Cmc04g0120741.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCTCGGTTCCTCGAAGCTAAATGGGCTGGGCCGGTAAGTAAACTTCTGAAAATGCAAAATATCTCCGACAGCGAGAGTGGTTTCAGCTCCATTTCTTCCCGATGGCTGCAATCAACCTTCCTCTAATCCACACTCCTCCATCTATTCAGATTTCTTCAATCAAACCTTCCCAAAACACTTCCAAATTCTTCCTGTTCTCTCAATCTAATCCTTCTCCTCTCCTTTCCAGTTCCTTCAAGCTCTGCAGTACACCCACAGCTCGCGCTTCTTCCTTAATCGCTTTTGCTGCCAAGAATCTCTCGGAATCCGAGCTCAACTCAGTGCCGGAGACCGCCGGGGAAATTGCTGGGAAATTTCCTTCTGACGCCGGTGTTTATGCCGTTTACGATAAGGAGGGCGATGTTCAGTTCATCGGCATTACAAGAAACATAGCGGGGAGCGTCGCCACTCACTGGAAATCAGTACCGGAGCTCTGCGTTTCCGTCAAGGTTGGGACGCCTTTTGCTGTTGTTTCTTTCTCATTTTCTCATTTTCTCATTTTCTCATTTTCAGCCATAATTGATTGTTGGTAGGGTTTATTTGAGGTTATTGCTTAGTGTGATGCATGATGAATTGAACATGAGGGTGCTACACTCTGTTGAGTACAGATATTCTTCGTTTGGAAGTAATCTCGAAACGTTTCATTTGTTCTTGCGAAAAATTCTGTGCACATGAATTCATTATTGTCTCCAATGAACTGATGCCTCAACTTTTTTATCGAGTTTTGGATACTTAATCTAGTCTAGGCTTCTTAGTTTTCGTCGGTATTGTAATGATACATCTGCGTCATATTCATGTGGTATTCTTCATGCTCTGCTGCTGATAGTTGTTCATCATCAGTGCATTGGTTAAAAATTGAAAAGGCGTAGAAGTATAAGAAAGCTGGAACTAGAATCAGGGGAATTCGTGCAAATTGAAATTTAACGTTGGGAGATAATCATTCACTTGATGGACACGGGGAAATTTGTTTTTCACTTGCTGCTCTTGCAATCTTATAGTTCTTTAGACTTTGCTTAATTGTTTGAACATATATTTCAACATGTTATGGTTGGTAGCTGACATCAAATCGCTGGCAGTTTCATGCTGACTACAATTCATTAACTTTTCTTAAAAAAGAGGGTGCATTTATCAGCTTTCTAAATTAGGACCTTCCGAGTGGCAGTTACTCTTTACAAGATCGTTTTGGTTGTGCAATAGGTATATCTCCTTATGGATGAACGTATATAGGATTGATACTCCTTTTTGCACACCTTGAATATGTCCGTTGTGGAAACTCATAGAATATTAAATTGTAAGTAAGTGGCCACCAATGTTTGTACTCATTCCCCATTTATTAGAACATATGCTTGATAATTATCAGCCTACCTTACTCTACATATTTTAATGCATTTGATTCTCATGTGAATTAAACTTCTAATGTAAATAGGGATCCGAGGAACCTAAATTAACTCAAAAGAAGTAGGAATAGTTTTAGCCTTTAGGAAGCATATTATGATTGAGAGGTACTGTGCTACTTTATCTATTCTCTTGATGAGGAGTTGTGCTAGAATTCGAGTTTTCTGTGCAGTAGAATTCTGATCTTACCTGATTTTTTAATTTTGAATGTTTCCTTTCTGTAGTTTGGAATAGTAGATGAACCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAATTCACTGGGAAGGTACCACCAGGTAATGAATCTGGCAATGCAACATGGGTAAGGGAGCGACCAAAGAAGAAAGCCGATCTGAGGTTGACGCCTGGTCGACATGTCCAACTTACAGTCCCATTGGAAGAACTCATCGATCAATTAGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGCTCAAGAAGCGCACCAATGTGTGGCTTTTCGCAAAGGGTAATAGGGATTCTTGAAACTGAAGGCGTAGACTACGAGAGTGTTGATGTGCTCGATGAAGAATACAACAATGGGCTAAGGGAAACTCTCAAAACGTATAGTAACTGGCCTACGTTTCCTCAAATCTTCGTGGATGGGCAATTAATTGGAGGTTGTGACATTCTTAGTTCTATGCATGAAAAAGGTGAACTTACTGGTTTGTTCAAGAAGTGATTATCAAATTTGAACTTTCAGCAACCAATGTTTTGGTGGAGTGAGAGGCATAATTGGAAGGAGGTGAGATTGTGCCTGCTTTCCATGCTTTTGCCAGATGCTCCATAGAAGTGTAGTTTAAAGTTTCATCAAGTTGAACAAACTAATTTGTTAAAAGCCTTTTCTCCCTCTTCTTATTTCCTCTCAAAGCAAGACCTGAAGATTTGGGGATTTTGAAATTGTTTATTTTAACTTCAAAATTAGTAGATGGTTTAAGCTTGAAATCAATAGAATTTGACAAATTTTAGAATTAGATATCTCAAATCCTAGATTTGAAGAAATATATGGTGTTAAAAAAAAAAAAAGTTGTGGTGTAAGAGAAATTTATGTTGATGTCGAGATGTGGCC GCTCTCGGTTCCTCGAAGCTAAATGGGCTGGGCCGGTAAGTAAACTTCTGAAAATGCAAAATATCTCCGACAGCGAGAGTGGTTTCAGCTCCATTTCTTCCCGATGGCTGCAATCAACCTTCCTCTAATCCACACTCCTCCATCTATTCAGATTTCTTCAATCAAACCTTCCCAAAACACTTCCAAATTCTTCCTGTTCTCTCAATCTAATCCTTCTCCTCTCCTTTCCAGTTCCTTCAAGCTCTGCAGTACACCCACAGCTCGCGCTTCTTCCTTAATCGCTTTTGCTGCCAAGAATCTCTCGGAATCCGAGCTCAACTCAGTGCCGGAGACCGCCGGGGAAATTGCTGGGAAATTTCCTTCTGACGCCGGTGTTTATGCCGTTTACGATAAGGAGGGCGATGTTCAGTTCATCGGCATTACAAGAAACATAGCGGGGAGCGTCGCCACTCACTGGAAATCAGTACCGGAGCTCTGCGTTTCCGTCAAGTTTGGAATAGTAGATGAACCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAATTCACTGGGAAGGTACCACCAGGTAATGAATCTGGCAATGCAACATGGGTAAGGGAGCGACCAAAGAAGAAAGCCGATCTGAGGTTGACGCCTGGTCGACATGTCCAACTTACAGTCCCATTGGAAGAACTCATCGATCAATTAGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGCTCAAGAAGCGCACCAATGTGTGGCTTTTCGCAAAGGGTAATAGGGATTCTTGAAACTGAAGGCGTAGACTACGAGAGTGTTGATGTGCTCGATGAAGAATACAACAATGGGCTAAGGGAAACTCTCAAAACGTATAGTAACTGGCCTACGTTTCCTCAAATCTTCGTGGATGGGCAATTAATTGGAGGTTGTGACATTCTTAGTTCTATGCATGAAAAAGGTGAACTTACTGGTTTGTTCAAGAAGTGATTATCAAATTTGAACTTTCAGCAACCAATGTTTTGGTGGAGTGAGAGGCATAATTGGAAGGAGGTGAGATTGTGCCTGCTTTCCATGCTTTTGCCAGATGCTCCATAGAAGTGTAGTTTAAAGTTTCATCAAGTTGAACAAACTAATTTGTTAAAAGCCTTTTCTCCCTCTTCTTATTTCCTCTCAAAGCAAGACCTGAAGATTTGGGGATTTTGAAATTGTTTATTTTAACTTCAAAATTAGTAGATGGTTTAAGCTTGAAATCAATAGAATTTGACAAATTTTAGAATTAGATATCTCAAATCCTAGATTTGAAGAAATATATGGTGTTAAAAAAAAAAAAAGTTGTGGTGTAAGAGAAATTTATGTTGATGTCGAGATGTGGCC ATGGCTGCAATCAACCTTCCTCTAATCCACACTCCTCCATCTATTCAGATTTCTTCAATCAAACCTTCCCAAAACACTTCCAAATTCTTCCTGTTCTCTCAATCTAATCCTTCTCCTCTCCTTTCCAGTTCCTTCAAGCTCTGCAGTACACCCACAGCTCGCGCTTCTTCCTTAATCGCTTTTGCTGCCAAGAATCTCTCGGAATCCGAGCTCAACTCAGTGCCGGAGACCGCCGGGGAAATTGCTGGGAAATTTCCTTCTGACGCCGGTGTTTATGCCGTTTACGATAAGGAGGGCGATGTTCAGTTCATCGGCATTACAAGAAACATAGCGGGGAGCGTCGCCACTCACTGGAAATCAGTACCGGAGCTCTGCGTTTCCGTCAAGTTTGGAATAGTAGATGAACCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAATTCACTGGGAAGGTACCACCAGGTAATGAATCTGGCAATGCAACATGGGTAAGGGAGCGACCAAAGAAGAAAGCCGATCTGAGGTTGACGCCTGGTCGACATGTCCAACTTACAGTCCCATTGGAAGAACTCATCGATCAATTAGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGCTCAAGAAGCGCACCAATGTGTGGCTTTTCGCAAAGGGTAATAGGGATTCTTGAAACTGAAGGCGTAGACTACGAGAGTGTTGATGTGCTCGATGAAGAATACAACAATGGGCTAAGGGAAACTCTCAAAACGTATAGTAACTGGCCTACGTTTCCTCAAATCTTCGTGGATGGGCAATTAATTGGAGGTTGTGACATTCTTAGTTCTATGCATGAAAAAGGTGAACTTACTGGTTTGTTCAAGAAGTGA MAAINLPLIHTPPSIQISSIKPSQNTSKFFLFSQSNPSPLLSSSFKLCSTPTARASSLIAFAAKNLSESELNSVPETAGEIAGKFPSDAGVYAVYDKEGDVQFIGITRNIAGSVATHWKSVPELCVSVKFGIVDEPDRTTLTQAWKSWMEEHIKFTGKVPPGNESGNATWVRERPKKKADLRLTPGRHVQLTVPLEELIDQLVKENKVVAFIKGSRSAPMCGFSQRVIGILETEGVDYESVDVLDEEYNNGLRETLKTYSNWPTFPQIFVDGQLIGGCDILSSMHEKGELTGLFKK Homology
BLAST of Cmc04g0120741.1 vs. NCBI nr
Match: XP_008442396.1 (PREDICTED: bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucumis melo] >KAA0044185.1 bifunctional monothiol glutaredoxin-S16 [Cucumis melo var. makuwa] >TYK24947.1 bifunctional monothiol glutaredoxin-S16 [Cucumis melo var. makuwa]) HSP 1 Score: 594.0 bits (1530), Expect = 7.3e-166 Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. NCBI nr
Match: XP_004137706.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucumis sativus] >KGN58741.1 hypothetical protein Csa_001627 [Cucumis sativus]) HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-154 Identity = 276/296 (93.24%), Postives = 282/296 (95.27%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. NCBI nr
Match: XP_022949016.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita moschata] >KAG6596337.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027889.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 540.8 bits (1392), Expect = 7.3e-150 Identity = 269/295 (91.19%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. NCBI nr
Match: XP_022971349.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita maxima]) HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149 Identity = 269/295 (91.19%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. NCBI nr
Match: XP_038906340.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Benincasa hispida]) HSP 1 Score: 539.7 bits (1389), Expect = 1.6e-149 Identity = 267/295 (90.51%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy Swiss-Prot
Match: Q8H7F6 (Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS16 PE=1 SV=2) HSP 1 Score: 366.7 bits (940), Expect = 2.5e-100 Identity = 189/296 (63.85%), Postives = 231/296 (78.04%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy Swiss-Prot
Match: Q2QX01 (Monothiol glutaredoxin-S12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS12 PE=2 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 3.5e-86 Identity = 165/264 (62.50%), Postives = 196/264 (74.24%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy Swiss-Prot
Match: Q0IWL9 (Monothiol glutaredoxin-S11 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS11 PE=2 SV=2) HSP 1 Score: 113.6 bits (283), Expect = 3.8e-24 Identity = 48/102 (47.06%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy Swiss-Prot
Match: Q6PBM1 (Glutaredoxin-related protein 5, mitochondrial OS=Danio rerio OX=7955 GN=glrx5 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.5e-24 Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy Swiss-Prot
Match: Q68W05 (Probable monothiol glutaredoxin 2 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=grxC2 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.2e-22 Identity = 44/99 (44.44%), Postives = 70/99 (70.71%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy TrEMBL
Match: A0A5D3DMV3 (Bifunctional monothiol glutaredoxin-S16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00630 PE=3 SV=1) HSP 1 Score: 594.0 bits (1530), Expect = 3.5e-166 Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy TrEMBL
Match: A0A1S3B6C9 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486275 PE=3 SV=1) HSP 1 Score: 594.0 bits (1530), Expect = 3.5e-166 Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy TrEMBL
Match: A0A0A0LF87 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731030 PE=3 SV=1) HSP 1 Score: 555.8 bits (1431), Expect = 1.1e-154 Identity = 276/296 (93.24%), Postives = 282/296 (95.27%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy TrEMBL
Match: A0A6J1GAT7 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452232 PE=3 SV=1) HSP 1 Score: 540.8 bits (1392), Expect = 3.5e-150 Identity = 269/295 (91.19%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. ExPASy TrEMBL
Match: A0A6J1I8B1 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470101 PE=3 SV=1) HSP 1 Score: 540.0 bits (1390), Expect = 6.0e-150 Identity = 269/295 (91.19%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. TAIR 10
Match: AT2G38270.1 (CAX-interacting protein 2 ) HSP 1 Score: 366.7 bits (940), Expect = 1.8e-101 Identity = 189/296 (63.85%), Postives = 231/296 (78.04%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. TAIR 10
Match: AT3G54900.1 (CAX interacting protein 1 ) HSP 1 Score: 105.5 bits (262), Expect = 7.3e-23 Identity = 48/100 (48.00%), Postives = 67/100 (67.00%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. TAIR 10
Match: AT4G04950.1 (thioredoxin family protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-22 Identity = 52/125 (41.60%), Postives = 75/125 (60.00%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. TAIR 10
Match: AT3G15660.1 (glutaredoxin 4 ) HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19 Identity = 39/99 (39.39%), Postives = 68/99 (68.69%), Query Frame = 0
BLAST of Cmc04g0120741.1 vs. TAIR 10
Match: AT3G15660.2 (glutaredoxin 4 ) HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19 Identity = 39/99 (39.39%), Postives = 68/99 (68.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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