Cmc04g0119941.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc04g0119941.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr04: 35784488 .. 35786360 (+)
Sequence length1873
RNA-Seq ExpressionCmc04g0119941.1
SyntenyCmc04g0119941.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCTCTCCCATCTTCATAGCACACATTGTACGGACCCAAAAAAAAAATTCGCTTGTGGTTAATTGATTATCCTTTATGGAAAGCAGGGTAAAATTGGAATTTTAACTGTGATTTATAACCATGTCATATTCGAGGTATTTTGAAAAGAACAATATTGGAGTTCCAAATCAGATTGAAATTTGAAATTCTGTTTCTTTTTACTAAAGCCAAAAGGCCGTAAATGATTTGAATTTTGTGGCCTAAATCAAAGATAGGGTTGGAAGCATAGGTAAGAAAATAACGTACCCCAGACATGGCAAGGAATGATTGGACTGTAGAATGGACTGAAAATGATGGTTGGGCATTGCACGCAAATGTTAGTGTACTCAATTTTACTTTATAAATTTTTGATCAGTTAAAAATTCATGATTAAAACTTACAAAAGCTTGGAATAGGCCGAAGCATATCTTAAGCGTCACATATTCTTTCATTCTTGAAAACACTCTTTGTAAGAGCAAACATAATCAAGATTTTATTAATTCCCTAAAAGCAGAACATAGTGATAATCATTTTATTGTTTTTCTTTTTCTTTCTTATTTCAACCTTTAGTATTATTATTATTGTTTTGATATGCTTCATATGATCTTATGAGATTTTAATGTCCAGAAATTTGGACAACTCTGGCCATGGGCTTCCTAAATTGGTATTTAGGCACAGTGACCGTCAATACTCCGTTATACATTTCTGCCCTCACCTTATCTACATCGGCACCCTCCGGCAACACAATACGCCGGTAGATCCTTCCACTGCTTCGTTCCACACGACGCCAAATATCGATTCTCTCCTCTCTCTCAGCCCTAATTTCAGTGCTGATACACAGAGCTCCATTGTCTTCAATCTCCAGTTTCATTTCATGTTTTTTCACTCCGGGAAGATCTAACTTGAAAACGTATGCATCAGCGGTTTCCTTCCAGTCAATCTGAGCGTTTATGGCAGCAGAGGAATTTGGAGCAATGGAAGATCGGAAGGAATCAACTGGAACCACATCTTTCTCCGGAAATTGCCTGTAAGAATGGCGGTCTTCCACGTAGTACCGTTCCTTTCGATCGTCAAAGAATTTGTCAAACGCTCGTCGATCCTCGCCCTGGTAGCGTTCTTTTCGATCTTCAGGGCACTTTTCGCAGCCGGATCGATCCTCAACGTAGTATTGTTCCTTGCGATTGGTGGGGAAGAAGCTGCTGATCAAACGCGTCGACATTTTTTTTTTTTAAAGAGATTCAAATGTGTTGTGTGTGTAGTGAATTTGTTGCTTGCAGGTGAAGAAGGGATTGAGGTGTTGAATTTATAGGAGAGGAGGGATTACAAAGAGATAACATAATTTAGTGAAGTGGAATCGATTCCAGTGTTGATGGAAATCGCAATCGATTGATTATTCTTTGAAGTTTCTTTTTTTCAAAGATGGGTTTCAATCAAATCAATTCATGAATTTGTTCCCTTTGGATTGAAGTGACTTTGCTCAACCTCCCACTCCCAATGTATTGAGTGTTGTAATGAAGATATATAGGAATGGAATGGCAGCGCGTCGGAAGAAGATTGGACATGAAAGGGAATTGAATTCATCAGGGGAAGAGAATTTTGATTCCGAGTGGTCATTCATGAGATCATTACGAATTTTTCTCACCACTTGCTCATCGTCAACACACCAACACGCTACCCATATTCACCTCTGTGCTTGTAGCTATGGTTTATCTCTTGCCCATGGGCCTTCCCATAAGTTCACATTCATATAATTGTTATTAATACTTTATTCTAAAAATCAATGCATAGTACAAATTTCAAATTTTTTTATTAGTTAGTATTTTAGATTGATTCAACTGTTTGTCTTAGTTTTGT

mRNA sequence

GATCTCTCCCATCTTCATAGCACACATTGTACGGACCCAAAAAAAAAATTCGCTTGTGGTTAATTGATTATCCTTTATGGAAAGCAGGGTAAAATTGGAATTTTAACTGTGATTTATAACCATGTCATATTCGAGGTATTTTGAAAAGAACAATATTGGAGTTCCAAATCAGATTGAAATTTGAAATTCTGTTTCTTTTTACTAAAGCCAAAAGGCCGTAAATGATTTGAATTTTGTGGCCTAAATCAAAGATAGGGTTGGAAGCATAGGTAAGAAAATAACGTACCCCAGACATGGCAAGGAATGATTGGACTGTAGAATGGACTGAAAATGATGGTTGGGCATTGCACGCAAATGTTAGTGTACTCAATTTTACTTTATAAATTTTTGATCAGTTAAAAATTCATGATTAAAACTTACAAAAGCTTGGAATAGGCCGAAGCATATCTTAAGCGTCACATATTCTTTCATTCTTGAAAACACTCTTTGTAAGAGCAAACATAATCAAGATTTTATTAATTCCCTAAAAGCAGAACATAGTGATAATCATTTTATTGTTTTTCTTTTTCTTTCTTATTTCAACCTTTAGTATTATTATTATTGTTTTGATATGCTTCATATGATCTTATGAGATTTTAATGTCCAGAAATTTGGACAACTCTGGCCATGGGCTTCCTAAATTGGTATTTAGGCACAGTGACCGTCAATACTCCGTTATACATTTCTGCCCTCACCTTATCTACATCGGCACCCTCCGGCAACACAATACGCCGGTAGATCCTTCCACTGCTTCGTTCCACACGACGCCAAATATCGATTCTCTCCTCTCTCTCAGCCCTAATTTCAGTGCTGATACACAGAGCTCCATTGTCTTCAATCTCCAGTTTCATTTCATGTTTTTTCACTCCGGGAAGATCTAACTTGAAAACGTATGCATCAGCGGTTTCCTTCCAGTCAATCTGAGCGTTTATGGCAGCAGAGGAATTTGGAGCAATGGAAGATCGGAAGGAATCAACTGGAACCACATCTTTCTCCGGAAATTGCCTGTAAGAATGGCGGTCTTCCACGTAGTACCGTTCCTTTCGATCGTCAAAGAATTTGTCAAACGCTCGTCGATCCTCGCCCTGGTAGCGTTCTTTTCGATCTTCAGGGCACTTTTCGCAGCCGGATCGATCCTCAACGTAGTATTGTTCCTTGCGATTGGTGGGGAAGAAGCTGCTGATCAAACGCGTCGACATTTTTTTTTTTTAAAGAGATTCAAATGTGTTGTGTGTGTAGTGAATTTGTTGCTTGCAGGTGAAGAAGGGATTGAGGTGTTGAATTTATAGGAGAGGAGGGATTACAAAGAGATAACATAATTTAGTGAAGTGGAATCGATTCCAGTGTTGATGGAAATCGCAATCGATTGATTATTCTTTGAAGTTTCTTTTTTTCAAAGATGGGTTTCAATCAAATCAATTCATGAATTTGTTCCCTTTGGATTGAAGTGACTTTGCTCAACCTCCCACTCCCAATGTATTGAGTGTTGTAATGAAGATATATAGGAATGGAATGGCAGCGCGTCGGAAGAAGATTGGACATGAAAGGGAATTGAATTCATCAGGGGAAGAGAATTTTGATTCCGAGTGGTCATTCATGAGATCATTACGAATTTTTCTCACCACTTGCTCATCGTCAACACACCAACACGCTACCCATATTCACCTCTGTGCTTGTAGCTATGGTTTATCTCTTGCCCATGGGCCTTCCCATAAGTTCACATTCATATAATTGTTATTAATACTTTATTCTAAAAATCAATGCATAGTACAAATTTCAAATTTTTTTATTAGTTAGTATTTTAGATTGATTCAACTGTTTGTCTTAGTTTTGT

Coding sequence (CDS)

ATGCATCAGCGGTTTCCTTCCAGTCAATCTGAGCGTTTATGGCAGCAGAGGAATTTGGAGCAATGGAAGATCGGAAGGAATCAACTGGAACCACATCTTTCTCCGGAAATTGCCTGTAAGAATGGCGGTCTTCCACGTAGTACCGTTCCTTTCGATCGTCAAAGAATTTGTCAAACGCTCGTCGATCCTCGCCCTGGTAGCGTTCTTTTCGATCTTCAGGGCACTTTTCGCAGCCGGATCGATCCTCAACGTAGTATTGTTCCTTGCGATTGGTGGGGAAGAAGCTGCTGA

Protein sequence

MHQRFPSSQSERLWQQRNLEQWKIGRNQLEPHLSPEIACKNGGLPRSTVPFDRQRICQTLVDPRPGSVLFDLQGTFRSRIDPQRSIVPCDWWGRSC
Homology
The following BLAST results are available for this feature:
BLAST of Cmc04g0119941.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc04g0119941.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc04g0119941.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc04g0119941.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc04g0119941Cmc04g0119941gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0119941.1-exonCmc04g0119941.1-exon-CMiso1.1chr04:35784488..35786360exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0119941.1-five_prime_utrCmc04g0119941.1-five_prime_utr-CMiso1.1chr04:35784488..35785418five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0119941.1-cdsCmc04g0119941.1-cds-CMiso1.1chr04:35785419..35785709CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc04g0119941.1-three_prime_utrCmc04g0119941.1-three_prime_utr-CMiso1.1chr04:35785710..35786360three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc04g0119941.1Cmc04g0119941.1-proteinpolypeptide