Cmc04g0104811.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc04g0104811.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr04: 22946645 .. 22949014 (+)
Sequence length	2370
RNA-Seq Expression	Cmc04g0104811.1
Synteny	Cmc04g0104811.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTTAATCAAAGCACATCGAAGACACTAAGAAACAAAGAAATGTGAAAGTTTAAACAGTTCAATTAATAACTGATATTTTTAACTTATATTAATTATCAATCCAATACAGAACATGGCACATTTAGATATTATAAACAAACAGGGGAAGAATGTAATTTGGCTTTTACAAACTTCACTAAAAGGCAATTTCCACATTTTAATACAACAAAGTACATAAACTAGCTATATAGAACGACATTAAAATCAACACTTGAAGCCTTCGCTCTATATATTTATAGAAGTGGTACTTTACATATAATATTATTTTGATAAAGCAGCCACCAGCTTCTCCTTCAATTGTTCTGCAGCACCACCTTCAGTTCTAATGAAGAACGAGTGAATAACCTTGTCATTGTCAGTGCTAGCCTTGACGTTCGATTCTTGAGCTTCAATTTGATGTTCCCTAAATGTTTTGATTACTTTAGAAACAGGGTGCGAGTCCAATGGACAACTTACCCTCACAACAGCATCCTCTTCTCTTGCGTGAAAATCGATCTCTGTGTTTTTCTCCCTGCCACTGGCGATCTGTTTTTCAGTCTCCATAACCTTGATTTTCATTTGGAGATCAGTAATATAGGTAATAGCATCGCCAAGAAGAGAAGCCTTGTCCATCTTAGAGATATTTGGGACAACAGCCCTTAATGCATAGAATCGTTGGTTAAGTTTCTCACGTCTCTGTCGCTCGGCTTCCACATGATTCAATGGTTCTTCTCTCCCATTAGCAGGTTTTCTCCCTCTCTTCCTAGGTTTTCTGTCATCTCCTTGAGGAGACGACTCATCCCTCGGGAACTCCATAGTCGAAAGCCTGGTTTGAGCATTGAAACCCCCCACAACTTCTTGGTTTCCATGTGGAAACATCTTTGCATCATTATCATCGCCTCGGCAACCGTTTGAAGAGTTCCCAAATATATGATTACCACCTAAACCTTGCAGCTCATAAGCTTCTGATGAATAATTAGTATCATCTTCCAACTTCGGTGAAAAATTAATACTAAGCGATCGAGGTTTTGTTCCACCTAAACTTAGTTCATGTCCGAAGATCCTGGGGAAGGCCTTCAATTGGGCAGTATTTGATCCCCCAAAGGCAGCTCTAACCAACTCTAGAACAGCCTGATCTTCAGGAATTGATTTAATAGATCCAAGTTCAACAACTCCCAACTTCACCGGTACAAACACCAATGTCTGCAAACCAGCCACTTTAGCTAGAAAACCTCTCGATTGGTAATTACGCAAACAACTCGTTGCATCTGAAGCCCATATGGACTTACCGGATTTGTAAGACTCCCCAAGACTGCTCCCAGAGTCGCACATAAACTTGTAGTACTTGGAAGTTAAGTAAAGCATCTCGATATCCGATGCTTCATCTCTCCTTGCTCCATATCCATCTTCATCAGACCGACCAAATGAGGATTGAAGCATTTGAAGCACTTGCCTCTTCAATTCCTCTTTCTTCCCTCCTTGAGCATCCCCACTAGAAATTCCAATCTCAATCTTTGAATCGTTACAGTTCCCGTCACCCCAAATCAAAGCTAAAGCTCCAGATTTCAAGGTAACCACACGCCAAAAGATTGCATAATTCCAACTTGAACCATTCAAAACTTGGCTTAACCCTTGATTCACACTTGAATCACCAAGAGAAAATTGCAAGGAATCTTGCGGTAAGATATTGATAGATGCCAATGAAATCAAGAACTCACAAGCTTCACTGCCAACAATTGATTCCACCACAACTCTCTTTTCTTCACTAGCCCAAAATTTTTCACCCATCTTCCAGAAATCAAATCAGCAGAACAAAGAAACCCAACGCAATCCAATCCCTCTCTAATTCTAAAATCGCCTCCCCATAGCAAGAAAATGTCTAAATTACTCAAATAAGGAAAGAAAATCGCAATGGAATTGAATTTCGAGGAAACCCCTTTTTCAATTCCTCATCAAACAACAAGTAACTCTCCAAATTAAGTTATACAGAGCCAGAAACTGAAGGCAGGGAAGCGACGAAATGAATCCAAAATCCAGGAATACTCGAAGAACAGGGTTGAAAAACTGACCTGAAATTAAAGACGGATCTGAATTTGTTATGATGGGTGGCCTCAATTTCGCTCAAAAATCAGAAGAAAAACAAGGGATTGGAATTTCGGCTATCTGATATAGAATCTAGGTTTCTCGTTCTCCATCAATTTGTTGCTAGAAGCTGGAGTGTATAAATAATTTTTATTTATTATTATTTCCTATGCTGGAAGCGCACCAATTACCTTAGCTTTTTTTTTTTTCTTTTCATGTGATTGATATAAAAAAAAACATGTCAGAAAATTAAATACATTAATAATTG

mRNA sequence

TGGTTAATCAAAGCACATCGAAGACACTAAGAAACAAAGAAATGTGAAAGTTTAAACAGTTCAATTAATAACTGATATTTTTAACTTATATTAATTATCAATCCAATACAGAACATGGCACATTTAGATATTATAAACAAACAGGGGAAGAATGTAATTTGGCTTTTACAAACTTCACTAAAAGGCAATTTCCACATTTTAATACAACAAAGTACATAAACTAGCTATATAGAACGACATTAAAATCAACACTTGAAGCCTTCGCTCTATATATTTATAGAAGTGGTACTTTACATATAATATTATTTTGATAAAGCAGCCACCAGCTTCTCCTTCAATTGTTCTGCAGCACCACCTTCAGTTCTAATGAAGAACGAGTGAATAACCTTGTCATTGTCAGTGCTAGCCTTGACGTTCGATTCTTGAGCTTCAATTTGATGTTCCCTAAATGTTTTGATTACTTTAGAAACAGGGTGCGAGTCCAATGGACAACTTACCCTCACAACAGCATCCTCTTCTCTTGCGTGAAAATCGATCTCTGTGTTTTTCTCCCTGCCACTGGCGATCTGTTTTTCAGTCTCCATAACCTTGATTTTCATTTGGAGATCAGTAATATAGGTAATAGCATCGCCAAGAAGAGAAGCCTTGTCCATCTTAGAGATATTTGGGACAACAGCCCTTAATGCATAGAATCGTTGGTTAAGTTTCTCACGTCTCTGTCGCTCGGCTTCCACATGATTCAATGGTTCTTCTCTCCCATTAGCAGGTTTTCTCCCTCTCTTCCTAGGTTTTCTGTCATCTCCTTGAGGAGACGACTCATCCCTCGGGAACTCCATAGTCGAAAGCCTGGTTTGAGCATTGAAACCCCCCACAACTTCTTGGTTTCCATGTGGAAACATCTTTGCATCATTATCATCGCCTCGGCAACCGTTTGAAGAGTTCCCAAATATATGATTACCACCTAAACCTTGCAGCTCATAAGCTTCTGATGAATAATTAGTATCATCTTCCAACTTCGGTGAAAAATTAATACTAAGCGATCGAGGTTTTGTTCCACCTAAACTTAGTTCATGTCCGAAGATCCTGGGGAAGGCCTTCAATTGGGCAGTATTTGATCCCCCAAAGGCAGCTCTAACCAACTCTAGAACAGCCTGATCTTCAGGAATTGATTTAATAGATCCAAGTTCAACAACTCCCAACTTCACCGGTACAAACACCAATGTCTGCAAACCAGCCACTTTAGCTAGAAAACCTCTCGATTGGTAATTACGCAAACAACTCGTTGCATCTGAAGCCCATATGGACTTACCGGATTTGTAAGACTCCCCAAGACTGCTCCCAGAGTCGCACATAAACTTGTAGTACTTGGAAGTTAAGTAAAGCATCTCGATATCCGATGCTTCATCTCTCCTTGCTCCATATCCATCTTCATCAGACCGACCAAATGAGGATTGAAGCATTTGAAGCACTTGCCTCTTCAATTCCTCTTTCTTCCCTCCTTGAGCATCCCCACTAGAAATTCCAATCTCAATCTTTGAATCGTTACAGTTCCCGTCACCCCAAATCAAAGCTAAAGCTCCAGATTTCAAGGTAACCACACGCCAAAAGATTGCATAATTCCAACTTGAACCATTCAAAACTTGGCTTAACCCTTGATTCACACTTGAATCACCAAGAGAAAATTGCAAGGAATCTTGCGGTAAGATATTGATAGATGCCAATGAAATCAAGAACTCACAAGCTTCACTGCCAACAATTGATTCCACCACAACTCTCTTTTCTTCACTAGCCCAAAATTTTTCACCCATCTTCCAGAAATCAAATCAGCAGAACAAAGAAACCCAACGCAATCCAATCCCTCTCTAATTCTAAAATCGCCTCCCCATAGCAAGAAAATGTCTAAATTACTCAAATAAGGAAAGAAAATCGCAATGGAATTGAATTTCGAGGAAACCCCTTTTTCAATTCCTCATCAAACAACAAGTAACTCTCCAAATTAAGTTATACAGAGCCAGAAACTGAAGGCAGGGAAGCGACGAAATGAATCCAAAATCCAGGAATACTCGAAGAACAGGGTTGAAAAACTGACCTGAAATTAAAGACGGATCTGAATTTGTTATGATGGGTGGCCTCAATTTCGCTCAAAAATCAGAAGAAAAACAAGGGATTGGAATTTCGGCTATCTGATATAGAATCTAGGTTTCTCGTTCTCCATCAATTTGTTGCTAGAAGCTGGAGTGTATAAATAATTTTTATTTATTATTATTTCCTATGCTGGAAGCGCACCAATTACCTTAGCTTTTTTTTTTTTCTTTTCATGTGATTGATATAAAAAAAAACATGTCAGAAAATTAAATACATTAATAATTG

Coding sequence (CDS)

ATGTTCCCTAAATGTTTTGATTACTTTAGAAACAGGGTGCGAGTCCAATGGACAACTTACCCTCACAACAGCATCCTCTTCTCTTGCGTGAAAATCGATCTCTGTGTTTTTCTCCCTGCCACTGGCGATCTGTTTTTCAGTCTCCATAACCTTGATTTTCATTTGGAGATCAGTAATATAGGTAATAGCATCGCCAAGAAGAGAAGCCTTGTCCATCTTAGAGATATTTGGGACAACAGCCCTTAA

Protein sequence

MFPKCFDYFRNRVRVQWTTYPHNSILFSCVKIDLCVFLPATGDLFFSLHNLDFHLEISNIGNSIAKKRSLVHLRDIWDNSP

Homology

The following BLAST results are available for this feature:

BLAST of Cmc04g0104811.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0104811.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0104811.1 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc04g0104811.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..29 score: 5.0

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc04g0104811	Cmc04g0104811	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0104811.1-exon	Cmc04g0104811.1-exon-CMiso1.1chr04:22946645..22949014	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0104811.1-five_prime_utr	Cmc04g0104811.1-five_prime_utr-CMiso1.1chr04:22946645..22947081	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0104811.1-cds	Cmc04g0104811.1-cds-CMiso1.1chr04:22947082..22947327	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc04g0104811.1-three_prime_utr	Cmc04g0104811.1-three_prime_utr-CMiso1.1chr04:22947328..22949014	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc04g0104811.1	Cmc04g0104811.1-protein	polypeptide