Cmc03g0070581.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc03g0070581.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein ROOT PRIMORDIUM DEFECTIVE 1
Location	CMiso1.1chr03: 16448813 .. 16451404 (-)
Sequence length	2592
RNA-Seq Expression	Cmc03g0070581.1
Synteny	Cmc03g0070581.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGATAGTTAACAAACGTCCTCATCTTTTCACAACTTTTGGTCATCCATCCGAATTAGATAAAAAGATGTGCGTGTTCTTTTAAAAGAAAAACGAAATTAGCTTTTGTTAACACACGTGCAGCCCCCACACCAAAGACCAAACACCCATTCTCTCACATCTTCTGTCTCTGCCTGCAACCACACCAAGAAACCACCGTCCGCCGGCAGCCTCTAGTCGTCAGACTTCACGCGCGCCAGTTGGAGAGTCGGCGGAGACCGCGCCGTCCGTGGGTAGGTTCCGACTATCTCCATTTCTCTCTCTAACCCAGATCTGTGTAGCCAGCCGCCGCCGCCATCGCCATTGTTCTAGTTTTGGCTAAGACTTAGGATGTTTTCTCGGCTTAAGCTTAATCCACCACTGGATGGATGCTTAATACTTGTCACCCATGGTGTTTAGTTTTAGATCTGAGTTTTGGACAACCGTGCAAGAGCGTTTAGACCGTTCTGGTAAGTAGTAAGGCTTTGAGATGGCTGGATTCATTGTAGTTTTCAGGAGTTCTGGGTTTTGATCTTAGGTTTTGAATATTTGTAGGATCGAATTTACTGCTCGGGGATTTTGAATTAGCGTTGGTCTTAGTCACACCTGGAGACCTTTAAACACGAGTTTTATACTGTTGTTTAAGCCAATAGTTTGGAATTTAAGCTGGTATTTGGTGTGTGATAGAGGTTAATCCAGGATTCTTGCTCTACATCAGAAGGGATATTATTTTCTTGTTACTGGGCTTTTAACATTGAGGTAAGTGGGCTCACTTCTGAAACGAAGCTAGGTTGGGATCTGTGTGCTGATAGGATAAACTTTGTGTGAATTTTAATATGATATCTGGTTGATGTATGTTAGATGTGTACGTATGATGAAATGATCGATGTTACAAAGGCTCCGGCATCATGAAGACTCCTTCAAGTTTAAGGTTGATGTTTTCTTTATGTTTTGTGGGCAGTTGATCGAATTCATATGTTGTTGATGGATGGTAGAAGATGGTGGCTTGGTTGTTTAGCAGGCTTAAACTCTTTGGTTTCTCATGTAAAAACCAGACAGGCTTGAGTTTAAATTACCTGCAAGGTCGTTGTCTAGTAAACATAAAACTAAAATGGGTGAAAGATAAAGACTTAGATACTGTAGTGAGTGCTGAGAAAGACCTTAAGGCTGTTTGCTTTCTTGTGTCTATAATCTCTTCAAGTCCTGAAAATTGCTTACCGGTCTACCATCTGCGCTGCCATCGTCGGCAGCTTGGTCTTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATACCCTTCCATCTTTCACGAGTCACATATTCTCGATAGTGCAGGCACTCGTGTGCCATCATTTTGCTTAACTCCAGAAGCTAGGGAACTTCACGAGGAGCAAATCGTTGTCCTTCGTCAGTGTTGGACAGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACTAGTGGTTGCACACTTCCTCTACAGACAATTGACCAGTTAAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCGTTCCATATAACCATGACTTATTTTCGTTCATCCGGCTCCAAGATGATCGCATTGGGCTGAAACTTCTGTTGTGGGATAATGACCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAAATGGAAGAAGATATAAGAAATGGCTATTTGGCCTTTCCAATTGGATTTACAAGGGGTTTTGGACTGAATAGAAAATGCATGGATTGGTTAAAAGATTGGCAGAAGCTCCCTTACACTTCTCCATATTGTGATGCCTCTCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACTGAACGAAAGAACGTAAGCAACCTTCGAAAACCGTTCTCTTTGCCTCAGAAGTTCACAAAAGTGTTCGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGGATGATACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGATAAGCTTCTACAGAAACATCCTCTTGTTAGTATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGCAGAGGTTTGTACAAAAAAGATCCATCTGGTCACTTTTATCATGATGAAGTGAATGAAACTCGATATAGTTCTGAAGAAGTGTCCGACCATAACATGCTTTCGGAATATGATTCGGAATCAGATGGTCCGATTGACAACAACTGCTAAAGAAGTTGCCATAATTTTACAGCCACCTAAGCATTCTTTTGAAACTTTGATGCACAGATTAGCAGAATATGGGCAGAGCCAACCTTTAAGTTTGTAAGCAACCTGTCCATCAACATGGTTTTTTGTTTATCTTATAAAATAGCAGTTATGAGTATTCTATGAAATTGCGTGACCCTTTCTTATGCTTATTTGGAATTATTTTCTTGTTTTTTCAAATTTGGCTTGTTTTTTCTTTTCCCTTTTTTCTCCAAATTCTCTGTATGTATTTGGAATTGAAACGAGGAGCTTTGTTGATAGTTTATTGCT

mRNA sequence

GGATAGTTAACAAACGTCCTCATCTTTTCACAACTTTTGGTCATCCATCCGAATTAGATAAAAAGATGTGCGTGTTCTTTTAAAAGAAAAACGAAATTAGCTTTTGTTAACACACGTGCAGCCCCCACACCAAAGACCAAACACCCATTCTCTCACATCTTCTGTCTCTGCCTGCAACCACACCAAGAAACCACCGTCCGCCGGCAGCCTCTAGTCGTCAGACTTCACGCGCGCCAGTTGGAGAGTCGGCGGAGACCGCGCCGTCCGTGGGTAGGTTCCGACTATCTCCATTTCTCTCTCTAACCCAGATCTGTGTAGCCAGCCGCCGCCGCCATCGCCATTGTTCTAGTTTTGGCTAAGACTTAGGATGTTTTCTCGGCTTAAGCTTAATCCACCACTGGATGGATGCTTAATACTTGTCACCCATGGTGTTTAGTTTTAGATCTGAGTTTTGGACAACCGTGCAAGAGCGTTTAGACCGTTCTGGTAAGTAGTAAGGCTTTGAGATGGCTGGATTCATTGTAGTTTTCAGGAGTTCTGGGTTTTGATCTTAGGTTTTGAATATTTGTAGGATCGAATTTACTGCTCGGGGATTTTGAATTAGCGTTGGTCTTAGTCACACCTGGAGACCTTTAAACACGAGTTTTATACTGTTGTTTAAGCCAATAGTTTGGAATTTAAGCTGGTATTTGGTGTGTGATAGAGGTTAATCCAGGATTCTTGCTCTACATCAGAAGGGATATTATTTTCTTGTTACTGGGCTTTTAACATTGAGGTAAGTGGGCTCACTTCTGAAACGAAGCTAGGTTGGGATCTGTGTGCTGATAGGATAAACTTTGTGTGAATTTTAATATGATATCTGGTTGATGTATGTTAGATGTGTACGTATGATGAAATGATCGATGTTACAAAGGCTCCGGCATCATGAAGACTCCTTCAAGTTTAAGGTTGATGTTTTCTTTATGTTTTGTGGGCAGTTGATCGAATTCATATGTTGTTGATGGATGGTAGAAGATGGTGGCTTGGTTGTTTAGCAGGCTTAAACTCTTTGGTTTCTCATGTAAAAACCAGACAGGCTTGAGTTTAAATTACCTGCAAGGTCGTTGTCTAGTAAACATAAAACTAAAATGGGTGAAAGATAAAGACTTAGATACTGTAGTGAGTGCTGAGAAAGACCTTAAGGCTGTTTGCTTTCTTGTGTCTATAATCTCTTCAAGTCCTGAAAATTGCTTACCGGTCTACCATCTGCGCTGCCATCGTCGGCAGCTTGGTCTTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATACCCTTCCATCTTTCACGAGTCACATATTCTCGATAGTGCAGGCACTCGTGTGCCATCATTTTGCTTAACTCCAGAAGCTAGGGAACTTCACGAGGAGCAAATCGTTGTCCTTCGTCAGTGTTGGACAGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACTAGTGGTTGCACACTTCCTCTACAGACAATTGACCAGTTAAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCGTTCCATATAACCATGACTTATTTTCGTTCATCCGGCTCCAAGATGATCGCATTGGGCTGAAACTTCTGTTGTGGGATAATGACCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAAATGGAAGAAGATATAAGAAATGGCTATTTGGCCTTTCCAATTGGATTTACAAGGGGTTTTGGACTGAATAGAAAATGCATGGATTGGTTAAAAGATTGGCAGAAGCTCCCTTACACTTCTCCATATTGTGATGCCTCTCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACTGAACGAAAGAACGTAAGCAACCTTCGAAAACCGTTCTCTTTGCCTCAGAAGTTCACAAAAGTGTTCGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGGATGATACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGATAAGCTTCTACAGAAACATCCTCTTGTTAGTATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGCAGAGGTTTGTACAAAAAAGATCCATCTGGTCACTTTTATCATGATGAAGTGAATGAAACTCGATATAGTTCTGAAGAAGTGTCCGACCATAACATGCTTTCGGAATATGATTCGGAATCAGATGGTCCGATTGACAACAACTGCTAAAGAAGTTGCCATAATTTTACAGCCACCTAAGCATTCTTTTGAAACTTTGATGCACAGATTAGCAGAATATGGGCAGAGCCAACCTTTAAGTTTGTAAGCAACCTGTCCATCAACATGGTTTTTTGTTTATCTTATAAAATAGCAGTTATGAGTATTCTATGAAATTGCGTGACCCTTTCTTATGCTTATTTGGAATTATTTTCTTGTTTTTTCAAATTTGGCTTGTTTTTTCTTTTCCCTTTTTTCTCCAAATTCTCTGTATGTATTTGGAATTGAAACGAGGAGCTTTGTTGATAGTTTATTGCT

Coding sequence (CDS)

ATGGTGGCTTGGTTGTTTAGCAGGCTTAAACTCTTTGGTTTCTCATGTAAAAACCAGACAGGCTTGAGTTTAAATTACCTGCAAGGTCGTTGTCTAGTAAACATAAAACTAAAATGGGTGAAAGATAAAGACTTAGATACTGTAGTGAGTGCTGAGAAAGACCTTAAGGCTGTTTGCTTTCTTGTGTCTATAATCTCTTCAAGTCCTGAAAATTGCTTACCGGTCTACCATCTGCGCTGCCATCGTCGGCAGCTTGGTCTTCCAAATGATGTCAAGATGTCTACCTTCATTAGGAGATACCCTTCCATCTTTCACGAGTCACATATTCTCGATAGTGCAGGCACTCGTGTGCCATCATTTTGCTTAACTCCAGAAGCTAGGGAACTTCACGAGGAGCAAATCGTTGTCCTTCGTCAGTGTTGGACAGATCTTCGATCTAGGCTTTGCAGATTGCTAATGCTTACTAGTGGTTGCACACTTCCTCTACAGACAATTGACCAGTTAAGATGGGACATGGGGCTGCCATATGATTATCAGAACTCTTTCGTTCCATATAACCATGACTTATTTTCGTTCATCCGGCTCCAAGATGATCGCATTGGGCTGAAACTTCTGTTGTGGGATAATGACCTTGCTGTTTCTGAACTGCAGAAGAATGCTGCTTCCCAACAAATGGAAGAAGATATAAGAAATGGCTATTTGGCCTTTCCAATTGGATTTACAAGGGGTTTTGGACTGAATAGAAAATGCATGGATTGGTTAAAAGATTGGCAGAAGCTCCCTTACACTTCTCCATATTGTGATGCCTCTCATTTGGATCCCCGTACTGATGTATCTGAAAAGAGGATTGTCGGAGTCTTTCATGAGCTTCTTCACCTTACCTTGCAAAAGAAAACTGAACGAAAGAACGTAAGCAACCTTCGAAAACCGTTCTCTTTGCCTCAGAAGTTCACAAAAGTGTTCGAGCGTCATCCTGGTATCTTTTACATCTCTAAGAAGGATGATACGCAGACTGTAATCCTTCGAGAAGCATATGATGGTGATAAGCTTCTACAGAAACATCCTCTTGTTAGTATCAGGGAAAGATTTACAAGCATGTTGAGGAAAGGCCAACTAGATAGAAGCAGAGGTTTGTACAAAAAAGATCCATCTGGTCACTTTTATCATGATGAAGTGAATGAAACTCGATATAGTTCTGAAGAAGTGTCCGACCATAACATGCTTTCGGAATATGATTCGGAATCAGATGGTCCGATTGACAACAACTGCTAA

Protein sequence

MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPIDNNC

Homology

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BLAST of Cmc03g0070581.1 vs. NCBI nr
Match: XP_008445613.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008445614.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008445616.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >KAA0047207.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK01316.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 869.4 bits (2245), Expect = 1.3e-248
Identity = 421/423 (99.53%), Postives = 421/423 (99.53%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGH YHDEVNETRYSSEEVSDHNMLSEYDSESDG ID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHVYHDEVNETRYSSEEVSDHNMLSEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

[Close]

BLAST of Cmc03g0070581.1 vs. NCBI nr
Match: XP_004138535.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Cucumis sativus] >KGN45924.1 hypothetical protein Csa_004974 [Cucumis sativus])

HSP 1 Score: 827.0 bits (2135), Expect = 7.3e-236
Identity = 400/423 (94.56%), Postives = 411/423 (97.16%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKL GF CKNQ GL+LNYLQGR LVNI+LKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPE+CLPVYHLR HRRQLG+PNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELH EQI+VLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYNHD+FSFIRLQD RIGLKLL WDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLK+WQ LPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKL+QKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGHF++DEVNET YSSEEVSDHNML EYDSESDG ID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

[Close]

BLAST of Cmc03g0070581.1 vs. NCBI nr
Match: XP_038886285.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida] >XP_038886286.1 protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 785.8 bits (2028), Expect = 1.9e-223
Identity = 384/422 (91.00%), Postives = 399/422 (94.55%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSR KL  F CK Q GL+LNYLQ R LVNIKLKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRAKLSCFPCKIQRGLNLNYLQSRYLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSS E+CLP+YHL  HRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSSEHCLPIYHLHPHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELHEE+IVVLRQC  DLRSRLCRLLMLT+GCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHEEEIVVLRQCSKDLRSRLCRLLMLTNGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYN+DLFSFIRL DDRIGLKLL WDNDLA+SELQKNAASQQM+EDIRNGYL FPIGF
Sbjct: 181 SFIPYNYDLFSFIRLPDDRIGLKLLSWDNDLAISELQKNAASQQMKEDIRNGYLPFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLK+WQKLPYTSPYCDASHLDPRTD SEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLKRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKK DTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKGDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPI 420
           ERFTSMLRKGQLDRSRGLYKK DP GHF+HDEV+ET+YSSEEVSDHN LSEYDSESDG +
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKEDPFGHFHHDEVDETQYSSEEVSDHNFLSEYDSESDGLV 420

Query: 421 DN 422
           DN
Sbjct: 421 DN 422

[Close]

BLAST of Cmc03g0070581.1 vs. NCBI nr
Match: XP_022992258.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima])

HSP 1 Score: 772.3 bits (1993), Expect = 2.1e-219
Identity = 372/424 (87.74%), Postives = 399/424 (94.10%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MV+WLFSR+K  GF C+NQ G +LN+LQ R LVNIKLKWVKDKDLD+VVSAEKDLKAVCF
Sbjct: 1   MVSWLFSRVKFCGFPCQNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSS E C+P+Y LRCHRRQLGLPNDVKMSTFIRRYPSIFHESHI DSAGT VPSF
Sbjct: 61  LVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
            LTPEARELHEE+IVV+RQCWTD+RSRLCRLLMLTSG TLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 GLTPEARELHEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYNHDLFSF++L+DDR+GLKLL W+NDLAVSELQKNA SQQ+EED+RNG LAFPIGF
Sbjct: 181 SFIPYNHDLFSFVQLRDDRVGLKLLSWENDLAVSELQKNAGSQQVEEDVRNGCLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLK+WQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPI 420
           E+F +MLRKGQLDRSRGLYKK DP GHF  DEV+ETRYSSEE+SD+N+LSEYD ESD PI
Sbjct: 361 EKFANMLRKGQLDRSRGLYKKEDPFGHFRCDEVDETRYSSEEMSDYNLLSEYDLESDDPI 420

Query: 421 DNNC 424
           DNNC
Sbjct: 421 DNNC 424

[Close]

BLAST of Cmc03g0070581.1 vs. NCBI nr
Match: XP_022929882.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata])

HSP 1 Score: 771.9 bits (1992), Expect = 2.8e-219
Identity = 370/424 (87.26%), Postives = 400/424 (94.34%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MV+WLFSR+K  GF CKNQ G +LN+LQ R LVNIKLKWVKDKDLD+VVSAEKDLKAVCF
Sbjct: 1   MVSWLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSS E C+P+Y LRCHRRQLGLPNDVKMSTFIRRYPSIFHESHI DSAGT VPSF
Sbjct: 61  LVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
            LTPEAREL+EE+IVV+RQCWTD+RSRLCRLLMLTSG TLPLQTIDQLRWDMGLPYDY+N
Sbjct: 121 GLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYNHDLFSF++L+DDR+GLKLL WD+DLAVSELQKNA SQQ+EED+RNG LAFPIGF
Sbjct: 181 SFIPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLK+WQKLPYTSPYCDASHLDPRTD SEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKK+DTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPI 420
           E+F +M RKGQLDRSRGLYKK DP GHF+HDEV+ETRYSSEE+SD+N+LSEYDSESD PI
Sbjct: 361 EKFANMSRKGQLDRSRGLYKKEDPFGHFHHDEVDETRYSSEEMSDYNLLSEYDSESDDPI 420

Query: 421 DNNC 424
           DNNC
Sbjct: 421 DNNC 424

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.0e-59
Identity = 132/351 (37.61%), Postives = 198/351 (56.41%), Query Frame = 0


Query: 25  NYLQGRCLVNIKLKWVKDKDLDTV--VSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHR 84
           N  Q R  V++ +KW +D   D +  +     LK+V  L + I   P  C+P+  +    
Sbjct: 17  NLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKT 76

Query: 85  RQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWT 144
           RQ  +    K++ F+R++PSIF E          +P F LTPEA EL  ++ VV +    
Sbjct: 77  RQFDV--STKIAHFLRKFPSIFEE---FVGPEYNLPWFRLTPEATELDRQERVVYQTSAD 136

Query: 145 DLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFVPYNHD-LFSFIRLQDDRIG 204
           DLR RL +L++++    LPL  +  ++W +GLP DY   F   N D  F F+ ++D   G
Sbjct: 137 DLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-QFPDMNLDSSFRFVDMEDGVKG 196

Query: 205 LKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMDWLKDWQKLP 264
           L +     D  +S LQKNA  ++  E +    + FP+  ++G  L  K  DWL ++QKLP
Sbjct: 197 LAVDYNGGDKVLSVLQKNAMKKRRGE-VSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLP 256

Query: 265 YTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVF 324
           Y SPY D S LDP +D++EKR+VG  HELL L ++   ERK +  L+K F LPQK  K F
Sbjct: 257 YVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAF 316

Query: 325 ERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQL 373
           ERHP IFY+S K+ T T ILRE Y     ++ HP++ +R+++  +++  +L
Sbjct: 317 ERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSEL 360

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.4e-40
Identity = 113/386 (29.27%), Postives = 198/386 (51.30%), Query Frame = 0


Query: 41  KDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRY 100
           K+   DTV+  +K LK V  L +I+ + P+  + +  L   RR LGL    ++   +RR+
Sbjct: 59  KEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRF 118

Query: 101 PSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTL 160
           P +F     +   G     F LTP A  L+ +++ +  +      ++L +LLM++    +
Sbjct: 119 PGVFD----VVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRI 178

Query: 161 PLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQ-KN 220
            ++ +  L+ D+GLP +++++        F  +R+ D    L+L  WD +LAVS  +   
Sbjct: 179 LIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM-DRGPALELTHWDPELAVSAAELAE 238

Query: 221 AASQQMEEDIRNGYLAFPIGFTR-----GFGLNRKCMDWLKDWQKLPYTSPYCDASHLDP 280
             S+  E + RN  +  P+ F R     G  L R     +  ++++PY SPY D SHL  
Sbjct: 239 EESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHLRS 298

Query: 281 RTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKD 340
            +D  EK   GV HE+L LT++K+T   ++++ R+ F   Q    +  RHP +FY+S K 
Sbjct: 299 GSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSFKG 358

Query: 341 DTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNE 400
           D  +V LREAY   +L++K+ LV ++E+  +++   +  R   +   + +     + +N 
Sbjct: 359 DRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEA-----EGMNG 418

Query: 401 TRYSSEEVSDHNMLSEYDSESDGPID 421
           +  S ++VSD     EYD E +G  D
Sbjct: 419 SLQSRDQVSD----EEYDDEDEGLSD 430

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.9e-38
Identity = 110/380 (28.95%), Postives = 193/380 (50.79%), Query Frame = 0


Query: 41  KDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRY 100
           K+   D V+  +K LK V  L +I+ S+P+  + +  L   RR LGL    ++   ++R+
Sbjct: 65  KEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKRF 124

Query: 101 PSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTL 160
           P +F     +   G     F LTP A  L+ +++ +  +      ++L +LLM++    +
Sbjct: 125 PGVFE----VVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRI 184

Query: 161 PLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQ-KN 220
            ++ I  L+ D+GLP +++++        F  +++ D   GL+L  WD +LAVS  +   
Sbjct: 185 LIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQM-DRGPGLELTHWDPELAVSAAEVAE 244

Query: 221 AASQQMEEDIRNGYLAFPIGFTR-----GFGLNRKCMDWLKDWQKLPYTSPYCDASHLDP 280
             ++  EE  RN  +  P+ F R     G  L+R     +  ++++PY SPY D SHL  
Sbjct: 245 EENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRS 304

Query: 281 RTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKD 340
            +   EK   GV HE+L LTL+K+T   ++++ R+ F   Q    +  RHP +FY+S K 
Sbjct: 305 GSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKG 364

Query: 341 DTQTVILREAYDGDKLLQKHPLVSIRERFTSML------RKG------QLDRSRGLYKKD 400
           D  +V LREAY   +L++K  LV ++E+  +++      R+G      + DR+ G  +  
Sbjct: 365 DRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRTNGAAQML 424

Query: 401 PSGHFYHDEVNETRYSSEEV 403
             G    D+ +E     E++
Sbjct: 425 SEGSDVEDDEDEGLSDMEDL 439

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.1e-36
Identity = 111/396 (28.03%), Postives = 187/396 (47.22%), Query Frame = 0


Query: 33  VNIKLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHRRQLGLPNDVK 92
           V   +K  K+   D+VV  +K LK V  +  I+ S P+  + +  L  +RR LGL    +
Sbjct: 72  VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRR 131

Query: 93  MSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWTDLRSRLCRLL 152
               +R+YP +F     +   G     F +T EA  L+ +++ +  +    L  +L +L+
Sbjct: 132 FIALLRKYPGVFE----IVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLV 191

Query: 153 MLTSGCTLPLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLA 212
           M++    + L+ I  L+ D+GLP +++++        F  +        L+L  WD +LA
Sbjct: 192 MMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGP-ALELTHWDPELA 251

Query: 213 VSELQ-KNAASQQMEEDIRNGYLAFPIGFT-----RGFGLNRKCMDWLKDWQKLPYTSPY 272
           VS  +     ++  E + RN  +  P  F      RG  L++     +  ++ + Y SPY
Sbjct: 252 VSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPY 311

Query: 273 CDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPG 332
            D SHL   T   EK   GV HELL LT +K+T   ++++ R+ F   Q+   +  RHP 
Sbjct: 312 KDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPD 371

Query: 333 IFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQLDRSRGLYKKDPSGH 392
           +FY+S K +  +V LREAY   +L+ K PL  ++E+  +++   +  R  G  K +    
Sbjct: 372 LFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGRE 431

Query: 393 FYHDEVNETRYSSEEVSDHNMLSEYDSESDGPIDNN 423
              D  +      EE SD    S+ D   +G    N
Sbjct: 432 VEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGN 462

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.0e-27
Identity = 97/357 (27.17%), Postives = 175/357 (49.02%), Query Frame = 0


Query: 40  VKDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHRRQLGLP-NDVKMSTFIR 99
           V+D   D  +  EK ++ V    S+I S P + + +  L    R+LGL     +   F+ 
Sbjct: 47  VRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLL 106

Query: 100 RYPSIFHESHILDSAGTRVPSFCLTPEA-RELHEEQIVVLRQCWTDLRSRLCRLLMLTSG 159
           ++P +F    I +    R+    LT +A  ++  E   VL Q   D  +RL +L+M+++ 
Sbjct: 107 KFPHVF---EIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQI-PDAVTRLRKLVMMSNT 166

Query: 160 CTLPLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQDDRIG-LKLLLWDNDLAVSEL 219
             + L+ +   R + GLP D++ S +  +   F  I  ++ R   ++++  D +L++  +
Sbjct: 167 GRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAI 226

Query: 220 QKNAASQQMEE--DIRNGYLAFPIGFTRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDP 279
           ++    +   +  D  +   +F + F  GF + +     +  WQ+LPY SPY D S  D 
Sbjct: 227 ERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDL 286

Query: 280 RT----DVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFERHPGIFYI 339
           R+    +  EKR V   HELL LT++KK   + +++ R   +LP+K  +   +H GIFYI
Sbjct: 287 RSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYI 346

Query: 340 SKKDD---TQTVILREAYDGDKLLQKHPLVSIRERFTSML----RKGQLDRSRGLYK 381
           S + +     TV LRE Y   +L++ + +   R R   ++    RK ++D     Y+
Sbjct: 347 STRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAKVDAELVRYR 399

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy TrEMBL
Match: A0A1S3BDZ6 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103488582 PE=4 SV=1)

HSP 1 Score: 869.4 bits (2245), Expect = 6.2e-249
Identity = 421/423 (99.53%), Postives = 421/423 (99.53%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGH YHDEVNETRYSSEEVSDHNMLSEYDSESDG ID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHVYHDEVNETRYSSEEVSDHNMLSEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy TrEMBL
Match: A0A5A7TZ49 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69G00020 PE=4 SV=1)

HSP 1 Score: 869.4 bits (2245), Expect = 6.2e-249
Identity = 421/423 (99.53%), Postives = 421/423 (99.53%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGH YHDEVNETRYSSEEVSDHNMLSEYDSESDG ID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHVYHDEVNETRYSSEEVSDHNMLSEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy TrEMBL
Match: A0A0A0KAR1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G022360 PE=4 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 3.5e-236
Identity = 400/423 (94.56%), Postives = 411/423 (97.16%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MVAWLFSRLKL GF CKNQ GL+LNYLQGR LVNI+LKWVKDKDLDTVVSAEKDLKAVCF
Sbjct: 1   MVAWLFSRLKLSGFLCKNQRGLNLNYLQGRYLVNIRLKWVKDKDLDTVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSSPE+CLPVYHLR HRRQLG+PNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF
Sbjct: 61  LVSIISSSPEHCLPVYHLRRHRRQLGIPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
           CLTPEARELH EQI+VLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 CLTPEARELHAEQIIVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYNHD+FSFIRLQD RIGLKLL WDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF
Sbjct: 181 SFIPYNHDMFSFIRLQDHRIGLKLLKWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGLNRKCMDWLK+WQ LPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLNRKCMDWLKEWQTLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKL+QKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLVQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPID 420
           ERFTSMLRKGQLDRSRGLYKKDPSGHF++DEVNET YSSEEVSDHNML EYDSESDG ID
Sbjct: 361 ERFTSMLRKGQLDRSRGLYKKDPSGHFHNDEVNETLYSSEEVSDHNMLLEYDSESDGLID 420

Query: 421 NNC 424
           NNC
Sbjct: 421 NNC 423

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy TrEMBL
Match: A0A6J1JYP5 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488632 PE=4 SV=1)

HSP 1 Score: 772.3 bits (1993), Expect = 1.0e-219
Identity = 372/424 (87.74%), Postives = 399/424 (94.10%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MV+WLFSR+K  GF C+NQ G +LN+LQ R LVNIKLKWVKDKDLD+VVSAEKDLKAVCF
Sbjct: 1   MVSWLFSRVKFCGFPCQNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSS E C+P+Y LRCHRRQLGLPNDVKMSTFIRRYPSIFHESHI DSAGT VPSF
Sbjct: 61  LVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
            LTPEARELHEE+IVV+RQCWTD+RSRLCRLLMLTSG TLPLQTIDQLRWDMGLPYDYQN
Sbjct: 121 GLTPEARELHEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYQN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYNHDLFSF++L+DDR+GLKLL W+NDLAVSELQKNA SQQ+EED+RNG LAFPIGF
Sbjct: 181 SFIPYNHDLFSFVQLRDDRVGLKLLSWENDLAVSELQKNAGSQQVEEDVRNGCLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLK+WQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPI 420
           E+F +MLRKGQLDRSRGLYKK DP GHF  DEV+ETRYSSEE+SD+N+LSEYD ESD PI
Sbjct: 361 EKFANMLRKGQLDRSRGLYKKEDPFGHFRCDEVDETRYSSEEMSDYNLLSEYDLESDDPI 420

Query: 421 DNNC 424
           DNNC
Sbjct: 421 DNNC 424

[Close]

BLAST of Cmc03g0070581.1 vs. ExPASy TrEMBL
Match: A0A6J1ENW4 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111436357 PE=4 SV=1)

HSP 1 Score: 771.9 bits (1992), Expect = 1.3e-219
Identity = 370/424 (87.26%), Postives = 400/424 (94.34%), Query Frame = 0


Query: 1   MVAWLFSRLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCF 60
           MV+WLFSR+K  GF CKNQ G +LN+LQ R LVNIKLKWVKDKDLD+VVSAEKDLKAVCF
Sbjct: 1   MVSWLFSRVKFCGFPCKNQRGSNLNHLQSRYLVNIKLKWVKDKDLDSVVSAEKDLKAVCF 60

Query: 61  LVSIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSF 120
           LVSIISSS E C+P+Y LRCHRRQLGLPNDVKMSTFIRRYPSIFHESHI DSAGT VPSF
Sbjct: 61  LVSIISSSLEQCVPIYRLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHIRDSAGTPVPSF 120

Query: 121 CLTPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQN 180
            LTPEAREL+EE+IVV+RQCWTD+RSRLCRLLMLTSG TLPLQTIDQLRWDMGLPYDY+N
Sbjct: 121 GLTPEARELYEEEIVVVRQCWTDIRSRLCRLLMLTSGTTLPLQTIDQLRWDMGLPYDYRN 180

Query: 181 SFVPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGF 240
           SF+PYNHDLFSF++L+DDR+GLKLL WD+DLAVSELQKNA SQQ+EED+RNG LAFPIGF
Sbjct: 181 SFIPYNHDLFSFVQLRDDRVGLKLLSWDDDLAVSELQKNAGSQQVEEDVRNGCLAFPIGF 240

Query: 241 TRGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTE 300
           TRGFGL RKCMDWLK+WQKLPYTSPYCDASHLDPRTD SEKRIVGVFHELLHLTLQKKTE
Sbjct: 241 TRGFGLRRKCMDWLKEWQKLPYTSPYCDASHLDPRTDASEKRIVGVFHELLHLTLQKKTE 300

Query: 301 RKNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIR 360
           RKNVSNLRKPFS+PQKFTKVFERHPGIFYISKK+DTQTVILREAYDGDKLLQKHPLVSIR
Sbjct: 301 RKNVSNLRKPFSMPQKFTKVFERHPGIFYISKKNDTQTVILREAYDGDKLLQKHPLVSIR 360

Query: 361 ERFTSMLRKGQLDRSRGLYKK-DPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESDGPI 420
           E+F +M RKGQLDRSRGLYKK DP GHF+HDEV+ETRYSSEE+SD+N+LSEYDSESD PI
Sbjct: 361 EKFANMSRKGQLDRSRGLYKKEDPFGHFHHDEVDETRYSSEEMSDYNLLSEYDSESDDPI 420

Query: 421 DNNC 424
           DNNC
Sbjct: 421 DNNC 424

[Close]

BLAST of Cmc03g0070581.1 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 459.1 bits (1180), Expect = 3.7e-129
Identity = 241/417 (57.79%), Postives = 300/417 (71.94%), Query Frame = 0


Query: 4   WLFS-RLKLFGFSCKNQTGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCFLV 63
           WL   R+ L    CK +      Y Q   LVN+KLKWVKD++LD VV  EK L+AVC LV
Sbjct: 3   WLLQRRVSLSTSLCKCRERFDFFYQQRCGLVNVKLKWVKDRELDAVVVREKHLRAVCNLV 62

Query: 64  SIISSSPENCLPVYHLRCHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCL 123
           S+IS+SP+  LP++ L  HR QLGLP ++K+S FIRRYP+IF E    DSAGT VP F L
Sbjct: 63  SVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGL 122

Query: 124 TPEARELHEEQIVVLRQCWTDLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSF 183
           T E  +L+ E++ V R    D+  RLC+LLMLT   TL L +ID LRWD+GLPYDY++S 
Sbjct: 123 TRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSL 182

Query: 184 VPYNHDLFSFIRLQDDRIGLKLLLWDNDLAVSELQKNAASQQMEEDIRNG-YLAFPIGFT 243
           +  + DLFS ++L  D  GLKL+ WD  LAVS++       Q+ ED+ N   +AFP+ FT
Sbjct: 183 ITKHPDLFSLVKLSSDLDGLKLIHWDEHLAVSQM-------QLREDVGNDERMAFPVKFT 242

Query: 244 RGFGLNRKCMDWLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTER 303
           RGFGL RK ++WL++WQ+LPYTSPY DASHLDPRTD+SEKR VGVFHELLHLT+ KKTER
Sbjct: 243 RGFGLKRKSIEWLQEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTER 302

Query: 304 KNVSNLRKPFSLPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRE 363
           KNVSNLRKPF+LPQKFTKVFERHPGIFYIS K DTQTVILREAYD   L++KHPLV +RE
Sbjct: 303 KNVSNLRKPFALPQKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVRE 362

Query: 364 RFTSMLRKGQLDRSRGLYKKDPSGHFYHDEVNETRY----SSEEVSDHNMLSEYDSE 415
           +F +M+ +G LDRSRGLY+K        + + +T Y      EE  D+N++S YDS+
Sbjct: 363 KFANMMNEGFLDRSRGLYQKSVEADLEKNNI-KTSYPVWSDEEEELDNNLISGYDSD 411

[Close]

BLAST of Cmc03g0070581.1 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 261.9 bits (668), Expect = 8.7e-70
Identity = 149/396 (37.63%), Postives = 229/396 (57.83%), Query Frame = 0


Query: 32  LVNIKLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHRRQLGLPNDV 91
           +  ++LKWVK+K+LD V+  E DLKA C L   I  SP   L    +   ++ LGL   V
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGFLTAKSVADWQKLLGL--TV 87

Query: 92  KMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWTDLRSRLCRL 151
            +  F+RRYP++FHE     +    +P F LT  A  L  ++ ++ +    D   RLCR+
Sbjct: 88  PVLRFLRRYPTLFHE--FPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRV 147

Query: 152 LMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQDDRIGLKLLLWDNDL 211
           LM+    T+ L+++  L++D+GLP +Y+ + V    D F F++  +    LKL+ W ++ 
Sbjct: 148 LMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 207

Query: 212 AVSELQKN------AASQQMEEDIRNGY--LAFPIGFTRGFGLNRKCMDWLKDWQKLPYT 271
           A S LQK       +  +    + + G   L FP+ F RG+G  +K   W+ ++QKLPY 
Sbjct: 208 AFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYI 267

Query: 272 SPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFER 331
           SPY D S++DP +D+ EKR V V HELL LT+ KKT+R  + ++R   ++P KFT++F R
Sbjct: 268 SPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTR 327

Query: 332 HPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQLDRSRGL---YK 391
           +PGIFY+S K  T TVIL+E Y   KL+  HPL  +R++F  ++R G L R+RGL    K
Sbjct: 328 YPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVSK 387

Query: 392 KDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESD 417
           ++       D++ E     EE+ + + L E DSE++
Sbjct: 388 EELLLDRPEDDLEEEGSEEEEIVEGSELEE-DSEAE 418

[Close]

BLAST of Cmc03g0070581.1 vs. TAIR 10
Match: AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 249.2 bits (635), Expect = 5.9e-66
Identity = 143/396 (36.11%), Postives = 222/396 (56.06%), Query Frame = 0


Query: 32  LVNIKLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHRRQLGLPNDV 91
           +  ++LKWVK+K+LD V+  E DLKA C L   I  SP       +  C+          
Sbjct: 28  MTKVRLKWVKNKNLDHVIDTETDLKAACILKDAIKRSPTGITIRENFNCY---------- 87

Query: 92  KMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWTDLRSRLCRL 151
               + +RYP++FHE     +    +P F LT  A  L  ++ ++ +    D   RLCR+
Sbjct: 88  ----WNKRYPTLFHE--FPHARYASLPCFKLTDTALMLDSQEEIIHQSHEADTVERLCRV 147

Query: 152 LMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQDDRIGLKLLLWDNDL 211
           LM+    T+ L+++  L++D+GLP +Y+ + V    D F F++  +    LKL+ W ++ 
Sbjct: 148 LMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKASNGNPCLKLVKWRDEF 207

Query: 212 AVSELQKN------AASQQMEEDIRNGY--LAFPIGFTRGFGLNRKCMDWLKDWQKLPYT 271
           A S LQK       +  +    + + G   L FP+ F RG+G  +K   W+ ++QKLPY 
Sbjct: 208 AFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQKKVKAWMDEFQKLPYI 267

Query: 272 SPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVFER 331
           SPY D S++DP +D+ EKR V V HELL LT+ KKT+R  + ++R   ++P KFT++F R
Sbjct: 268 SPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSMRAELNIPHKFTRLFTR 327

Query: 332 HPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQLDRSRGL---YK 391
           +PGIFY+S K  T TVIL+E Y   KL+  HPL  +R++F  ++R G L R+RGL    K
Sbjct: 328 YPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVMRTGFLYRARGLGMVSK 387

Query: 392 KDPSGHFYHDEVNETRYSSEEVSDHNMLSEYDSESD 417
           ++       D++ E     EE+ + + L E DSE++
Sbjct: 388 EELLLDRPEDDLEEEGSEEEEIVEGSELEE-DSEAE 406

[Close]

BLAST of Cmc03g0070581.1 vs. TAIR 10
Match: AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-60
Identity = 132/351 (37.61%), Postives = 198/351 (56.41%), Query Frame = 0


Query: 25  NYLQGRCLVNIKLKWVKDKDLDTV--VSAEKDLKAVCFLVSIISSSPENCLPVYHLRCHR 84
           N  Q R  V++ +KW +D   D +  +     LK+V  L + I   P  C+P+  +    
Sbjct: 17  NLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKT 76

Query: 85  RQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELHEEQIVVLRQCWT 144
           RQ  +    K++ F+R++PSIF E          +P F LTPEA EL  ++ VV +    
Sbjct: 77  RQFDV--STKIAHFLRKFPSIFEE---FVGPEYNLPWFRLTPEATELDRQERVVYQTSAD 136

Query: 145 DLRSRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFVPYNHD-LFSFIRLQDDRIG 204
           DLR RL +L++++    LPL  +  ++W +GLP DY   F   N D  F F+ ++D   G
Sbjct: 137 DLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYL-QFPDMNLDSSFRFVDMEDGVKG 196

Query: 205 LKLLLWDNDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMDWLKDWQKLP 264
           L +     D  +S LQKNA  ++  E +    + FP+  ++G  L  K  DWL ++QKLP
Sbjct: 197 LAVDYNGGDKVLSVLQKNAMKKRRGE-VSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLP 256

Query: 265 YTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFSLPQKFTKVF 324
           Y SPY D S LDP +D++EKR+VG  HELL L ++   ERK +  L+K F LPQK  K F
Sbjct: 257 YVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAF 316

Query: 325 ERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQL 373
           ERHP IFY+S K+ T T ILRE Y     ++ HP++ +R+++  +++  +L
Sbjct: 317 ERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSEL 360

[Close]

BLAST of Cmc03g0070581.1 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 212.6 bits (540), Expect = 6.1e-55
Identity = 133/364 (36.54%), Postives = 192/364 (52.75%), Query Frame = 0


Query: 20  TGLSLNYLQGRCLVNIKLKWVKDKDLDTVVSAEKDLKAVCFLVSIISSSPENCLPVYHLR 79
           T L+    Q R  VN ++KWV D  LD  V  EK+LK V  L   I SSP   LP+  L 
Sbjct: 6   TKLARALQQRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLS 65

Query: 80  CHRRQLGLPNDVKMSTFIRRYPSIFHESHILDSAGTRVPSFCLTPEARELH-EEQIVVLR 139
             +  + L   +  + F ++YPS+F       S    V    LTP+A  LH EE+ + L 
Sbjct: 66  LLKPLVNL--HITAAAFFQKYPSVFTTFQPSPSHPLHVR---LTPQALTLHKEEETIHLS 125

Query: 140 QCWTDLR-SRLCRLLMLTSGCTLPLQTIDQLRWDMGLPYDYQNSFVPYNHDLFSFIRLQD 199
               ++   RL + LMLT   +LPL  +D+ R+D+GLP DY  S +    + F    ++D
Sbjct: 126 PPQRNVTVQRLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKD 185

Query: 200 DRIGLKLLLWD-----NDLAVSELQKNAASQQMEEDIRNGYLAFPIGFTRGFGLNRKCMD 259
              G K L        N+L VSE+++  A+       +   + + + F +G+ L+++  +
Sbjct: 186 RLTGEKTLALTISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMNFPKGYELHKRVKN 245

Query: 260 WLKDWQKLPYTSPYCDASHLDPRTDVSEKRIVGVFHELLHLTLQKKTERKNVSNLRKPFS 319
           W++ WQ LPY SPY +A HL   +D +EK  V V HELL L + KKTE  NV  L +   
Sbjct: 246 WVEQWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLG 305

Query: 320 LPQKFTKVFERHPGIFYISKKDDTQTVILREAYDGDKLLQKHPLVSIRERFTSMLRKGQL 377
              +F K    HPGIFY+S K  TQTV+LREAY    LL+KHPL+ IR ++  ++ K   
Sbjct: 306 FGMRFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGR 364

The following BLAST results are available for this feature:

BLAST of Cmc03g0070581.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445613.1	1.3e-248	99.53	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_008445614.1 PR...	[more]
XP_004138535.1	7.3e-236	94.56	protein WHAT'S THIS FACTOR 9, mitochondrial [Cucumis sativus] >KGN45924.1 hypoth...	[more]
XP_038886285.1	1.9e-223	91.00	protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida] >XP_038886286.1 ...	[more]
XP_022992258.1	2.1e-219	87.74	protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima]	[more]
XP_022929882.1	2.8e-219	87.26	protein WHAT'S THIS FACTOR 1 [Cucurbita moschata]	[more]

BLAST of Cmc03g0070581.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	3.0e-59	37.61	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
B6TTV8	5.4e-40	29.27	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q65XL5	3.9e-38	28.95	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
A0MFS5	2.1e-36	28.03	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q689D6	4.0e-27	27.17	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of Cmc03g0070581.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDZ6	6.2e-249	99.53	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103488582 PE=4...	[more]
A0A5A7TZ49	6.2e-249	99.53	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0KAR1	3.5e-236	94.56	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G022360 PE=4 S...	[more]
A0A6J1JYP5	1.0e-219	87.74	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488632...	[more]
A0A6J1ENW4	1.3e-219	87.26	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111436357 PE=4 ...	[more]

BLAST of Cmc03g0070581.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48040.1	3.7e-129	57.79	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	8.7e-70	37.63	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.2	5.9e-66	36.11	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT2G39120.1	2.2e-60	37.61	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	6.1e-55	36.54	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 40..371 e-value: 4.0E-117 score: 390.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..411
None	No IPR available	PANTHER	PTHR31476:SF6	EMB\|CAB68190.1	coord: 4..416
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 4..416

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc03g0070581	Cmc03g0070581	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc03g0070581.1-exon	Cmc03g0070581.1-exon-CMiso1.1chr03:16448813..16451404	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc03g0070581.1-three_prime_utr	Cmc03g0070581.1-three_prime_utr-CMiso1.1chr03:16448813..16449118	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc03g0070581.1-cds	Cmc03g0070581.1-cds-CMiso1.1chr03:16449119..16450390	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc03g0070581.1-five_prime_utr	Cmc03g0070581.1-five_prime_utr-CMiso1.1chr03:16450391..16451404	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc03g0070581.1	Cmc03g0070581.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016787	hydrolase activity