Cmc04g0115031.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCTTCCGTCATCGTTGGCTTTTAACTCAACCTCCCGTTTCTCGTCAGAACTGTAAACTGAAGACGGAACCCGCGAATTCGTTGCCGATCAAAGATCTTCGGAGCGAGCTTGAGTCCAGACATGGGTACTAGAGAAGTTTACGAACAGAGGCTAAGAAGTGGCAATCTGTACCATGAACCCACTATGAATCCTGGGCTCGGATCGCCTCGTTGCCCTCGCTGTTTTTCTCTTCTTAAACCCGACCCTGTATTTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTATTAATCACCTTCTACTACTTACTCTTCTTAGTTTTGGGATTCATGCTTGAGTTTTACTGTGTTTTGATTCAGGATAAAAGTGAATGGGCCGTCAATCCTGTTCTCCACGATGTTACTGCTGTGGTGAGTTGCCATCGTTCCGATTTTTTATTTTGTTTGGTTTGAGAACAGATAATTTAATGGGTGCTTCTATGTTTTTTGATCGTGTAGTGATAAAATTGAACTCTATGTTGTGTTTGTTTAATTGGTTTGGTGTAGAGTAGTTCGTGAACGTTTGTTGATCGATGATTTAGGAATTTAATTCAATTCAATTCTTGCTATTAGCAACTGGAGTATTCTATCTAACTCAATTCATGGTTTTCAAGGGACGTAAAAAATTGTAGGAATGGAGTTCGGGGTTTTCTTTTGGAAAAATCTTTATTTGTATTAGGTACTATTTGATAACCTTTTGGTTTTTGGTTTGTGGTTTTTGATTTTTAATTTTTGAAAGTTAAGCTTATTTGGTTGTTATCTACTTCTTAGAAGTGTTTTTAAAACCATGCCAAGTTTTGAAAACTAAAAAAAAGAGTAGTTTTTAAAACTTGTTTTAGTTGTTTGTAGGCTTAGAATTTAAATGTTTAAATTCGAAAAATGAAAACTATGGAAAGGAAGTTGCAAGAAAACCAGGTTAATTTTCAAAACCCAAAACCCAAAAATCCAATAGTTATCAAAACGGGGCTTGGTTTCAAACTCCACAGTAGTTTCATGGTTTTTTTGCTTTTACTTTTGAGTTTATCCGAATGAGGAGTTCCTTGAGATTGCAAATAATGTATGATTCTGGGGAATTCTTCTTCTTCGGTTTATTCCTTGAGCTGAGGTTCTCCTTTTTACAATTTGTTACCTTTGCAAAATTTAAAGTTTGGATGTTTTTGTCATAATTATTTTGGTTTCCATGCCTCTTAATTATTATTGTACTGCCTTGAAACAGGCAGGATCCGGTCTTGGTGGGTTGCTGAGTGCAGTTCATGCCTATAATACAGGTAATCCTATTAGACTCTCAATAATATTTCTTTTAGTTTACACAATTACTCATAATTTTCTCTGATTACAGGGATCCCACACCTCCAGAGTTATGTGAAGGGACCAAAGTGGCTTCCTTTTGTAATTGGGGTAATGCCTTTAATTGTGATCTTTCTTTGTTTTGTGCTGATATTAAACTATGCAATCCATTTAGTATTGTTGCAAATGTCATTGGAGTTTCTTACTTGATTCTTCTGAGTTTTGTTCCATTTACCATTTATGTGACTTCCACATTTATCTCTTTGTTGACAGGTGCCCGCCCTATTATTGTGCTCGAGTGCTGGAGCTACATTTGGAGGTATGCTAGGAAATAGTTTTTGCTTGTTCTCTCTTTTAAGAAAAGGTTGATGTTATGTTGGCGTGTGGTTTTTTGTATTTAAATTATAACATAATATGGACTACTGTATTGAAATACATATACAGATGAAGGGAAGGACTAGAACTAAAACCTGTATACAAACATGGAAAGATTACTGAAATTTTTTGTCCAGTTAGCGATTAGCAAATTAATAGGAAAGATCAATAAATACTTGGATTAAAGTGGGAAAGAGCTACATTCCTCCACTTTTATCCTGGCTCACATATCTTCTAGAAAAGTCTTGTTATCTATCTCTATTACCGAATGCTAGTGTCTAAGTTGTTATAGCAGTGAACTTCTTTCATTTTTTAAAAAAGAAAGTAAAATAGCGACATGCATCTCCACCTGAAAGCTAGAAGAGAATCTTGGAATTCCATCACTCTATTATATTATGGGACCTTGACTTCATAATGCTTTTCTGGAAAATTAGATTTAGGAAAGGGTTTCCTTCTCTTCTCCTTGCATCACAGCTTGCTGATTGACTTTCTGCTCAAAGGTGTCAAGTGTCCTTTATTTAGCTCCCTCTTCATGGAGTTGTACAATGAAACTTGGCACCATAGTTTCTCAAGAAAAAAATCTCTTCCTTTTGGAGCTCAGTACGAGAGTGTGAATACCCATGGTATCATGCAGAAAGGAACTCTTGCTTGGCCTTTTTTCCTTGTCGTGATGTGTACCTTAGATGGAAAACTGGAAGAGTTAAGCTGCACTTTTCTCTGCTGCCATTCTCCAACAGATTTTATGATACTCTCCTATACTGGCCGTCGGCCCCTCTACAGAGCCTTAAAGTTTCTTGGATTTATTTAGGTTTGGCCTTCTTTCACCTAGTAGGTGGGTTCACTGTAAAAGCTTTTGAGGTCATTTTTGGCTTGCATTCTGTCGGAAGTGAGAATATTTTTGTTTAGTTGGTTCTGTGGAGTTCTTGCATCCCTTGAGCTGTGGCAGAAGGAGGCCAGGATCCTTTTCTTAGTTGAGGGCTGAGAAGCATGCTCAAAATGTGGATAAAACATGAAATGTTTGTGTACATGATGGTCAGTTTCCGTAAAAGTAGGAACCAGACAAATTGGGGATACATGTTTCTATAAGGATTTGTATGTATTATTTACTTTGTTTAGAAACTAGGATTTCGTTGTGAAAATGAATGAATATACAAGGTCCTAAGGAAAAGAAAAAACAACAAAAGGAGCCTCAAAGAGGTTTGAAGAACTACAAAAAATGATTAAAATCTATAAGGATAAAGCCTAGCTGGTAATTTCAAAAGACCTTACCACCGAGGTCCAACCAATATGAAACCCGATCTCTCTCTTTTAACTTGAACGCCGACCTCTACTCCTAAAATTTCTATGACTCTACTCTAGTCAAACCCTCAAATAACTTTAAAAGAAAAAGCCCTTCTAGTTCTCCCTAAAAGGGATAAACACAAAATCTCCTATATAATTTTTTTATTTTTCTGAAATGTTAAAGCCATGAAGATAAGCTGTCCAAGGATAAAAACAAAATCTTCTATCAACAGCGTTCCAACTCTACTAATGCTCATCCCAAAGATAAAAAACCAGTCCTTATCTCAGACTCCACCAAGTTATAGAGATATGGAAATTTAATTGTAAATGGTTCAGAGTCCAACTAAGCCTCTTATGTTCTCATGTGTAATATTTTCACAATATCAGCTTGGAATATTTAAGATAAAGTTTCTATTTCCTTGTGAAAATAAGTGGCGAATCCAAACAAGCATCCTCGCAAAATTTTATCATCTTTCCATTGCTAAGCTTTAACCATGAATAATAAGATTACACCAAGCCCTTTTAACTTTGTAATATTCCAAGGGCTCTTGGAGCTTCCCTCTTTTTTGTCAGTGATAAACCTCTCATTTTCCTCCAATGTATGCTAGAAAGCATTTTCCTAGAACTTCTCTTTTGTAAAAGATGCATTTTACTTTCAACTTCAATTGAACGCCTCCCTACATGTGGAAGTTATGGACTGTCGTATTGCTTTCCGTTGGGATACATATTCTAAATTATTTCACAATGAATGCATATAAAATTGTTGTTGTTATTGTTATATTATATTTCCCTCAATTGCGTATTGGACTTCCGTTGGTTTTGGTTTTTTAGCTTATGTGCTATCGGGTTTTGGTTTCATTTAAGGTTTTATGTGTTTCCTTTGGTGTCTTGTCCACTTTGTACCTCGATAGTTTTTCATCTCCTTCTATTTTTTCACAACTTATCTATCCCCTTGAATGTTATTGTATCTTTGAGGATCAGTCTCTTTTCATTTTATCAATGAAAAATTATGTTTCATTTTCTCCAAAAAAAAGAGAAAAAAAAAAGGCCGTCCTTGTATATAATTTTCAATCTTTATGTATGGTTGTCAATGCTGCATAAACACCTTTTAGGAAGTGGGAATCTAGACATTCTTGCTAGTTGCTTAGGCAGTGTGTATGATTTGGCACTGTGCTCGGTTAGAGTATGATGGTTGAAGATATGGCATAATTGATCCTCTATTTTATAACAATTTCTTTTTAGTTTTCTATTTTCAAAAATTAGCATGCTTTCTCAACTGTTCCTTTAGTATCTCTTTCAGATCTCTTGATATCACACATTTGATTTTATTAGAAAAAATTCGGAAATAAAACAAATTTTTAATAACGGTTTTCTTTTAATTTTTAAAATTTGGCATAGAGTTAAAAACTATTTCGAACAAGTAGATAACAAAAGAAAGCAACACATTGGTTATAAACCTAATATTAAAAAGCAGATACAAAAATGGTAAAAAAAGGGGCTTAATTTTAGATATTCATTATTCAAAATTAATTTGCATATCAGCATCTACTAACCATAGGTCTTAGTGTTGCTGAAGGTGAATATAATTGTCCGTTGACATACAATCTGCAGGTTTTGTTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCAAGTGCTTCCCATTATGGAGTTTCACTTCTCACTCGAAGAATTGAAGACAATCACACATCCCAAACTCAGCAAGCAAGCACTCAGTGATTTCACAGGTGGCATAATTTCAAGCAAGGAATCTTCTTTTTTATTTTCCTATTCTTTTTTTCCTGATGGAAATTTTGCAAAGTCATCTTTGGCTGTAGATTTAGTCATTTAGAACGTCTAATTTGTTTTTGCTTTTGTGAAGACACCTACCAATGTATGTAAATTGCAGAGAGTCTCTGTTTTGCAGTATAATATCCAAGTAATAACGTTATTAGGGTTGTGCGACTTTCAACTAACAAGGAATATTGTTGAGAATTTTGTATAACTTTGCTGATAACAACGAAAACTTTACAGCAGTAATGTGATATTTGTTGTGTAGTAGTTCATTGAAGGCAATC GTTCTTCCGTCATCGTTGGCTTTTAACTCAACCTCCCGTTTCTCGTCAGAACTGTAAACTGAAGACGGAACCCGCGAATTCGTTGCCGATCAAAGATCTTCGGAGCGAGCTTGAGTCCAGACATGGGTACTAGAGAAGTTTACGAACAGAGGCTAAGAAGTGGCAATCTGTACCATGAACCCACTATGAATCCTGGGCTCGGATCGCCTCGTTGCCCTCGCTGTTTTTCTCTTCTTAAACCCGACCCTGATAAAAGTGAATGGGCCGTCAATCCTGTTCTCCACGATGTTACTGCTGTGGCAGGATCCGGTCTTGGTGGGTTGCTGAGTGCAGTTCATGCCTATAATACAGGGATCCCACACCTCCAGAGTTATGTGAAGGGACCAAAGTGGCTTCCTTTTGTAATTGGGGTGCCCGCCCTATTATTGTGCTCGAGTGCTGGAGCTACATTTGGAGGTTTTGTTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCAAGTGCTTCCCATTATGGAGTTTCACTTCTCACTCGAAGAATTGAAGACAATCACACATCCCAAACTCAGCAAGCAAGCACTCAGTGATTTCACAGGTGGCATAATTTCAAGCAAGGAATCTTCTTTTTTATTTTCCTATTCTTTTTTTCCTGATGGAAATTTTGCAAAGTCATCTTTGGCTGTAGATTTAGTCATTTAGAACGTCTAATTTGTTTTTGCTTTTGTGAAGACACCTACCAATGTATGTAAATTGCAGAGAGTCTCTGTTTTGCAGTATAATATCCAAGTAATAACGTTATTAGGGTTGTGCGACTTTCAACTAACAAGGAATATTGTTGAGAATTTTGTATAACTTTGCTGATAACAACGAAAACTTTACAGCAGTAATGTGATATTTGTTGTGTAGTAGTTCATTGAAGGCAATC ATGGGTACTAGAGAAGTTTACGAACAGAGGCTAAGAAGTGGCAATCTGTACCATGAACCCACTATGAATCCTGGGCTCGGATCGCCTCGTTGCCCTCGCTGTTTTTCTCTTCTTAAACCCGACCCTGATAAAAGTGAATGGGCCGTCAATCCTGTTCTCCACGATGTTACTGCTGTGGCAGGATCCGGTCTTGGTGGGTTGCTGAGTGCAGTTCATGCCTATAATACAGGGATCCCACACCTCCAGAGTTATGTGAAGGGACCAAAGTGGCTTCCTTTTGTAATTGGGGTGCCCGCCCTATTATTGTGCTCGAGTGCTGGAGCTACATTTGGAGGTTTTGTTCTTCCAAGATTTACTCAACTCACTGTAACATCCTACTATGCCACCTCAAGTGCTTCCCATTATGGAGTTTCACTTCTCACTCGAAGAATTGAAGACAATCACACATCCCAAACTCAGCAAGCAAGCACTCAGTGA MGTREVYEQRLRSGNLYHEPTMNPGLGSPRCPRCFSLLKPDPDKSEWAVNPVLHDVTAVAGSGLGGLLSAVHAYNTGIPHLQSYVKGPKWLPFVIGVPALLLCSSAGATFGGFVLPRFTQLTVTSYYATSSASHYGVSLLTRRIEDNHTSQTQQASTQ Homology
BLAST of Cmc04g0115031.1 vs. NCBI nr
Match: XP_008443017.1 (PREDICTED: uncharacterized protein LOC103486742 [Cucumis melo]) HSP 1 Score: 322.4 bits (825), Expect = 2.2e-84 Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. NCBI nr
Match: XP_011652076.1 (uncharacterized protein LOC101220824 [Cucumis sativus]) HSP 1 Score: 305.4 bits (781), Expect = 2.8e-79 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. NCBI nr
Match: XP_038904167.1 (uncharacterized protein LOC120090522 [Benincasa hispida] >XP_038904168.1 uncharacterized protein LOC120090522 [Benincasa hispida]) HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78 Identity = 144/158 (91.14%), Postives = 149/158 (94.30%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. NCBI nr
Match: XP_023538973.1 (uncharacterized protein LOC111799746 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.0 bits (759), Expect = 9.8e-77 Identity = 139/153 (90.85%), Postives = 146/153 (95.42%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. NCBI nr
Match: KAE8651129.1 (hypothetical protein Csa_002251 [Cucumis sativus]) HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75 Identity = 145/175 (82.86%), Postives = 149/175 (85.14%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. ExPASy TrEMBL
Match: A0A1S3B6K8 (uncharacterized protein LOC103486742 OS=Cucumis melo OX=3656 GN=LOC103486742 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84 Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. ExPASy TrEMBL
Match: A0A0A0LEC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G798610 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 1.3e-79 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. ExPASy TrEMBL
Match: A0A6J1FZY6 (uncharacterized protein LOC111449402 OS=Cucurbita moschata OX=3662 GN=LOC111449402 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.5e-75 Identity = 136/153 (88.89%), Postives = 145/153 (94.77%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. ExPASy TrEMBL
Match: A0A6J1L0N8 (uncharacterized protein LOC111498779 OS=Cucurbita maxima OX=3661 GN=LOC111498779 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75 Identity = 136/153 (88.89%), Postives = 145/153 (94.77%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. ExPASy TrEMBL
Match: A0A6J1DD33 (uncharacterized protein LOC111019374 OS=Momordica charantia OX=3673 GN=LOC111019374 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75 Identity = 136/158 (86.08%), Postives = 147/158 (93.04%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. TAIR 10
Match: AT2G41945.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 227.3 bits (578), Expect = 8.9e-60 Identity = 105/154 (68.18%), Postives = 128/154 (83.12%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. TAIR 10
Match: AT2G41945.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 226.9 bits (577), Expect = 1.2e-59 Identity = 105/158 (66.46%), Postives = 129/158 (81.65%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. TAIR 10
Match: AT2G41945.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 208.0 bits (528), Expect = 5.6e-54 Identity = 105/196 (53.57%), Postives = 129/196 (65.82%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. TAIR 10
Match: AT5G18250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04040.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 8.7e-15 Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 0
BLAST of Cmc04g0115031.1 vs. TAIR 10
Match: AT3G04040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18250.1); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14 Identity = 36/104 (34.62%), Postives = 59/104 (56.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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