Cmc03g0085111.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc03g0085111.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr03: 29016223 .. 29018500 (+)
Sequence length2278
RNA-Seq ExpressionCmc03g0085111.1
SyntenyCmc03g0085111.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTTGGATCTCTCTCCTTTTGCCCCACAAGAATCTGTAAAAGATCTTACAGATAGGAAAGGAAATATGAACAATCTTCATATCAAAATTATTACATGAATAGAACTCATGACCCCACTATCTCTTTCGGCTTTTTTCTTTCTTCCTTTTTTTTTTTTTTTTTTTTTGGAGCTCGAACTTTGTACCTTAGCCATCATACAAAATTGTATTTGAATCATGGAATGGAAACTCTGAGTTAGGCTTGTTGGAGACGACTAATACTTCATATATATCTCAATTATTTTTCCAAAATCAAATGATGTAGTGCACCGAAATTGACAATTGCACACTGGGAATTGAGATCATCAAACAAAAGAAGTCATTTTGTGTTGGCTTCTAAATGGTTGGTTGGTTCCATCATTACCAAATTAAATTCCTTTTTTCACAATGCTCATCGGATCGGATCCTACTTGCCCCAACCCTACGAACACACTGACAAATTCCTCAATGATTCACACAAATCCAGAAATGGAATTTTGCATCATTGTCAGATTCTGACGCCCGAAAAGAAATTAGAATAAATACCAAAAAGTAATTATTAAAAAGAAAGGTAAGTACCAAATGAGTTCAGAATAAATGTTCCAACAAAACAAGAATCGAGGAATTTATTTTCAATATTTTGGCTACTTAGTCAAAAATGACTTGGGTGCAAATGGTAAAAGTTATAATAATATTTACATGGACAGAGAAGAACAGCATGATCGAGGGTCTCCAAGAAAATTCCTCCTTTTTGCTTCCCAATTTATTCAAAAGAAGATTTTGAATTATTTGGGAATATTTTGAAGAACAGTGGGAATCAAAACCCAGATTTTGAATTAGTCACAGCGTAGCTTTTACTTCTTGGATAAACCAAATCAGCTTTATCTTCAACGCTTTCTTCAAATTCACAAGCAGTATCCTCATCAATCCTACCCATTCCGACACTGCAACTTTTAGGCAATCCTTTGGATTGTCTTAGCCTCTGTGGATAAAGAATATCAGCATCGATATCTTTAATGTCCAAGCTTCTAACGGAGGCGGCCTTAACAAGCTCTCTGAAATCGTCGGTTTCATTGGATCTGCAAGAGCGAGAGCTGTAGCTTTTGGGCAAGATGGGCAATTGGCCAGATGGGTAGCCATGAGACACTCTGGGTGCACAATCCATGATGCTTTTTACATAGAAATCCTTGGCTTTCCCTAGAGCTCTGATGGGTAGTGTAACGAATCGCATGAATTTGTTTTGATTTTGTGCTTTTTTGGTTCTCATTTCGGAAGCCCACCAAAGTGTTCGATGAAATGACTGAAAGAGATTTTGAAGCAGAAACGGTTGATTACAGGGGAGGGAATCAGCTCGGAATCGAAATTTGATCGATGGATCGAATAAATCAGGTTTGAGAAACGAAATCAGGAAGAAAAAGGGGGAATTGAAAGCACACTGATTTGGAGGAAATTGGGGGATGGGACCGAGCAGGTGGGGGAATTTTGGCGTAAGACGTCGGCCAGGGTTGAAATAATGGTGGAGTTGACTTGTGAAGATTTCCGACATGTGACTTTCAAATGTTCTTAAACCTTATCCAATTCATCTAGATGAATGAATCGTTGCCTTGTCAAAGATAAAGAAAGGTAGATTGTAACTTTGAAATTTGAATTTTGAATTAGATTTGGGTGAAATTCATCTTAATCAATTTTTAAAAACATTTTTTAAAAAATGGGTTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTACAAATTACAAAACCTATTTTCTGTTTTTTACACTATAAAGATCTTTATCACTTCTCTGTTTTCTTCAAGTTTCTTTCCTCTTTGAATGTGAAAAATGTTTTGGTCTTCAGCCTTAATAATTTTCATAAAAACAAAGTATTTTACAATTTAAACACATGAAGATCATGAAGATTAAATTCCTGTTGGCAGCCGCATAGAATAGATAGAAATGGTAATGCTAATACACATATTCTAGAGAGAACCTACAATTTGGTAGAAACCCCCAACCACAATTAAAGTCTAAAACTAGCCGCCCCCCTCCTTAACTAATTTCTCACTTTTGGACTCTTCCTTTCCTTTTCTCTTTCTTTATTCCATTATTGATTGCCCTCCCCCTCTCTTGTGTTTCATTCTAATGGAAATTGCCATCAAAATGTTGCCCCCACATGTTGATGATACATGTGAAATATTAATCCAAAATAGATAGATTATTATCCACGTAAACACATATAATAATATATCTTAGTCTATC

mRNA sequence

TCATTTGGATCTCTCTCCTTTTGCCCCACAAGAATCTGTAAAAGATCTTACAGATAGGAAAGGAAATATGAACAATCTTCATATCAAAATTATTACATGAATAGAACTCATGACCCCACTATCTCTTTCGGCTTTTTTCTTTCTTCCTTTTTTTTTTTTTTTTTTTTTGGAGCTCGAACTTTGTACCTTAGCCATCATACAAAATTGTATTTGAATCATGGAATGGAAACTCTGAGTTAGGCTTGTTGGAGACGACTAATACTTCATATATATCTCAATTATTTTTCCAAAATCAAATGATGTAGTGCACCGAAATTGACAATTGCACACTGGGAATTGAGATCATCAAACAAAAGAAGTCATTTTGTGTTGGCTTCTAAATGGTTGGTTGGTTCCATCATTACCAAATTAAATTCCTTTTTTCACAATGCTCATCGGATCGGATCCTACTTGCCCCAACCCTACGAACACACTGACAAATTCCTCAATGATTCACACAAATCCAGAAATGGAATTTTGCATCATTGTCAGATTCTGACGCCCGAAAAGAAATTAGAATAAATACCAAAAAGTAATTATTAAAAAGAAAGGTAAGTACCAAATGAGTTCAGAATAAATGTTCCAACAAAACAAGAATCGAGGAATTTATTTTCAATATTTTGGCTACTTAGTCAAAAATGACTTGGGTGCAAATGGTAAAAGTTATAATAATATTTACATGGACAGAGAAGAACAGCATGATCGAGGGTCTCCAAGAAAATTCCTCCTTTTTGCTTCCCAATTTATTCAAAAGAAGATTTTGAATTATTTGGGAATATTTTGAAGAACAGTGGGAATCAAAACCCAGATTTTGAATTAGTCACAGCGTAGCTTTTACTTCTTGGATAAACCAAATCAGCTTTATCTTCAACGCTTTCTTCAAATTCACAAGCAGTATCCTCATCAATCCTACCCATTCCGACACTGCAACTTTTAGGCAATCCTTTGGATTGTCTTAGCCTCTGTGGATAAAGAATATCAGCATCGATATCTTTAATGTCCAAGCTTCTAACGGAGGCGGCCTTAACAAGCTCTCTGAAATCGTCGGTTTCATTGGATCTGCAAGAGCGAGAGCTGTAGCTTTTGGGCAAGATGGGCAATTGGCCAGATGGGTAGCCATGAGACACTCTGGGTGCACAATCCATGATGCTTTTTACATAGAAATCCTTGGCTTTCCCTAGAGCTCTGATGGGTAGTGTAACGAATCGCATGAATTTGTTTTGATTTTGTGCTTTTTTGGTTCTCATTTCGGAAGCCCACCAAAGTGTTCGATGAAATGACTGAAAGAGATTTTGAAGCAGAAACGGTTGATTACAGGGGAGGGAATCAGCTCGGAATCGAAATTTGATCGATGGATCGAATAAATCAGGTTTGAGAAACGAAATCAGGAAGAAAAAGGGGGAATTGAAAGCACACTGATTTGGAGGAAATTGGGGGATGGGACCGAGCAGGTGGGGGAATTTTGGCGTAAGACGTCGGCCAGGGTTGAAATAATGGTGGAGTTGACTTGTGAAGATTTCCGACATGTGACTTTCAAATGTTCTTAAACCTTATCCAATTCATCTAGATGAATGAATCGTTGCCTTGTCAAAGATAAAGAAAGGTAGATTGTAACTTTGAAATTTGAATTTTGAATTAGATTTGGGTGAAATTCATCTTAATCAATTTTTAAAAACATTTTTTAAAAAATGGGTTTTCTTTTCTTTCTTTCTTTCTTTCTCTTTTTTACAAATTACAAAACCTATTTTCTGTTTTTTACACTATAAAGATCTTTATCACTTCTCTGTTTTCTTCAAGTTTCTTTCCTCTTTGAATGTGAAAAATGTTTTGGTCTTCAGCCTTAATAATTTTCATAAAAACAAAGTATTTTACAATTTAAACACATGAAGATCATGAAGATTAAATTCCTGTTGGCAGCCGCATAGAATAGATAGAAATGGTAATGCTAATACACATATTCTAGAGAGAACCTACAATTTGGTAGAAACCCCCAACCACAATTAAAGTCTAAAACTAGCCGCCCCCCTCCTTAACTAATTTCTCACTTTTGGACTCTTCCTTTCCTTTTCTCTTTCTTTATTCCATTATTGATTGCCCTCCCCCTCTCTTGTGTTTCATTCTAATGGAAATTGCCATCAAAATGTTGCCCCCACATGTTGATGATACATGTGAAATATTAATCCAAAATAGATAGATTATTATCCACGTAAACACATATAATAATATATCTTAGTCTATC

Coding sequence (CDS)

ATGTTCCAACAAAACAAGAATCGAGGAATTTATTTTCAATATTTTGGCTACTTAGTCAAAAATGACTTGGGTGCAAATGGTAAAAGTTATAATAATATTTACATGGACAGAGAAGAACAGCATGATCGAGGGTCTCCAAGAAAATTCCTCCTTTTTGCTTCCCAATTTATTCAAAAGAAGATTTTGAATTATTTGGGAATATTTTGA

Protein sequence

MFQQNKNRGIYFQYFGYLVKNDLGANGKSYNNIYMDREEQHDRGSPRKFLLFASQFIQKKILNYLGIF
Homology
The following BLAST results are available for this feature:
BLAST of Cmc03g0085111.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0085111.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0085111.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0085111.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc03g0085111Cmc03g0085111gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0085111.1-exonCmc03g0085111.1-exon-CMiso1.1chr03:29016223..29018500exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0085111.1-five_prime_utrCmc03g0085111.1-five_prime_utr-CMiso1.1chr03:29016223..29016838five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0085111.1-cdsCmc03g0085111.1-cds-CMiso1.1chr03:29016839..29017045CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0085111.1-three_prime_utrCmc03g0085111.1-three_prime_utr-CMiso1.1chr03:29017046..29018500three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc03g0085111.1Cmc03g0085111.1-proteinpolypeptide