Cmc04g0112261.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0112261.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Phytocyanin domain-containing protein
Location	CMiso1.1chr04: 31100149 .. 31102379 (+)
Sequence length	1366
RNA-Seq Expression	Cmc04g0112261.1
Synteny	Cmc04g0112261.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTACTAACCCAGAAGTTTAAGTTTGAATTAAAAAATTAATGGAAGTTGTAGATCCATAAAGCAACCTCTTTTCTCTTTTTTCAATCCTTTATAAGCCTCTCACTTCGCCCCTTCTAGAGAACATTGGAAATACAGAACAAATGGAAGTCCTAAGAACAAGGGTCGGTGGCAGTGGGCTTCTGGTGGCGGTTGCGGCGGCAGTGGTGGTACTGCTGGCGTCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACTAATGTGAACTATAGTACCTGGGCTCAGGGAAAGCACTTCTACTATGATGATTGGCTCTGTAAGCACTTCTATCTTTAGATCTGCGAATGGTGTTTAAAGTTACTGCTGATTTTCAGATCTTATGTGGATTTTTAGCTTCTTTAGTTTGTTTTCGGACAGGTTTTGATTTTGGGGTTTTGTTGGATTTGCTGGGGTTTTAAACCTTTAGCTTGAAGTTTTTTTGTTCTGTTTGGTTGCTGAGAAAATTGGGGGAAAATTAGTTTCTATTTTAGTAGTTTTTGAATGGGTTCTTTCCCTATTCAAGATAACTTCAAAGAGATTGACTGTTTGTGCTGAGAAATGAGCGATTTCTCTGTTTACTTTGGATGAATGTGGATGAGTTAGGAACTTGGGATTGTTCGTGTTCTTGTTATTCTGTTTGATTCGTATATCTCTTGCTCATGCATTGACATCTAAATACAATGTAGTGATATTTTCTTATAAATCAAGGCGGGTACTTTCATCATGTTTTGTTAGAAATTTCTATGAGATCTTTTAATTTAGTCCAAATATGCCTAAGTATAAAGTTACTAGCAAATGAGTTTACTAACAAAAGCAGGAATATGGCTCTGGCTTGTCTGTAACCTGAAAAACACAGTGTTCTCCAAATTAACAAAAAGTTCTTTCTGTTTTTCGTCGATGGGGAATGTTTATTTGCTTCCATAGTTACTAGAAAATGAGTTCACTTAACAAAAGTGGGAAGATGTCTCTAGATTGTCTGTCACCACACACAATGTTCTCGGAACCAACGAGAAATTCTTTTGATTTTTCGTTGATGGAGAATGTTTATCCGTTTTTCGAAACCTTACATAGAGATTAGTCGAACTAGTTCAAACAATTCGAGGGTGATTTTGGGTCACTTCCTTACCCTTGTTGTGTACTAGTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGAATTGCATTTCTGATCATCCACTCCACAATTTCACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCCGGCCTTATTACTTCATAAGTGGCAAAGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTTGCCCATGAACGAAAAGAGCAGTGCTCTTAGATCTACCTACACTGGCCACACCCCATTCGTTTTAACCGCTGTTTTTGCCATTGCTGCTGTATTTGAAGCTTTCTCCCGGGTTTGGTAGAGATCAGTTCTTATTTGATTCATATTCAATAGAGTACATTTTTCTTCACCAAATTGTGGAAGGAAAGGAAGATCAAGTTGTTAATTCTCTTCTTTCATATTTTTTTTTTGAGGGTGTAGTGTCTTTTTGTGTTATCTTTTGCTTTCACTTTGATTTAGACTTCAATATTCAAAATAGTTTTTTTCTTTTTTTTCCATTTTTCAAATTTTAAAAGTTTGTCATTTTTGTTGTTTGGGTGGTGGATATAAAAATCGTAGGGATTGAATTTTTGATAAGACTCTAATTTATTTGTCGTGTCGTCTTAAATGGGTTTTGCAAGCAACCAACCATGTGAATGTAGATTCTTGTGTCTCTTTTATTCATTAAATAAATTTGGAAGCCATTGGGACACCAAAGATCTCACCTGTAATGTTGTTTGGACCCTTTTATCCAGCACACTAACTAAACCAGCCTTTTTCGGATTCAAATTTTAGTTCAACTACAACCTATATGTTTTAGGGACTAAGAGGTCTATCAAATTATGTACCTGTTTTAATCGATTGAGGAAAAAACGAGAAAGATCAAGTGAATATTGTAAATTGGTTTCATTAGGTATAAAACCAATCGAATTTAATTCTGCTATACTTGAGTATATTTGATAATTATTTTGCTTTTCTTATCAATTTTAAGTACAAAAGTTG

mRNA sequence

TTTGTACTAACCCAGAAGTTTAAGTTTGAATTAAAAAATTAATGGAAGTTGTAGATCCATAAAGCAACCTCTTTTCTCTTTTTTCAATCCTTTATAAGCCTCTCACTTCGCCCCTTCTAGAGAACATTGGAAATACAGAACAAATGGAAGTCCTAAGAACAAGGGTCGGTGGCAGTGGGCTTCTGGTGGCGGTTGCGGCGGCAGTGGTGGTACTGCTGGCGTCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACTAATGTGAACTATAGTACCTGGGCTCAGGGAAAGCACTTCTACTATGATGATTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGAATTGCATTTCTGATCATCCACTCCACAATTTCACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCCGGCCTTATTACTTCATAAGTGGCAAAGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTTGCCCATGAACGAAAAGAGCAGTGCTCTTAGATCTACCTACACTGGCCACACCCCATTCGTTTTAACCGCTGTTTTTGCCATTGCTGCTGTATTTGAAGCTTTCTCCCGGGTTTGGTAGAGATCAGTTCTTATTTGATTCATATTCAATAGAGTACATTTTTCTTCACCAAATTGTGGAAGGAAAGGAAGATCAAGTTGTTAATTCTCTTCTTTCATATTTTTTTTTTGAGGGTGTAGTGTCTTTTTGTGTTATCTTTTGCTTTCACTTTGATTTAGACTTCAATATTCAAAATAGTTTTTTTCTTTTTTTTCCATTTTTCAAATTTTAAAAGTTTGTCATTTTTGTTGTTTGGGTGGTGGATATAAAAATCGTAGGGATTGAATTTTTGATAAGACTCTAATTTATTTGTCGTGTCGTCTTAAATGGGTTTTGCAAGCAACCAACCATGTGAATGTAGATTCTTGTGTCTCTTTTATTCATTAAATAAATTTGGAAGCCATTGGGACACCAAAGATCTCACCTGTAATGTTGTTTGGACCCTTTTATCCAGCACACTAACTAAACCAGCCTTTTTCGGATTCAAATTTTAGTTCAACTACAACCTATATGTTTTAGGGACTAAGAGGTCTATCAAATTATGTACCTGTTTTAATCGATTGAGGAAAAAACGAGAAAGATCAAGTGAATATTGTAAATTGGTTTCATTAGGTATAAAACCAATCGAATTTAATTCTGCTATACTTGAGTATATTTGATAATTATTTTGCTTTTCTTATCAATTTTAAGTACAAAAGTTG

Coding sequence (CDS)

ATGGAAGTCCTAAGAACAAGGGTCGGTGGCAGTGGGCTTCTGGTGGCGGTTGCGGCGGCAGTGGTGGTACTGCTGGCGTCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACTAATGTGAACTATAGTACCTGGGCTCAGGGAAAGCACTTCTACTATGATGATTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGATTATGAGAATTGCATTTCTGATCATCCACTCCACAATTTCACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCCGGCCTTATTACTTCATAAGTGGCAAAGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTTGCCCATGAACGAAAAGAGCAGTGCTCTTAGATCTACCTACACTGGCCACACCCCATTCGTTTTAACCGCTGTTTTTGCCATTGCTGCTGTATTTGAAGCTTTCTCCCGGGTTTGGTAG

Protein sequence

MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW

Homology

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BLAST of Cmc04g0112261.1 vs. NCBI nr
Match: XP_008443359.1 (PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [Cucumis melo var. makuwa] >TYK25602.1 lamin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 371.3 bits (952), Expect = 4.7e-99
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Cmc04g0112261.1 vs. NCBI nr
Match: XP_004136682.1 (lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 2.1e-91
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           MEVLRTRVGGSGLLVAV AAVV+LLA+VPEVSATRWTVGGNMGW TNVNY+TWAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAV-AAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FC+GGMKLAIHVEHLPPPPS+ P+NEKSSALRST TGHTPFVLTAVFAIAAV E F+RVW
Sbjct: 121 FCFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]

BLAST of Cmc04g0112261.1 vs. NCBI nr
Match: XP_038903389.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 329.7 bits (844), Expect = 1.6e-86
Identity = 160/180 (88.89%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           MEVLR RV G GLLVAV  AVVVLLA+VPEVSATRWTVGGNMGWTTNVNY+ WAQ KHFY
Sbjct: 1   MEVLR-RVDGGGLLVAV--AVVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQDKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHVEHLPPPPS+ P+NEKSSALRSTY  HTPF+LTAVFAI A++EAF+R+W
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTYISHTPFILTAVFAITALYEAFARLW 177

[Close]

BLAST of Cmc04g0112261.1 vs. NCBI nr
Match: XP_022935116.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 4.0e-82
Identity = 152/180 (84.44%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           M+VL TRVGG GLLV   AA VV+L ++PEVSATRWTVGG MGWTTNVNY+ WA+GKHFY
Sbjct: 31  MQVLTTRVGGVGLLV---AAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 90

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YENC SD PLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 91  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 150

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHV HLPPPPSA P N KSSALRS+Y GHTPFVLTAVFAIAA+ EAF R W
Sbjct: 151 FCYGGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRFW 207

[Close]

BLAST of Cmc04g0112261.1 vs. NCBI nr
Match: XP_023528207.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.2 bits (796), Expect = 5.7e-81
Identity = 152/180 (84.44%), Postives = 160/180 (88.89%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           M+VLRTRVGG  LLVA AAA V+L A +PEVSATRWTVGG MGWTTNVNY+ WA+GKHFY
Sbjct: 1   MQVLRTRVGGVWLLVAAAAAAVMLTA-MPEVSATRWTVGGKMGWTTNVNYTMWAEGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YENC SD PLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHV HLPPPPSA P N  SSALRS+Y  HTPFVLTAVFAIAA+ EAF R W
Sbjct: 121 FCYGGMKLAIHVRHLPPPPSASPFNATSSALRSSYIAHTPFVLTAVFAIAALREAFCRFW 179

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-46
Identity = 87/169 (51.48%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 13  LLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRN 72
           +L+       ++ A +P V+A ++TVG N  W  N+NY+ WAQGKHFY  DWL+FV+DRN
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65

Query: 73  QMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHV 132
           Q N+LEVNKTDYE CI+DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V
Sbjct: 66  QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125

Query: 133 EHLPPPPSALPMNEKSSALRSTYTGHTPFVL-TAVFAIAAVFEAFSRVW 181
           E LPPPP + P+    S   S  TG   F++  ++FA  A+++  SR+W
Sbjct: 126 EKLPPPPKSAPVKNIGSV--SMVTGLAQFMIPVSLFAFPAMWDVISRMW 172

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.4e-13
Identity = 54/147 (36.73%), Postives = 75/147 (51.02%), Query Frame = 0


Query: 17  VAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRNQMNV 76
           VAAA+++ LA+VP V A  + VG   GWT+N++Y+ W  GK F   D L FVY  +  +V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH-SV 64

Query: 77  LEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIHVEHL 136
             V+K  Y+NC S     NF  G  +  + L      +F+    G C  GMKLA+ V   
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTK--IDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAA 124

Query: 137 PPPPS--ALPMNEKSSALRSTYTGHTP 161
            P PS  + P +  S+      T  TP
Sbjct: 125 APSPSTPSSPPSTPSTPSSPPSTPSTP 148

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy Swiss-Prot
Match: A0A0M4FTF3 (Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 47/136 (34.56%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 34  TRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCISDHPL 93
           T + VG + GWT +V+Y  WA+GK F   D L F Y +   NV +VN+T ++NCI+  P 
Sbjct: 116 TEYWVGDDKGWTIDVDYQAWAKGKTFKVGDTLVFKYTKGHHNVFKVNQTGFQNCIAPPPS 175

Query: 94  HNFTTGAGRDVVHLNVTRPYYFISG--KGFCYGGMKLAIHVEHLP---PP---PSALPMN 153
              T  +G DV+ L      ++I G          KLAI VE  P   PP   P+  P  
Sbjct: 176 EGLT--SGHDVITLAAPGKKWYICGFPTHCSEHKQKLAITVEGAPAQTPPVWAPAPAPGT 235

Query: 154 EKSSALRSTYTGHTPF 162
            K     ++Y   +P+
Sbjct: 236 PKKIDTGNSYKITSPY 249

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 48/133 (36.09%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 33  ATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCISDHP 92
           AT +TVG   GW    +YSTWA  K F   D L F Y      V EV ++DY++C S + 
Sbjct: 24  ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNS 83

Query: 93  LHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHVEHLPPPPSALPMNEKSSAL 152
           +   +TGA    + L     +YFI G  G   GGMKL+I V+      +A      SS  
Sbjct: 84  ISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAAPSATPSSSGK 143

Query: 153 RSTYTGHTPFVLT 165
            S  +  TP   T
Sbjct: 144 GSPSSDDTPAATT 154

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 44/138 (31.88%), Postives = 68/138 (49.28%), Query Frame = 0


Query: 32  SATRWTVGGNMGWTTN--VNYSTWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCIS 91
           +A ++ VGG+  W TN   NY +W+    F   D L+F Y +   +VLEVNK DY+ C +
Sbjct: 27  NARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNT 86

Query: 92  DHPLHNFTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHV--EHLP----PPPSAL 151
            +P+     G     + L+   P+YFISG +  C  G KL + V    +P     P +A 
Sbjct: 87  KNPIKRVDDGDSE--ISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAA 146

Query: 152 PMNEKSSALRSTYTGHTP 161
           P +    ++      H+P
Sbjct: 147 PGSSTPGSMTPPGGAHSP 162

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy TrEMBL
Match: A0A5D3DPZ3 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007610 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy TrEMBL
Match: A0A1S3B7D2 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy TrEMBL
Match: A0A0A0LC11 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.0e-91
Identity = 167/180 (92.78%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           MEVLRTRVGGSGLLVAV AAVV+LLA+VPEVSATRWTVGGNMGW TNVNY+TWAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAV-AAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FC+GGMKLAIHVEHLPPPPS+ P+NEKSSALRST TGHTPFVLTAVFAIAAV E F+RVW
Sbjct: 121 FCFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAIAAVLEVFTRVW 179

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy TrEMBL
Match: A0A6J1F3N0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 152/180 (84.44%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           M+VL TRVGG GLLV   AA VV+L ++PEVSATRWTVGG MGWTTNVNY+ WA+GKHFY
Sbjct: 31  MQVLTTRVGGVGLLV---AAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 90

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YENC SD PLHNFTTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 91  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKG 150

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHV HLPPPPSA P N KSSALRS+Y GHTPFVLTAVFAIAA+ EAF R W
Sbjct: 151 FCYGGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAIAALREAFRRFW 207

[Close]

BLAST of Cmc04g0112261.1 vs. ExPASy TrEMBL
Match: A0A6J1J8R9 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60
           M+VLRTRVGG GLLV   AA VV+L ++ EVSATRWTVGG MGWTTNVNY+ WA+GKHFY
Sbjct: 1   MQVLRTRVGGVGLLV---AAAVVVLTAMSEVSATRWTVGGKMGWTTNVNYTIWAEGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKT+YENC SD PLHNFTTGAGRDVVHLNVT PYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTGPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAVFEAFSRVW 180
           FCYGGMKLAIHV HLPPPPSA P N KSSALRS+Y  HTPFVLTAVFAIAA+ EAF R W
Sbjct: 121 FCYGGMKLAIHVWHLPPPPSASPFNAKSSALRSSYIAHTPFVLTAVFAIAALREAFRRFW 177

[Close]

BLAST of Cmc04g0112261.1 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47
Identity = 87/169 (51.48%), Postives = 118/169 (69.82%), Query Frame = 0


Query: 13  LLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRN 72
           +L+       ++ A +P V+A ++TVG N  W  N+NY+ WAQGKHFY  DWL+FV+DRN
Sbjct: 6   VLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRN 65

Query: 73  QMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHV 132
           Q N+LEVNKTDYE CI+DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL++ V
Sbjct: 66  QHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125

Query: 133 EHLPPPPSALPMNEKSSALRSTYTGHTPFVL-TAVFAIAAVFEAFSRVW 181
           E LPPPP + P+    S   S  TG   F++  ++FA  A+++  SR+W
Sbjct: 126 EKLPPPPKSAPVKNIGSV--SMVTGLAQFMIPVSLFAFPAMWDVISRMW 172

[Close]

BLAST of Cmc04g0112261.1 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 169.9 bits (429), Expect = 1.9e-42
Identity = 87/159 (54.72%), Postives = 110/159 (69.18%), Query Frame = 0


Query: 15  VAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVYDRNQM 74
           V VA AV+  L +   V+A RWTVG N  W  N+NY+ WAQ KHFY DDWL+FVY+RNQ 
Sbjct: 6   VLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQY 65

Query: 75  NVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIHVE 134
           NV+EVN+T+Y +C  ++P+ N++ GAGRD+VHLNVTR YY ISG  G CYGGMKLA+ VE
Sbjct: 66  NVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVE 125

Query: 135 HLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAIAAV 173
             PPPP+A P N+ S+    + +G     L  V   AAV
Sbjct: 126 KPPPPPAAAP-NKNSARRTFSVSGFAYQFLIPVAVFAAV 163

[Close]

BLAST of Cmc04g0112261.1 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-36
Identity = 69/136 (50.74%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 8   VGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFF 67
           +G S +L++      ++ A +PEV+A ++ VG    W  N+NY+ WAQGKHFY  DWL+F
Sbjct: 1   MGRSMVLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYF 60

Query: 68  VYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMK 127
           V+ R+Q N+LEVNK DYE CIS+ P+ N+T GAGRD+V L  TR YY + G+G C  GMK
Sbjct: 61  VFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMK 120

Query: 128 LAIHVEHLPPPPSALP 144
           L + VE  PPPP   P
Sbjct: 121 LDVLVETPPPPPPFTP 136

[Close]

BLAST of Cmc04g0112261.1 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 60/140 (42.86%), Postives = 83/140 (59.29%), Query Frame = 0


Query: 10  GSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFYYDDWLFFVY 69
           G  L   V   V++L+  V   S+     GG   W ++VN+S WA  + FY  DWL+F +
Sbjct: 3   GKYLWALVYVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGF 62

Query: 70  DRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLA 129
           +R + N+L+VNK+ YE C+ +  + N T G GRDV  L   +PYYFI G+G+C  GMKLA
Sbjct: 63  NRTRHNILQVNKSSYEQCVDNDYIFNITRG-GRDVFQLLEPKPYYFICGRGYCLKGMKLA 122

Query: 130 IHVEHLPPPPSALPMNEKSS 150
           I V  LP PP + P N  S+
Sbjct: 123 ITV--LPQPPPSAPTNFTST 139

[Close]

BLAST of Cmc04g0112261.1 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-21
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 59  FYYDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISG 118
           F+++  L FV+ R+Q N+LEVNK DYE CIS+ P+ N+T GAGRD+V L  TR YY + G
Sbjct: 14  FFFNFSLNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDG 73

Query: 119 KGFCYGGMKLAIHVEHLPPPPSALP 144
           +G C  GMKL + VE  PPPP   P
Sbjct: 74  RGGCVQGMKLDVLVETPPPPPPFTP 98

The following BLAST results are available for this feature:

BLAST of Cmc04g0112261.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443359.1	4.7e-99	100.00	PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [C...	[more]
XP_004136682.1	2.1e-91	92.78	lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319...	[more]
XP_038903389.1	1.6e-86	88.89	lamin-like protein [Benincasa hispida]	[more]
XP_022935116.1	4.0e-82	84.44	lamin-like protein [Cucurbita moschata]	[more]
XP_023528207.1	5.7e-81	84.44	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc04g0112261.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	2.1e-46	51.48	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q96316	2.4e-13	36.73	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
A0A0M4FTF3	1.3e-11	34.56	Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1	[more]
Q41001	1.7e-11	36.09	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9T076	3.2e-10	31.88	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]

BLAST of Cmc04g0112261.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPZ3	2.3e-99	100.00	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B7D2	2.3e-99	100.00	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1	[more]
A0A0A0LC11	1.0e-91	92.78	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220...	[more]
A0A6J1F3N0	1.9e-82	84.44	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1	[more]
A0A6J1J8R9	3.1e-80	83.33	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482361 PE=4 SV=1	[more]

BLAST of Cmc04g0112261.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15350.1	1.5e-47	51.48	early nodulin-like protein 17	[more]
AT3G01070.1	1.9e-42	54.72	early nodulin-like protein 16	[more]
AT4G12880.1	2.1e-36	50.74	early nodulin-like protein 19	[more]
AT2G27035.1	2.1e-25	42.86	early nodulin-like protein 20	[more]
AT4G12880.2	5.4e-21	54.12	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 44..126 e-value: 5.6E-21 score: 74.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 34..134 score: 34.866596
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 32..135 e-value: 1.3E-29 score: 104.5
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 33..132
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 14..172
None	No IPR available	PANTHER	PTHR33021:SF231	LAMIN-LIKE PROTEIN	coord: 14..172

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0112261	Cmc04g0112261	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0112261.1-exon	Cmc04g0112261.1-exon-CMiso1.1chr04:31100149..31100487	exon
Cmc04g0112261.1-exon	Cmc04g0112261.1-exon-CMiso1.1chr04:31101353..31102379	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0112261.1-five_prime_utr	Cmc04g0112261.1-five_prime_utr-CMiso1.1chr04:31100149..31100291	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0112261.1-cds	Cmc04g0112261.1-cds-CMiso1.1chr04:31100292..31100487	CDS
Cmc04g0112261.1-cds	Cmc04g0112261.1-cds-CMiso1.1chr04:31101353..31101699	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0112261.1-three_prime_utr	Cmc04g0112261.1-three_prime_utr-CMiso1.1chr04:31101700..31102379	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0112261.1	Cmc04g0112261.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0016020	membrane
molecular_function	GO:0009055	electron transfer activity