Cmc04g0120441.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc04g0120441.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 36002430 .. 36006211 (-)
Sequence length1234
RNA-Seq ExpressionCmc04g0120441.1
SyntenyCmc04g0120441.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGAAGATGACAGGCTTTAATTATCAACTTATCAACCGTCCTCAGTAACGTGCTTTCATAACATGTCTCGGTCATAAATATTGATGATCTAAAAGTTCTGTCAATTATTTACTCAATCAAACATCTTAGTACACATGTCTAAGTCATAAATATTGATGATCTAACAGTTTTGTTAATCATTAACTCAATCAAACATCTTACTTCTGCGGTACGATACTCAGCGCAGCACACCAAGGTAGAAACAGGACAAAAGGAATAGAATATTTCAGAATAACAAGAAAGGATAGCTGAAATTTAACCTTGGAAGTGACAAAATAGCACATTACTAGGCAGCCTTCAGCGACCTACGGCGTACGCAATAGGCAATGTGGAGACTTCTCAATGGTAACGTGCTTTCTTAACATTTTAACCCTTCATAAATATTGTTGATCTAAAAGTTCTGTTAATTATTAACTCAATCACAATCATGTTACTTATGGAATAAATTTAGTCTCGAAAACAAAACAATATATGAGTATAGCAAGAAAGGGTACTTGAAATTTGAGAATGTATCCTTTATACGAAACTAAACAAATATTTGAAATCTGCCATTACCAATAATCTTTTCATACCATTGCAGTCCAGATTCGCCAATGAACCAATTTTCGTAATCTTTGTATTTACATCCTGTCGTGAACAAAACAAATAACCATTCAAACTAATATAAAAGCAAAGTTACGAGGATCTATAATAGAGGACAATATTGAAATGAAATTCATTTGTCTTACCCAGTAATATACTATAGTGTAGTGAATAGATCGTATTTACAACTCCCAACATCAGCTTCCATACACCTAGTTGGGTCCCAGAAAGTTGAAATCTTCTTGGGGAACAACATAGAACAGAACTAAAATTGAAATCTTGGAAGTCAGAATAACGTTGTGATGCTAAAGCAGTCTTAAACTGGAGAGGAACTTCTTCAGGGTTTTATGACCCCATGTTATGTCATTTTGAACAATATCGTTGTTGATTTCCTGCAAATCAGATTGATTCTCAGTTGTATTTGTGTCATCCTCTTGTCTAATTTCTTCATAACTTGACTTTGTCTCCATCTCTTGTCCAGCCACAACCTCAGGATCCTTTTGTATGTTCTGAGACTAATACAAATGAAATATGAGGCATATGAACATTATATAACGTAGTACACATCAGTAGATGAAGTTGAATCAAGGTGTGGTTTTAGTGAATATATTGGCCAAGAAGTGTCTAAAAGTTTAATTTAGTGAATTGTAGTCCCATCCCATGCTTCCAGAGTGTGCTTTTAGTTGCTATCAAACATTAGGTGGCCACAGGTTTATTTGCACTTTAATAATTTGAAGAGGTAATGTAGTGTATAATTTATTATTAAGCAATCAGTAAATGATTTCAAACAAACTCTTGAAAAGCTATGTCGACATTTGATGGCAGGGAAATTGTATGGTTCCATGATAAGTTGGTAAGAAAGAAGCAAAATAGAACTAAGATATCAAAATTGAAATTATTAGGCCATAAGACTGTGACAGCAATAGTACAATACGTGGTCAATGTCAAGTTTCATCTCTTTCATATAATGCTTCGGAAACATTTAAGCTATCAAAGCTACGTCCACTGTATTTAGGATCTCTTTCGAAAGTACAATACATGGTGCACACAGATTGAAAGGACGATTATTGTAGTAACAAGAGTTGAAGCAGGAAAGAAATGGTAAAAGTAGGTCAGGCCATCAAGCTGTTACCTCAGGTAGTTTATGATCGTTAGATTCATTTATCCCACTGACAGAACCATCACCTTCGACTTGGGGAGGTAAACCAGGAACTAGAATGGGAACTTGATCGTCAACAGAGCTTTCTTGAACTCCATCATCTTGTGCATCGTTCTCCAAAATTTCCTTGGTTATCTCATTTGAATCGGAAATGCTGCTACCATTACCCCCTGGAAGAGAGACGTTACTGATATTCTCTTCAGAAGCAGAGATATTACAGCCATTTTCTTCTAAAGCTGGGATGTTACTGCCATCAATCGATTCCACCGATTCTTTATGTGCTATTGAATCCTTATTTGTATTGGGGATCAGTTCTTCATTTGGATAAGTGAGGTTGTACTCAACCATTAAATTTTCTGGGGCAATGGGAGAATACTCCTCCTGGTTAACAATTTTTTCTTCTTCACTAAGTATCCGCGATTCAGCACTATCCCAATCTTCAGAAACAATGATTGTATTCGATGTTTCCCAGGGTTGAAATGTTCGATCAGGACCGGGTTGCCATTCGACATTTCCAGTTATTCCTTGAAGTATGAATTTGAACTGGATTATTTTCCCTACGGGAATATCCTAATTTCAAAAAGAAAGAAAAGAACATAACAAGATATTAGAAAGGCGATGAAACTTATTTCTTCATATCAAGACTTTTACGTTCTTCACGAGTCTCTACACTCACCACTTCTGCTGCCCATTGATGCCCATCGGCCCAGTTTAAAGGTATTGCACTTGTAACGTCCCAGGAACCGAAAATTGGATCATCACCTACTACAAAGAAATGCTCCCCGAATGTGCACTCTTTCTGTAGCTGGAATTTGACACGGACAGTCTTTGATTGATCTGCATAAAAGATGTCGATATGGAAATTTTAGGCTATTTTCCCAGAGGAAGTAATTATTTATCATCAATCGTCTTGACTTACCTGTTTCTTGATTCTCAAGAGCATCACTCTGATTAATATCTGCCTGCAAAGAACAAGTTCTACGAATATCAGGATGATTTTATTAGCATATATACATCCTTGAAACAATCTTTTTCACATTACTTCCTAGATTTTCTGGCAATAATTATCTCTTTCTTATTGAGGCATCCGCCGAGACTTTATTACCCATTCTAAACTTCCGAAGTTTTTATTAATCTTGCTTTGAATTACAGGACAAGGAGACTTCGTTCGAAAACTCAAAATCGAAGGCCTATCTTTCACCGACTTTCATATTAACAAATTCGCATCTTAGAATGCTCCTTATCAAAGATGAAACTCCCGATCACTCATCCAGAATCCATAAATAAGCACAAAAAAAAAAAAAAAAAAAACAGCCAAGAATGCTTCCACAGCTTATCTCTCGTTCGCACATTGAGAATCTATAAGTAATTAAAGGCGGTGAAGAAAATAATTCTTAGCAATCCAAGATTCTTCAAGAAAAAAAAAAAAAACATATGAAACCATAAGAGAAGAATCGCAAAGAAAGAATAATTTCCAATACCGACGACCTGCTGATATGAAGAGAAGCAAGAAATGAAGTCAATGCCTCCACGACGCAAAGGTACGAAATGCTGAAGTCCAGAATTAGCCAATTTCCATGGCCTCCGATAAGAGATGAATTCAGGTCCTCGAGAAAGAAGACGCTCTTTTATAGAAGAAGAAGAAGAAGAAGAAGAGAAGTAAGAAGAAGGTGAATAGTTGGCGATGATGGAGTTGGAGGTCTCTAGGGTTTTCATCACTCTTCACTCTCAGAATCTCACTTTGCCACTGACAATGACAATTACAAACAGTCTCAAGAGCTTAAGCCTCGCGCCTTTGGCTTTGATGGAGTTTCTGGTGGTTACCATTATATAGCGGTGGGACCTTGCGAGGATAAGGGAAAATAATTTCTCACGTGCATCATCCAAAACTGACACGTGTTCCAACTACCCATCGAATCACGTAGCTCATGCCTTATGGTAAATTCATGTTAGCCATTCAATGCCAACTCTTTTAGGGCCATAGCTCTTGAATTAGACGTC

mRNA sequence

TGAGAAGATGACAGGCTTTAATTATCAACTTATCAACCGTCCTCAGTAACGTGCTTTCATAACATGTCTCGGTCATAAATATTGATGATCTAAAAGTTCTGTCAATTATTTACTCAATCAAACATCTTAGTACACATGTCTAAGTCATAAATATTGATGATCTAACAGTTTTGTTAATCATTAACTCAATCAAACATCTTACTTCTGCGGTACGATACTCAGCGCAGCACACCAAGGTAGAAACAGGACAAAAGGAATAGAATATTTCAGAATAACAAGAAAGGATAGCTGAAATTTAACCTTGGAAGTGACAAAATAGCACATTACTAGGCAGCCTTCAGCGACCTACGGCGTACGCAATAGGCAATGTGGAGACTTCTCAATGGACAAGGAGACTTCGTTCGAAAACTCAAAATCGAAGGCCTATCTTTCACCGACTTTCATATTAACAAATTCGCATCTTAGAATGCTCCTTATCAAAGATGAAACTCCCGATCACTCATCCAGAATCCATAAATAAGCACAAAAAAAAAAAAAAAAAAAACAGCCAAGAATGCTTCCACAGCTTATCTCTCGTTCGCACATTGAGAATCTATAAGTAATTAAAGGCGGTGAAGAAAATAATTCTTAGCAATCCAAGATTCTTCAAGAAAAAAAAAAAAAACATATGAAACCATAAGAGAAGAATCGCAAAGAAAGAATAATTTCCAATACCGACGACCTGCTGATATGAAGAGAAGCAAGAAATGAAGTCAATGCCTCCACGACGCAAAGGTACGAAATGCTGAAGTCCAGAATTAGCCAATTTCCATGGCCTCCGATAAGAGATGAATTCAGGTCCTCGAGAAAGAAGACGCTCTTTTATAGAAGAAGAAGAAGAAGAAGAAGAGAAGTAAGAAGAAGGTGAATAGTTGGCGATGATGGAGTTGGAGGTCTCTAGGGTTTTCATCACTCTTCACTCTCAGAATCTCACTTTGCCACTGACAATGACAATTACAAACAGTCTCAAGAGCTTAAGCCTCGCGCCTTTGGCTTTGATGGAGTTTCTGGTGGTTACCATTATATAGCGGTGGGACCTTGCGAGGATAAGGGAAAATAATTTCTCACGTGCATCATCCAAAACTGACACGTGTTCCAACTACCCATCGAATCACGTAGCTCATGCCTTATGGTAAATTCATGTTAGCCATTCAATGCCAACTCTTTTAGGGCCATAGCTCTTGAATTAGACGTC

Coding sequence (CDS)

ATGATGGAGTTGGAGGTCTCTAGGGTTTTCATCACTCTTCACTCTCAGAATCTCACTTTGCCACTGACAATGACAATTACAAACAGTCTCAAGAGCTTAAGCCTCGCGCCTTTGGCTTTGATGGAGTTTCTGGTGGTTACCATTATATAG

Protein sequence

MMELEVSRVFITLHSQNLTLPLTMTITNSLKSLSLAPLALMEFLVVTII
Homology
The following BLAST results are available for this feature:
BLAST of Cmc04g0120441.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc04g0120441.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc04g0120441.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc04g0120441.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc04g0120441Cmc04g0120441gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0120441.1-exonCmc04g0120441.1-exon-CMiso1.1chr04:36002430..36003278exon
Cmc04g0120441.1-exonCmc04g0120441.1-exon-CMiso1.1chr04:36005827..36006211exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0120441.1-three_prime_utrCmc04g0120441.1-three_prime_utr-CMiso1.1chr04:36002430..36002596three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0120441.1-cdsCmc04g0120441.1-cds-CMiso1.1chr04:36002597..36002746CDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0120441.1-five_prime_utrCmc04g0120441.1-five_prime_utr-CMiso1.1chr04:36002747..36003278five_prime_UTR
Cmc04g0120441.1-five_prime_utrCmc04g0120441.1-five_prime_utr-CMiso1.1chr04:36005827..36006211five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc04g0120441.1Cmc04g0120441.1-proteinpolypeptide