cmc05g0124491.1-proteinpolypeptide