Cmc03g0084711.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc03g0084711.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr03: 28811923 .. 28812985 (+)
Sequence length1013
RNA-Seq ExpressionCmc03g0084711.1
SyntenyCmc03g0084711.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAAATTTTGTCCTAATTTAACTACTGAAACTAAACTCCTAATTAACATCTTATAATCGGATTACTAGAAACAAGAACAGCGAATCATGACTAATCACATAATAGAAACACAATCTTCAAAGCGTAAAAACAGCAATATATATGTGTATTAGATTGAAAACCGTTAAGGGTAAATTAAATTTTTGTATTATATATGGGATCCAAGACAATAGTTTAACTCATCCCATTGTAGAACCCAAGTGACACGAGTCACGAGGTACCAAAATATAGAAAACTATTCCGATAACGTTTTCATCTATCATTTGCACACAGCACAAAGTATGAAAAATGAATGTGATTACTTATAGAAACGTTTATATATACGAAAAGATGGATGATGTAAATGTAAACGAAAAGGAAGAAAGGAGGGGAATAAGAAAAGGAGTAGTAATCAATGAGTCAACGATTGTGAAGTGGGTCTGAAGCATTTGGAACTTTTCTCTTACTTGACTGTAAAACATAGAATGGCGGCCTCATCCTACGGTGGTGGAGTTTCTGAGACGACGATGGGGTTGCTCTTGCTCCTTCTTTCTTCAACTTCACAACATTAACATTATGGAGGATCGGAGATGAAGAAGAAATCAGTAGCAATAACGTCAAAAAAGTCACCGCCGTTAATATTGTTATTATTATACCACGCGGCTTCACACCGGCGCCTGCAGTAGGAGACTTCTTCAAGAACCGCATCGATGAAAAAAACACAAAATGTGGGGATATAATTTGGTAAGGAAGGAAGAATTATTAAAGAGGGGGAATTAGCTAAAGGGGTTATTATATATACAAATAAAAAAAGTTTGTTCCCATCCTGGAGCTAACACACACACATCTTACCCACTCAAGCCTTCAAATTATGAGTTGTCATGTAGCAGATTGTTTTTCAAAATTTGATGAAATGTCTTAAAATCAAACTATAAAAAAGAAAAGAGTAGGGTTGAGAAAGAAAGAAAGTCCATTAGTTGTGTGGATTTGGCGCTATTAAGGGTCACGGGACTAATAATTCAATTTTATTGAATTAAGGAAGAC

mRNA sequence

TTAAAATTTTGTCCTAATTTAACTACTGAAACTAAACTCCTAATTAACATCTTATAATCGGATTACTAGAAACAAGAACAGCGAATCATGACTAATCACATAATAGAAACACAATCTTCAAAGCGTAAAAACAGCAATATATATGTGTATTAGATTGAAAACCGTTAAGGGTAAATTAAATTTTTGTATTATATATGGGATCCAAGACAATAGTTTAACTCATCCCATTGTAGAACCCAAGTGACACGAGTCACGAGGTACCAAAATATAGAAAACTATTCCGATAACGTTTTCATCTATCATTTGCACACAGCACAAAGTATGAAAAATGAATGTGATTACTTATAGAAACGTTTATATATACGAAAAGATGGATGATGTAAATGTAAACGAAAAGGAAGAAAGGAGGGGAATAAGAAAAGGAGTAGTAATCAATGAGTCAACGATTGTGAAAATGGCGGCCTCATCCTACGGTGGTGGAGTTTCTGAGACGACGATGGGGTTGCTCTTGCTCCTTCTTTCTTCAACTTCACAACATTAACATTATGGAGGATCGGAGATGAAGAAGAAATCAGTAGCAATAACGTCAAAAAAGTCACCGCCGTTAATATTGTTATTATTATACCACGCGGCTTCACACCGGCGCCTGCAGTAGGAGACTTCTTCAAGAACCGCATCGATGAAAAAAACACAAAATGTGGGGATATAATTTGGTAAGGAAGGAAGAATTATTAAAGAGGGGGAATTAGCTAAAGGGGTTATTATATATACAAATAAAAAAAGTTTGTTCCCATCCTGGAGCTAACACACACACATCTTACCCACTCAAGCCTTCAAATTATGAGTTGTCATGTAGCAGATTGTTTTTCAAAATTTGATGAAATGTCTTAAAATCAAACTATAAAAAAGAAAAGAGTAGGGTTGAGAAAGAAAGAAAGTCCATTAGTTGTGTGGATTTGGCGCTATTAAGGGTCACGGGACTAATAATTCAATTTTATTGAATTAAGGAAGAC

Coding sequence (CDS)

ATGAATGTGATTACTTATAGAAACGTTTATATATACGAAAAGATGGATGATGTAAATGTAAACGAAAAGGAAGAAAGGAGGGGAATAAGAAAAGGAGTAGTAATCAATGAGTCAACGATTGTGAAAATGGCGGCCTCATCCTACGGTGGTGGAGTTTCTGAGACGACGATGGGGTTGCTCTTGCTCCTTCTTTCTTCAACTTCACAACATTAA

Protein sequence

MNVITYRNVYIYEKMDDVNVNEKEERRGIRKGVVINESTIVKMAASSYGGGVSETTMGLLLLLLSSTSQH
Homology
The following BLAST results are available for this feature:
BLAST of Cmc03g0084711.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0084711.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0084711.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc03g0084711.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc03g0084711Cmc03g0084711gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084711.1-exonCmc03g0084711.1-exon-CMiso1.1chr03:28811923..28812375exon
Cmc03g0084711.1-exonCmc03g0084711.1-exon-CMiso1.1chr03:28812426..28812985exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084711.1-five_prime_utrCmc03g0084711.1-five_prime_utr-CMiso1.1chr03:28811923..28812250five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084711.1-cdsCmc03g0084711.1-cds-CMiso1.1chr03:28812251..28812375CDS
Cmc03g0084711.1-cdsCmc03g0084711.1-cds-CMiso1.1chr03:28812426..28812513CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc03g0084711.1-three_prime_utrCmc03g0084711.1-three_prime_utr-CMiso1.1chr03:28812514..28812985three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc03g0084711.1Cmc03g0084711.1-proteinpolypeptide