Cmc04g0107801.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0107801.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr04: 26401149 .. 26402279 (+)
Sequence length	1131
RNA-Seq Expression	Cmc04g0107801.1
Synteny	Cmc04g0107801.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTGGTTTGACTAATGCTCTTGCGGTATTCATGGACTTGATGAACATAGTGTTTAAGGATTTCTTAGACACGTTTGTTATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCATCAGGTTTTGGAGACTCTTCGAGCTAATAAGTTGTATGCCAAATTCTCCCAGTGTGAGTTCTGGCTGAAGAAGGTGACTTGTCTCAACCATGTGGTTTCTAGTGAGGGAGTTTTTGTGGATCCAGCAAAGATCGAAGCGGTTACCAGTTGGCCTCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAAGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACTCAGTTGACCAGGAAAGGGATTCCTTTTGTTTGGAGCCCAGCTTGTGAGAGTAGCTTCCAGGAGCTTAAGCATAAGCTTGTGTCTGCACCAGTCCTTACAGTGCCAGATGGATCTGGAAGTTTCGTGATCTACAGTGATGCCTCAAAAAAAGGACTGGGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTTGCTTATACCTCCCGTCAGTTGAAGTGTCATGAGCAGAACTACCCTACTGATGACCTAGAGTTGGTAGCAGAGGTTTTTGCACTGAAGATATGGAGACACTACCTGTACAGTGAGAAGATACAGATTTTCAATGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGACAGAGAAGATGGCTTGAGTTGGTGAAGGATTATGACTGCGAGATTTTGTACCATCCAGGTAAGGCAAATGTAGTAGCTGATGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTGCTCAGAGATTTTGATAGAGCCGAGATTGCAGTCTCTATAAGGGAAGTTACCTCACAGTTGGCTCAGTTGTCAATGCAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCTATTAGTAGAGGCAGAGCAAGGTGAGGCTTTCTCCATATCCTCTGATGATGGACTTACATTTGATGGATGTTTGTGA

mRNA sequence

ATGTCTTTTGGTTTGACTAATGCTCTTGCGGTATTCATGGACTTGATGAACATAGTGTTTAAGGATTTCTTAGACACGTTTGTTATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCATCAGGTTTTGGAGACTCTTCGAGCTAATAAGTTGTATGCCAAATTCTCCCAGTGTGAGTTCTGGCTGAAGAAGGTGACTTGTCTCAACCATGTGGTTTCTAGTGAGGGAGTTTTTGTGGATCCAGCAAAGATCGAAGCGGTTACCAGTTGGCCTCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAAGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACTCAGTTGACCAGGAAAGGGATTCCTTTTGTTTGGAGCCCAGCTTGTGAGAGTAGCTTCCAGGAGCTTAAGCATAAGCTTGTGTCTGCACCAGTCCTTACAGTGCCAGATGGATCTGGAAGTTTCGTGATCTACAGTGATGCCTCAAAAAAAGGACTGGGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTTGCTTATACCTCCCGTCAGTTGAAGTGTCATGAGCAGAACTACCCTACTGATGACCTAGAGTTGGTAGCAGAGGTTTTTGCACTGAAGATATGGAGACACTACCTGTACAGTGAGAAGATACAGATTTTCAATGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGACAGAGAAGATGGCTTGAGTTGGTGAAGGATTATGACTGCGAGATTTTGTACCATCCAGGTAAGGCAAATGTAGTAGCTGATGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTGCTCAGAGATTTTGATAGAGCCGAGATTGCAGTCTCTATAAGGGAAGTTACCTCACAGTTGGCTCAGTTGTCAATGCAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCTATTAGTAGAGGCAGAGCAAGGTGAGGCTTTCTCCATATCCTCTGATGATGGACTTACATTTGATGGATGTTTGTGA

Coding sequence (CDS)

ATGTCTTTTGGTTTGACTAATGCTCTTGCGGTATTCATGGACTTGATGAACATAGTGTTTAAGGATTTCTTAGACACGTTTGTTATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGAGCATTTGCATCAGGTTTTGGAGACTCTTCGAGCTAATAAGTTGTATGCCAAATTCTCCCAGTGTGAGTTCTGGCTGAAGAAGGTGACTTGTCTCAACCATGTGGTTTCTAGTGAGGGAGTTTTTGTGGATCCAGCAAAGATCGAAGCGGTTACCAGTTGGCCTCGACCGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAAGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGACTCAGTTGACCAGGAAAGGGATTCCTTTTGTTTGGAGCCCAGCTTGTGAGAGTAGCTTCCAGGAGCTTAAGCATAAGCTTGTGTCTGCACCAGTCCTTACAGTGCCAGATGGATCTGGAAGTTTCGTGATCTACAGTGATGCCTCAAAAAAAGGACTGGGTTGTGTTTTGATGCAGCAAGGTAAGGTAGTTGCTTATACCTCCCGTCAGTTGAAGTGTCATGAGCAGAACTACCCTACTGATGACCTAGAGTTGGTAGCAGAGGTTTTTGCACTGAAGATATGGAGACACTACCTGTACAGTGAGAAGATACAGATTTTCAATGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGAGTTGAACATGAGACAGAGAAGATGGCTTGAGTTGGTGAAGGATTATGACTGCGAGATTTTGTACCATCCAGGTAAGGCAAATGTAGTAGCTGATGCGCTGAGTAGGAAGGTTGCACATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTGCTCAGAGATTTTGATAGAGCCGAGATTGCAGTCTCTATAAGGGAAGTTACCTCACAGTTGGCTCAGTTGTCAATGCAGCCGACCTTGAGACAGAGGATTATTGTTGCTCAGCTAAATGATCCTTATTTGGTCGAGAAGCGTCTATTAGTAGAGGCAGAGCAAGGTGAGGCTTTCTCCATATCCTCTGATGATGGACTTACATTTGATGGATGTTTGTGA

Protein sequence

MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYKRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIFNDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGEAFSISSDDGLTFDGCL

Homology

[Close]

BLAST of Cmc04g0107801.1 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 336/376 (89.36%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK
Sbjct: 251 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 370

Query: 121 RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
           RFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 371 RFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 430

Query: 181 ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWRHYLY EKIQI+
Sbjct: 431 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 490

Query: 241 NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
            DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Sbjct: 491 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 550

Query: 301 QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
           Q PLLRDF+RAEIAVS+ EVT+QLAQL++QPTLRQ+II AQLNDPYL EKR +VE EQGE
Sbjct: 551 QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGE 610

Query: 361 AFSISSDDGLTFDGCL 377
            FSISSDDGL F+G L
Sbjct: 611 DFSISSDDGLMFEGRL 626

[Close]

BLAST of Cmc04g0107801.1 vs. NCBI nr
Match: KAA0066951.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 337/376 (89.63%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK
Sbjct: 521 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 580

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 581 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 640

Query: 121 RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
           RFVEDFSRIASPLTQLTRKG PFVWSPACESSFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 641 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 700

Query: 181 ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWRHYLY EKIQI+
Sbjct: 701 ASKKGLGCVLMQQGKVVAYASRQLKVHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 760

Query: 241 NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
            DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Sbjct: 761 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 820

Query: 301 QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
           Q PLLRDF+RAEIAVS+ EVT+QLAQLS+QPTLRQ+II AQLNDPYLVEKR +VE  QGE
Sbjct: 821 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 880

Query: 361 AFSISSDDGLTFDGCL 377
            FSIS DDGL F+G L
Sbjct: 881 DFSISFDDGLMFEGRL 896

[Close]

BLAST of Cmc04g0107801.1 vs. NCBI nr
Match: KAA0037369.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 665.2 bits (1715), Expect = 3.3e-187
Identity = 335/376 (89.10%), Postives = 353/376 (93.88%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           MSFGLT A AVFMDLMN +FKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK
Sbjct: 580 MSFGLTKAPAVFMDLMNRLFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 639

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 640 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 699

Query: 121 RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
           RFVEDFSRIA+PLTQLTRKGIPFVWSPACESSFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 700 RFVEDFSRIANPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 759

Query: 181 ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWRHYLY EKIQI+
Sbjct: 760 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 819

Query: 241 NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
            DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Sbjct: 820 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 879

Query: 301 QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
           Q PLL+DF+RAEIAVS+ EVT+QLAQLS+QPTLRQ+II AQLNDPYLVEKR +VE  QGE
Sbjct: 880 QTPLLKDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 939

Query: 361 AFSISSDDGLTFDGCL 377
            FSISSDDGL F+G L
Sbjct: 940 DFSISSDDGLMFEGRL 955

[Close]

BLAST of Cmc04g0107801.1 vs. NCBI nr
Match: KAA0040547.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 664.5 bits (1713), Expect = 5.6e-187
Identity = 336/376 (89.36%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
            MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN 
Sbjct: 720  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANN 779

Query: 61   LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
            LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEI+SFLGLAGYY+
Sbjct: 780  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYR 839

Query: 121  RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
            RFVEDFSRIASPLTQLTRKG PFVWSPACESSFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 840  RFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 899

Query: 181  ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
            ASKKGLGCVLMQQGKVVAY SRQLK +EQNYPT DLELVA VFALKIWRHYLY EKIQI+
Sbjct: 900  ASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLYGEKIQIY 959

Query: 241  NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
             DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA LITK
Sbjct: 960  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAVLITK 1019

Query: 301  QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
            Q PLLRDF+RAEIAVS+ EVTSQLAQLS+QPTLRQ+II AQLNDPYLVEKR +VE  QGE
Sbjct: 1020 QTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 1079

Query: 361  AFSISSDDGLTFDGCL 377
             FSISSDDGL F+G L
Sbjct: 1080 DFSISSDDGLMFEGRL 1095

[Close]

BLAST of Cmc04g0107801.1 vs. NCBI nr
Match: KAA0050760.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 664.1 bits (1712), Expect = 7.3e-187
Identity = 334/376 (88.83%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
            MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEA+HEEHLHQVLETLRANK
Sbjct: 693  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLHQVLETLRANK 752

Query: 61   LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
            LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 753  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 812

Query: 121  RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
            RFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 813  RFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 872

Query: 181  ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
            ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWRHYLY EKIQI+
Sbjct: 873  ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 932

Query: 241  NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
             DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Sbjct: 933  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 992

Query: 301  QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
            Q PLLRDF+RAEIAVS+ EVT+QLAQL++QPTLRQ+II AQL+DPYL EKR +VE EQGE
Sbjct: 993  QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLDDPYLAEKRRVVETEQGE 1052

Query: 361  AFSISSDDGLTFDGCL 377
             FSISSDDGL F+G L
Sbjct: 1053 GFSISSDDGLMFEGRL 1068

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.4e-55
Identity = 114/290 (39.31%), Postives = 176/290 (60.69%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           M FGL NA A F   MN + +  L+   +V++DDI+++S +  EH + L  V E L    
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           L  +  +CEF  ++ T L HV++ +G+  +P KIEA+  +P P+   EI++FLGL GYY+
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFVEDFSRIASPLTQLTRKGIPF-VWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYS 180
           +F+ +F+ IA P+T+  +K +     +P  +S+F++LK+ +   P+L VPD +  F + +
Sbjct: 454 KFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTT 513

Query: 181 DASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQI 240
           DAS   LG VL Q G  ++Y SR L  HE NY T + EL+A V+A K +RHYL     +I
Sbjct: 514 DASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEI 573

Query: 241 FNDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 290
            +DH+ L + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 574 SSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.9e-50
Identity = 108/290 (37.24%), Postives = 165/290 (56.90%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           M FGL NA A F   MN + +  L+   +V++DDI+I+S +  EH   +  V   L    
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           L  +  +CEF  K+   L H+V+ +G+  +P K++A+ S+P P+   EIR+FLGL GYY+
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFVEDFSRIASPLTQLTRKGIPF-VWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYS 180
           +F+ +++ IA P+T   +K             +F++LK  ++  P+L +PD    FV+ +
Sbjct: 453 KFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTT 512

Query: 181 DASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQI 240
           DAS   LG VL Q G  +++ SR L  HE NY   + EL+A V+A K +RHYL   +  I
Sbjct: 513 DASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLI 572

Query: 241 FNDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSR 290
            +DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 573 ASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.7e-50
Identity = 108/303 (35.64%), Postives = 176/303 (58.09%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           + FGL NA ++F   ++ V ++ +     V++DD++I+S+ E++H  H+  VL+ L    
Sbjct: 309 LPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDAN 368

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           +     +  F+ + V  L  +VS +G   DP K++A+  +P P  V ++RSFLGLA YY+
Sbjct: 369 MRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYR 428

Query: 121 RFVEDFSRIASPLTQLTR-----------KGIPFVWSPACESSFQELKHKLVSAPV-LTV 180
            F++DF+ IA P+T + +           K IP  ++    ++FQ L++ L S  V L  
Sbjct: 429 VFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKY 488

Query: 181 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIW 240
           PD    F + +DAS  G+G VL Q+G+ +   SR LK  EQNY T++ EL+A V+AL   
Sbjct: 489 PDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKL 548

Query: 241 RHYLY-SEKIQIFNDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADAL 291
           +++LY S +I IF DH+ L +    +  N + +RW   +  ++ ++ Y PGK N VADAL
Sbjct: 549 QNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADAL 608

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.6e-49
Identity = 102/305 (33.44%), Postives = 177/305 (58.03%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           + FGL NA A+F  +++ + ++ +     V+IDDI+++S+    H ++L  VL +L    
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           L     +  F   +V  L ++V+++G+  DP K+ A++  P P++V E++ FLG+  YY+
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYR 369

Query: 121 RFVEDFSRIASPLTQLTR-----------KGIPFVWSPACESSFQELKHKLVSAPVLTVP 180
           +F++D++++A PLT LTR             +P         SF +LK  L S+ +L  P
Sbjct: 370 KFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFP 429

Query: 181 DGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYTSRQLKCHEQNYPTDDLELVAEVFAL 240
             +  F + +DAS   +G VL Q    + + +AY SR L   E+NY T + E++A +++L
Sbjct: 430 CFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSL 489

Query: 241 KIWRHYLY-SEKIQIFNDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVA 290
              R YLY +  I+++ DH+ L +    +  N + +RW   +++Y+CE++Y PGK+NVVA
Sbjct: 490 DNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVA 549

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.2e-43
Identity = 116/379 (30.61%), Postives = 195/379 (51.45%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           M +G++ A A F   +N +  +  ++ V+ ++DDILI+SK+E+EH +H+  VL+ L+   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           L    ++CEF   +V  + + +S +G       I+ V  W +P    E+R FLG   Y +
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
           +F+   S++  PL  L +K + + W+P    + + +K  LVS PVL   D S   ++ +D
Sbjct: 654 KFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETD 713

Query: 181 ASKKGLGCVLMQQGK-----VVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYS- 240
           AS   +G VL Q+        V Y S ++   + NY   D E++A + +LK WRHYL S 
Sbjct: 714 ASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLEST 773

Query: 241 -EKIQIFNDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKV 300
            E  +I  DH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR  
Sbjct: 774 IEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-- 833

Query: 301 AHSAALITKQAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKR 360
                ++ +  P+ +D +   I        + + Q+S+    + +++    ND  L+   
Sbjct: 834 -----IVDETEPIPKDSEDNSI--------NFVNQISITDDFKNQVVTEYTNDTKLL--N 893

Query: 361 LLVEAEQGEAFSISSDDGL 371
           LL   ++    +I   DGL
Sbjct: 894 LLNNEDKRVEENIQLKDGL 895

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 5.4e-188
Identity = 336/376 (89.36%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK
Sbjct: 251 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 370

Query: 121 RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
           RFVEDFSRIASPLTQLTRKG PFVWSPACE SFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 371 RFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSGNFVIYSD 430

Query: 181 ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWRHYLY EKIQI+
Sbjct: 431 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 490

Query: 241 NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
            DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Sbjct: 491 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 550

Query: 301 QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
           Q PLLRDF+RAEIAVS+ EVT+QLAQL++QPTLRQ+II AQLNDPYL EKR +VE EQGE
Sbjct: 551 QTPLLRDFERAEIAVSVGEVTAQLAQLTVQPTLRQKIIAAQLNDPYLAEKRRVVETEQGE 610

Query: 361 AFSISSDDGLTFDGCL 377
            FSISSDDGL F+G L
Sbjct: 611 DFSISSDDGLMFEGRL 626

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy TrEMBL
Match: A0A5A7VMR4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold550G00890 PE=4 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 5.4e-188
Identity = 337/376 (89.63%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK
Sbjct: 521 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 580

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 581 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 640

Query: 121 RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
           RFVEDFSRIASPLTQLTRKG PFVWSPACESSFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 641 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 700

Query: 181 ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWRHYLY EKIQI+
Sbjct: 701 ASKKGLGCVLMQQGKVVAYASRQLKVHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 760

Query: 241 NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
            DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Sbjct: 761 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 820

Query: 301 QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
           Q PLLRDF+RAEIAVS+ EVT+QLAQLS+QPTLRQ+II AQLNDPYLVEKR +VE  QGE
Sbjct: 821 QTPLLRDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 880

Query: 361 AFSISSDDGLTFDGCL 377
            FSIS DDGL F+G L
Sbjct: 881 DFSISFDDGLMFEGRL 896

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy TrEMBL
Match: A0A5A7T7M0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00720 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 1.6e-187
Identity = 335/376 (89.10%), Postives = 353/376 (93.88%), Query Frame = 0


Query: 1   MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
           MSFGLT A AVFMDLMN +FKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK
Sbjct: 580 MSFGLTKAPAVFMDLMNRLFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 639

Query: 61  LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
           LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 640 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 699

Query: 121 RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
           RFVEDFSRIA+PLTQLTRKGIPFVWSPACESSFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 700 RFVEDFSRIANPLTQLTRKGIPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 759

Query: 181 ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
           ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWRHYLY EKIQI+
Sbjct: 760 ASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIY 819

Query: 241 NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
            DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK
Sbjct: 820 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 879

Query: 301 QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
           Q PLL+DF+RAEIAVS+ EVT+QLAQLS+QPTLRQ+II AQLNDPYLVEKR +VE  QGE
Sbjct: 880 QTPLLKDFERAEIAVSVGEVTAQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 939

Query: 361 AFSISSDDGLTFDGCL 377
            FSISSDDGL F+G L
Sbjct: 940 DFSISSDDGLMFEGRL 955

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy TrEMBL
Match: A0A5A7TG62 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G001030 PE=4 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.7e-187
Identity = 336/376 (89.36%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
            MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN 
Sbjct: 720  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANN 779

Query: 61   LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
            LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEI+SFLGLAGYY+
Sbjct: 780  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIQSFLGLAGYYR 839

Query: 121  RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
            RFVEDFSRIASPLTQLTRKG PFVWSPACESSFQELK KLV+APVLTVPDGSG+FVIYSD
Sbjct: 840  RFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGNFVIYSD 899

Query: 181  ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
            ASKKGLGCVLMQQGKVVAY SRQLK +EQNYPT DLELVA VFALKIWRHYLY EKIQI+
Sbjct: 900  ASKKGLGCVLMQQGKVVAYASRQLKIYEQNYPTHDLELVAVVFALKIWRHYLYGEKIQIY 959

Query: 241  NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
             DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSA LITK
Sbjct: 960  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAVLITK 1019

Query: 301  QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
            Q PLLRDF+RAEIAVS+ EVTSQLAQLS+QPTLRQ+II AQLNDPYLVEKR +VE  QGE
Sbjct: 1020 QTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIAAQLNDPYLVEKRRMVETGQGE 1079

Query: 361  AFSISSDDGLTFDGCL 377
             FSISSDDGL F+G L
Sbjct: 1080 DFSISSDDGLMFEGRL 1095

[Close]

BLAST of Cmc04g0107801.1 vs. ExPASy TrEMBL
Match: A0A5A7VBY3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold616G00920 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.5e-187
Identity = 336/376 (89.36%), Postives = 350/376 (93.09%), Query Frame = 0


Query: 1    MSFGLTNALAVFMDLMNIVFKDFLDTFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 60
            MSFGLTNA AVFMDLMN VFKDFLD+FVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK
Sbjct: 939  MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 998

Query: 61   LYAKFSQCEFWLKKVTCLNHVVSSEGVFVDPAKIEAVTSWPRPSTVSEIRSFLGLAGYYK 120
            LYAKFS+CEFWL+KVT L HVVSSEGV VDPAKIEAVT+WPRPSTVSEIRSFLGLAGYY+
Sbjct: 999  LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 1058

Query: 121  RFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPVLTVPDGSGSFVIYSD 180
            RFVEDFSR ASPLTQLTRKG PFVWSPACESSFQELK KLV+APVLTVPDGSGSFVIYSD
Sbjct: 1059 RFVEDFSRKASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSD 1118

Query: 181  ASKKGLGCVLMQQGKVVAYTSRQLKCHEQNYPTDDLELVAEVFALKIWRHYLYSEKIQIF 240
            ASKKGLGCVLMQQGKVVAY SRQLK HEQNYPT DLEL A VFALKIWR YLY EKIQIF
Sbjct: 1119 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRRYLYGEKIQIF 1178

Query: 241  NDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITK 300
             DHKSLKYFFTQKELNMRQRRWL+LVKDYDCEI+YHP KANVVADALSRKVAHSAALITK
Sbjct: 1179 TDHKSLKYFFTQKELNMRQRRWLKLVKDYDCEIMYHPSKANVVADALSRKVAHSAALITK 1238

Query: 301  QAPLLRDFDRAEIAVSIREVTSQLAQLSMQPTLRQRIIVAQLNDPYLVEKRLLVEAEQGE 360
            Q PLLRDF+RAEIAVS+ EVTSQLAQLS+QPTLRQ+IIVAQLNDPYLVEKR +VE   GE
Sbjct: 1239 QTPLLRDFERAEIAVSVGEVTSQLAQLSVQPTLRQKIIVAQLNDPYLVEKRRMVETGPGE 1298

Query: 361  AFSISSDDGLTFDGCL 377
             FSIS DDGL F+GCL
Sbjct: 1299 NFSISPDDGLMFEGCL 1314

[Close]

BLAST of Cmc04g0107801.1 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 8.4e-24
Identity = 52/131 (39.69%), Postives = 77/131 (58.78%), Query Frame = 0


Query: 48  HLHQVLETLRANKLYAKFSQCEFWLKKVTCL--NHVVSSEGVFVDPAKIEAVTSWPRPST 107
           HL  VL+    ++ YA   +C F   ++  L   H++S EGV  DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSEIRSFLGLAGYYKRFVEDFSRIASPLTQLTRKGIPFVWSPACESSFQELKHKLVSAPV 167
            +E+R FLGL GYY+RFV+++ +I  PLT+L +K     W+     +F+ LK  + + PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 168 LTVPDGSGSFV 177
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc04g0107801.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0063793.1	1.1e-187	89.36	pol protein [Cucumis melo var. makuwa]	[more]
KAA0066951.1	1.1e-187	89.63	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037369.1	3.3e-187	89.10	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040547.1	5.6e-187	89.36	pol protein [Cucumis melo var. makuwa]	[more]
KAA0050760.1	7.3e-187	88.83	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc04g0107801.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	1.4e-55	39.31	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	3.9e-50	37.24	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P10401	6.7e-50	35.64	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q8I7P9	9.6e-49	33.44	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	1.2e-43	30.61	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc04g0107801.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6R2	5.4e-188	89.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5A7VMR4	5.4e-188	89.63	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7T7M0	1.6e-187	89.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5A7TG62	2.7e-187	89.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7VBY3	3.5e-187	89.36	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]

BLAST of Cmc04g0107801.1 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.4e-24	39.69	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..74 e-value: 7.7E-10 score: 38.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 92..182 e-value: 1.2E-31 score: 110.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 6.1E-28 score: 99.3
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 173..269 e-value: 3.2E-29 score: 101.3
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 80..295
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 80..295
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 9.50573E-33 score: 118.852
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 176..291 e-value: 1.45284E-52 score: 168.825
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..275

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0107801	Cmc04g0107801	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0107801.1-exon	Cmc04g0107801.1-exon-CMiso1.1chr04:26401149..26402279	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0107801.1-cds	Cmc04g0107801.1-cds-CMiso1.1chr04:26401149..26402279	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0107801.1	Cmc04g0107801.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding