Cmc05g0123571.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc05g0123571.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr05: 1188914 .. 1191497 (-)
Sequence length938
RNA-Seq ExpressionCmc05g0123571.1
SyntenyCmc05g0123571.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCACTAAACATGTATATACACGTCAGGAGGAACAGAATGCCAAAAAGATATCATATCCTAGAAAGAACTTTGTTACCTGAGCATTTTGCAAACCGTCAGATGCTTCAACTACAATTTTTCGGTCCACACAGATATCATTTCCAGGCTGCAGGCATCTCTTGAAATATTGTATTGCATTGTCAACTTCCCCAAGGCCAAGGTAACAGCTAATTTATGAGATAGTACTTTAGTGATACGTTATAACATAATTTTCAAGATCTACTTCAATTTATAGTTCCAATCATAAGATCTACTATAGAGAATGTGTACGCCAACCAAGCACAACCAGAATATGCTATTATAAAAGGTTCTGATATTTACAAAGAGAATCACTAACAAATCATTCCTGCTACGACCCTAACATATGACAATAGGAGAAACAAAATTATTCTTTTTATATGCTAATATTTGCAAGTATGTGTAGCTTCCTATGTCGTTCTAATGGTAAAAAAGGCAAACTGTAAACTCAAACGCATTTTAAGGTTAAGTGTTAAAATCTTAAGGCCACCTACTCATGATGTTAAATAAAAGTTCTCCGATGCTAAATATTATAAGCTCTGACAATTCACTTTTATCTTTTGGAGATGAAAACCCAACCATTGAAAAAATGAAAGAATATACAAAGATATCCAAAAACACTAAGTCCAAAAAAGGGTACAACCCTGGTCCTAACACACTTTCTTTAAGATTCTATCATGATATCACCACAAAAAGGCACTAATCAAGCAAAATATAATCTAATAAATAATTAGAAAAAGTGTTTGCCACCGACCCCCAAAGAAAAACATATTAACACACTTTCTTTAAGATTCTACATACATGCATCGGACATACAGTTAAAAAAATGCTTAAGCAACTAACTACCGAGAATGAAAACATTTCTTTAACGTCAGACAAAGAAGCCTTAAAGAGTTATGGATGTGCGTATGTGTGTATCAAACTCAGAATAAGACAGAAAGACAATAAAGAAACAGCGAGGCCTTACTTTGCAGCTCTAAGGTACACTTTATAAAAGCCAGGATCTATAGCAGCAGCCATTGTACAGTCACTGATTGCGTCTCTCAATCTTCCAAGAGACATTCTAGTTGCTGCACGATTGCTATAGCAAAGCATCAAAGCCCTGAGACAGCTTCTAGACGATTCATCTCTTGAAATACAATTCACCCCTTGAGTGTAATGATCCTCGGCTTTGGATAAATCACCACTTGCATATGCCTGGTTGCCTCTGCAACATGTTAGGCAAATAAAAGAGAGAAAAATTTGAAGCTGGCGATGCCAAAGTAAAAGACAACACCTAATTGAACTGAAAATTCCAAGGACACACCTATTATGATACCTACGACAAGAAAAAATTTTAAGCACCAAAACACTAACCTCAATCTCCACTTTTCACAAGCCTCCTGGGCAGCAACTGTTGCTGCCATAGTAGAAACAGGCTCTTGCTTCACCTCCGGGCCTTTGTTCACCCAAGAGCCAACTCCATATTTTTGCTGAGCCATAGATGAATCTCCTTTCTGACTTTTCTGGGACGATATCGGTGATGAATTCCCAGAAAATGTTACGAATTGCGCAGAAGAAGATGACAATGGAACCTCAATGCCAATTGTTGGCGACATATGAGAATCTTGACCAACTTTTCCCCAACTTTTCTTTTTAAATTGGCGTTTGGATGCAGATGATTGACCTTGAGCAGCAGAAGAGGCAGCAAATATAAAGTTCGACCTGGATGCATCCTCTGAATTTGAAGCAAAACTGAATTGCTTCCTGCCATCGCTATCCTGCCTCTCCAATTTCAAACTTGAACTGGCTTCTGTTTCTTCTGAAATAGCAGCTAGATCACCACTTAAATCCAACTCCTCATTTGCAGATTTGTAGCTTTCAGTATCTGCACCTGAAACAGATTCGTCCACAGGCCCTTCAGCACCCAGGTTTGTATTAGAATGGTAAAGGGAGCCATCATCTCCCTCTACTTCAGTTGCACTCAAACCAGGTTCACTTATATTTAAGCTTTCTGTAGCGTTAAGCAGATCTTCATCTATAACATCATTTAAAACCTCAGGTACTGACTCATCAAATTCAACGGAGTTGTGGTCAAGAACCAGTGATTCATTGGATGTCACAGAATTTTCAGGAGAGATTGGATCACTAGCTAAAGTTTCCTGATATGGCGAAGCATCCATTGGTGAATATGGTTCAGACGCTTTGTCTCTCTCCAGAGGATCCCTGTCCCTTGAAACAAAGTCCCGAGTCTCCTGATCAATGTGCAACTGTACCGTGGTCGGATTATATCTTCCACTCCTACTCTTTGGTCCAAATTCTCTAGTTGGATCCCGCTGTGCATTGAATTGAAATTTTTGAGTCATACCAGCAGAAAAAATGTATGGATTGACATCTGATGTTTCACATTCTACAAAAGATGATCCAGGATTTTCTTGTTTAGTTGTAGAGCGAAAGTAATATGTTTCTTTGTTTCTATTTGTATCTGTCGCTTGAAATGTACTACCAACAGCATTAAATTGTTTATCACTATGAAAAATTGAAG

mRNA sequence

CTTCCACTAAACATGTATATACACGTCAGGAGGAACAGAATGCCAAAAAGATATCATATCCTAGAAAGAACTTTGTTACCTGAGCATTTTGCAAACCGTCAGATGCTTCAACTACAATTTTTCGGTCCACACAGATATCATTTCCAGGCTGCAGGCATCTCTTGAAATATTGTATTGCATTGTCAACTTCCCCAAGGCCAAGATGATTGACCTTGAGCAGCAGAAGAGGCAGCAAATATAAAGTTCGACCTGGATGCATCCTCTGAATTTGAAGCAAAACTGAATTGCTTCCTGCCATCGCTATCCTGCCTCTCCAATTTCAAACTTGAACTGGCTTCTGTTTCTTCTGAAATAGCAGCTAGATCACCACTTAAATCCAACTCCTCATTTGCAGATTTGTAGCTTTCAGTATCTGCACCTGAAACAGATTCGTCCACAGGCCCTTCAGCACCCAGGTACTGACTCATCAAATTCAACGGAGTTGTGGTCAAGAACCAGTGATTCATTGGATGTCACAGAATTTTCAGGAGAGATTGGATCACTAGCTAAAGTTTCCTGATATGGCGAAGCATCCATTGGTGAATATGGTTCAGACGCTTTGTCTCTCTCCAGAGGATCCCTGTCCCTTGAAACAAAGTCCCGAGTCTCCTGATCAATGTGCAACTGTACCGTGGTCGGATTATATCTTCCACTCCTACTCTTTGGTCCAAATTCTCTAGTTGGATCCCGCTGTGCATTGAATTGAAATTTTTGAGTCATACCAGCAGAAAAAATGTATGGATTGACATCTGATGTTTCACATTCTACAAAAGATGATCCAGGATTTTCTTGTTTAGTTGTAGAGCGAAAGTAATATGTTTCTTTGTTTCTATTTGTATCTGTCGCTTGAAATGTACTACCAACAGCATTAAATTGTTTATCACTATGAAAAATTGAAG

Coding sequence (CDS)

ATGGCGAAGCATCCATTGGTGAATATGGTTCAGACGCTTTGTCTCTCTCCAGAGGATCCCTGTCCCTTGAAACAAAGTCCCGAGTCTCCTGATCAATGTGCAACTGTACCGTGGTCGGATTATATCTTCCACTCCTACTCTTTGGTCCAAATTCTCTAG

Protein sequence

MAKHPLVNMVQTLCLSPEDPCPLKQSPESPDQCATVPWSDYIFHSYSLVQIL
Homology
The following BLAST results are available for this feature:
BLAST of Cmc05g0123571.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc05g0123571.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc05g0123571.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc05g0123571.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc05g0123571Cmc05g0123571gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0123571.1-exonCmc05g0123571.1-exon-CMiso1.1chr05:1188914..1189396exon
Cmc05g0123571.1-exonCmc05g0123571.1-exon-CMiso1.1chr05:1189528..1189780exon
Cmc05g0123571.1-exonCmc05g0123571.1-exon-CMiso1.1chr05:1191296..1191497exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0123571.1-three_prime_utrCmc05g0123571.1-three_prime_utr-CMiso1.1chr05:1188914..1189132three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0123571.1-cdsCmc05g0123571.1-cds-CMiso1.1chr05:1189133..1189291CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc05g0123571.1-five_prime_utrCmc05g0123571.1-five_prime_utr-CMiso1.1chr05:1189292..1189396five_prime_UTR
Cmc05g0123571.1-five_prime_utrCmc05g0123571.1-five_prime_utr-CMiso1.1chr05:1189528..1189780five_prime_UTR
Cmc05g0123571.1-five_prime_utrCmc05g0123571.1-five_prime_utr-CMiso1.1chr05:1191296..1191497five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc05g0123571.1Cmc05g0123571.1-proteinpolypeptide