Cmc03g0063221.1 (mRNA) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGTGTTTTTTACTATTGTTAGAGAAAGAAAGGAGATTTTTTTATACAAACCCATTAAAGAATTTGCCATAAGTCCAAATGGGTTGGAGTTGATTTGGTAAGAATATGAAAAAAAAAATTATTTGAAAATTACCACAAAATCAAAAATCTTTTAGATCTGCCACTGTTTATAATAGGTCAATATGGGAATGGGATCTCATTAGTTTCAACAAATTACTTGAGTTCTTTGTTTCAATATTTTTTTTCTTGGCTCAAAATTAATCATTCAAATTTGATGGGTAATGGATTGAAATGAGGACAATCTTTAATTGATGAGATCGTGGAGTCTTAGCTTTATCAAAGAGGGGAAAAACAGAAACTTCAAACTGAAATGACAGGCATATACGGCCAAATATGATTTTCGTTTTGACAAATTAAAGGCTATTGGACATCACACCAATCACCATCAAGATTTGAAGATCACACACACACACAACAACAACAACATCAACAACACCACCAACAACACATTATTATTAGTGCAATCAACAGTATCTCTCCAGATGCAACCATAAAAACCAAACTTTTGAGTTTGATTTCACAAGACTGGCCCCTGCCTCCTCTTTTGCATCAGTTATGGAAGATAATAACTGGGATCGTTCTACTAAGCCCGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCATGAAGCTTCTCTTCTTCATCCATGGATGATTAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCGTCATTTTCAAGTCCATCAGAAGGAATCATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGGGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGGTACTCCTCTCTCTCTCTCTCTCTCTTCCTCTCTCTAGCCTTGTCTCTTTCTAATGGGATGACCTGAAACACCGAAACATAGCAAAACGTATCTACTTTTTCATTCTCCTAGTAGATAACAGATCCCATGTCAACAGATAGATTATATCAAGCAGATTATAACCCTTTCATTTTTCAAAATACGCTAAGTCTCACGTTTTTGTGATTATTAGAGTAATCGGCATAGAGCAATACAAGTTCATGGACTTTAGTCAAAGAGGACTTGTAAAATTGCATAGTTGTTACTCTGTGAAGAAATATAAACCATTAAAGAGACACTCTGCAGCACACGCTTAGATCCATCTTCTTGTTTCCTATGGCAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATAGATCAAGTGAAAGACCTGAAACGAAAAGCGATGGAAGCCAGTAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATAGACTCCACCATGGTTGAAGACAATAGCAGCAATAACATTGCGATAAAGGTATCGGTGAGTTGTGACGATCGGCCAGAACTGCTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAGTTAGTTTTAAGTCGAATGTCATCATCATCAACTGCCTCGACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCATAGTAGTTTCTCTTCTTCAATTATTTAACTACGAATAGAGCTATCGATCGAAAACGAAGCTTCAATCCAATTACAATGGATTGACAAAAAGATAAGTGATAAAGCCGAAGCCTCTTGAAGGAAGAATGAGTAGAGAAATTGAAGCTGTATTAAAATTCCAAGTTGGAAAACAAAACTAGATAGGTAAAATCCATCAAAAGATTCGTTAAGTGTAGTATTGGAAAGACAGAATAGAAAATGGACGAGTCAAAGAACACCAATATATCTCATTATGTTAGTTTTCCCTTCACACAACATATAGCAACTTAAGACCATGGCATACTTAATCTTGTTCAAATCCAGAACCTTGCATTGACTGAAGAGGTGAACATAAATGATCAGTGAAGAAAAAATTCATAGTATTCAATTATTTCCTTTGTTCTTATATTTTAAATAGCGATTATACCACATTGAAGTTCATAATTAAAC CTTGTGTTTTTTACTATTGTTAGAGAAAGAAAGGAGATTTTTTTATACAAACCCATTAAAGAATTTGCCATAAGTCCAAATGGGTTGGAGTTGATTTGGTAAGAATATGAAAAAAAAAATTATTTGAAAATTACCACAAAATCAAAAATCTTTTAGATCTGCCACTGTTTATAATAGGTCAATATGGGAATGGGATCTCATTAGTTTCAACAAATTACTTGAGTTCTTTGTTTCAATATTTTTTTTCTTGGCTCAAAATTAATCATTCAAATTTGATGGGTAATGGATTGAAATGAGGACAATCTTTAATTGATGAGATCGTGGAGTCTTAGCTTTATCAAAGAGGGGAAAAACAGAAACTTCAAACTGAAATGACAGGCATATACGGCCAAATATGATTTTCGTTTTGACAAATTAAAGGCTATTGGACATCACACCAATCACCATCAAGATTTGAAGATCACACACACACACAACAACAACAACATCAACAACACCACCAACAACACATTATTATTAGTGCAATCAACAGTATCTCTCCAGATGCAACCATAAAAACCAAACTTTTGAGTTTGATTTCACAAGACTGGCCCCTGCCTCCTCTTTTGCATCAGTTATGGAAGATAATAACTGGGATCGTTCTACTAAGCCCGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCATGAAGCTTCTCTTCTTCATCCATGGATGATTAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCGTCATTTTCAAGTCCATCAGAAGGAATCATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGGGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATAGATCAAGTGAAAGACCTGAAACGAAAAGCGATGGAAGCCAGTAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATAGACTCCACCATGGTTGAAGACAATAGCAGCAATAACATTGCGATAAAGGTATCGGTGAGTTGTGACGATCGGCCAGAACTGCTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAGTTAGTTTTAAGTCGAATGTCATCATCATCAACTGCCTCGACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCATAGTAGTTTCTCTTCTTCAATTATTTAACTACGAATAGAGCTATCGATCGAAAACGAAGCTTCAATCCAATTACAATGGATTGACAAAAAGATAAGTGATAAAGCCGAAGCCTCTTGAAGGAAGAATGAGTAGAGAAATTGAAGCTGTATTAAAATTCCAAGTTGGAAAACAAAACTAGATAGGTAAAATCCATCAAAAGATTCGTTAAGTGTAGTATTGGAAAGACAGAATAGAAAATGGACGAGTCAAAGAACACCAATATATCTCATTATGTTAGTTTTCCCTTCACACAACATATAGCAACTTAAGACCATGGCATACTTAATCTTGTTCAAATCCAGAACCTTGCATTGACTGAAGAGGTGAACATAAATGATCAGTGAAGAAAAAATTCATAGTATTCAATTATTTCCTTTGTTCTTATATTTTAAATAGCGATTATACCACATTGAAGTTCATAATTAAAC ATGGAAGATAATAACTGGGATCGTTCTACTAAGCCCGAGGGGCTAAATTTTGATCACTGCAATCCCAATTCAAGCCATGAAGCTTCTCTTCTTCATCCATGGATGATTAATCCTCAGTTTTCAAGCTCAAATGAGTTCTTCCCGTCATTTTCAAGTCCATCAGAAGGAATCATTGTTGAAGATAGAGCAGCTTCTGCTTCAAAAAGCCATAGCCAAGCAGAAAAGAGACGTAGGGACAGAATCAATGCTCAGCTTGCAACTCTTAGGAAACTCATTCCCAAATCTGATAAGATGGATAAAGCAGCTTTGTTGGGAAGCGCAATAGATCAAGTGAAAGACCTGAAACGAAAAGCGATGGAAGCCAGTAAGAACATGACAGTTCCAACAGACATGGATGAAGTAACTATAGACTCCACCATGGTTGAAGACAATAGCAGCAATAACATTGCGATAAAGGTATCGGTGAGTTGTGACGATCGGCCAGAACTGCTCACAGAGCTCATCCAAGTGATCAAAGGATTGAAGCTCACAACAATAAGAGCTGATATGGCCAGTGTTGGTGGTCGCATTAAAAGCATACTTATCCTTTGCAATAAAGATGGTGAAAAAAGTGTCTGCTTAAACACTGTTCAGCAGTCTCTTAAGTTAGTTTTAAGTCGAATGTCATCATCATCAACTGCCTCGACCTATCGTATTAGAAGTAAACGACAGAGGTTCTTCCTCCCTTCGCAATATTCATAG MEDNNWDRSTKPEGLNFDHCNPNSSHEASLLHPWMINPQFSSSNEFFPSFSSPSEGIIVEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSAIDQVKDLKRKAMEASKNMTVPTDMDEVTIDSTMVEDNSSNNIAIKVSVSCDDRPELLTELIQVIKGLKLTTIRADMASVGGRIKSILILCNKDGEKSVCLNTVQQSLKLVLSRMSSSSTASTYRIRSKRQRFFLPSQYS Homology
BLAST of Cmc03g0063221.1 vs. NCBI nr
Match: XP_008441476.1 (PREDICTED: transcription factor bHLH51 [Cucumis melo] >KAA0055027.1 transcription factor bHLH51 [Cucumis melo var. makuwa]) HSP 1 Score: 462.6 bits (1189), Expect = 2.1e-126 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. NCBI nr
Match: XP_004138418.2 (transcription factor bHLH51 [Cucumis sativus] >KGN45796.1 hypothetical protein Csa_005156 [Cucumis sativus]) HSP 1 Score: 447.2 bits (1149), Expect = 9.1e-122 Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. NCBI nr
Match: XP_038885248.1 (transcription factor bHLH51 [Benincasa hispida]) HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108 Identity = 223/246 (90.65%), Postives = 230/246 (93.50%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. NCBI nr
Match: XP_022134346.1 (transcription factor bHLH51-like [Momordica charantia]) HSP 1 Score: 386.3 bits (991), Expect = 1.9e-103 Identity = 215/250 (86.00%), Postives = 226/250 (90.40%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. NCBI nr
Match: XP_022993156.1 (transcription factor bHLH51-like [Cucurbita maxima] >XP_022993157.1 transcription factor bHLH51-like [Cucurbita maxima] >XP_022993158.1 transcription factor bHLH51-like [Cucurbita maxima]) HSP 1 Score: 378.6 bits (971), Expect = 4.0e-101 Identity = 216/250 (86.40%), Postives = 223/250 (89.20%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy Swiss-Prot
Match: Q9XEF0 (Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 7.2e-37 Identity = 104/231 (45.02%), Postives = 147/231 (63.64%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy Swiss-Prot
Match: Q9S7Y1 (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 5.0e-30 Identity = 72/186 (38.71%), Postives = 123/186 (66.13%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy Swiss-Prot
Match: Q9LS08 (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.5e-26 Identity = 60/139 (43.17%), Postives = 99/139 (71.22%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy Swiss-Prot
Match: Q9LET0 (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.9e-23 Identity = 69/188 (36.70%), Postives = 119/188 (63.30%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy Swiss-Prot
Match: O80674 (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.6e-22 Identity = 68/205 (33.17%), Postives = 128/205 (62.44%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy TrEMBL
Match: A0A5A7UKD9 (Transcription factor bHLH51 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001830 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy TrEMBL
Match: A0A1S3B4A6 (transcription factor bHLH51 OS=Cucumis melo OX=3656 GN=LOC103485584 PE=4 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.0e-126 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy TrEMBL
Match: A0A0A0KDD1 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G011720 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.4e-122 Identity = 239/246 (97.15%), Postives = 242/246 (98.37%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy TrEMBL
Match: A0A6J1BXL0 (transcription factor bHLH51-like OS=Momordica charantia OX=3673 GN=LOC111006626 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 9.3e-104 Identity = 215/250 (86.00%), Postives = 226/250 (90.40%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. ExPASy TrEMBL
Match: A0A6J1K1E0 (transcription factor bHLH51-like OS=Cucurbita maxima OX=3661 GN=LOC111489256 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.9e-101 Identity = 216/250 (86.40%), Postives = 223/250 (89.20%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. TAIR 10
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 155.6 bits (392), Expect = 5.1e-38 Identity = 104/231 (45.02%), Postives = 147/231 (63.64%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. TAIR 10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 132.9 bits (333), Expect = 3.6e-31 Identity = 72/186 (38.71%), Postives = 123/186 (66.13%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. TAIR 10
Match: AT3G25710.1 (basic helix-loop-helix 32 ) HSP 1 Score: 119.0 bits (297), Expect = 5.3e-27 Identity = 60/139 (43.17%), Postives = 99/139 (71.22%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. TAIR 10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 109.4 bits (272), Expect = 4.2e-24 Identity = 69/188 (36.70%), Postives = 119/188 (63.30%), Query Frame = 0
BLAST of Cmc03g0063221.1 vs. TAIR 10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 6.1e-23 Identity = 68/205 (33.17%), Postives = 128/205 (62.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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