Cmc02g0047081.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc02g0047081.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 12750171 .. 12752153 (+)
Sequence length1983
RNA-Seq ExpressionCmc02g0047081.1
SyntenyCmc02g0047081.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAGTTAGAAATTGTTTAATTTAGGGAAGTTGATAATGTAAAGCTATAAACAACAAAAACTCCCAACTGACATAGCCTTCCGTCTAGGCGCCTCTGCGGTGACCCTATTAATAACATCATCGCCTTCACTCATTTATTATCATTTTAGAGCCCCAAAAACCATTAAATGAATAAGATCAAAATCTGTAACCCATTAAATGCATACATCACTCACACACTCCTCAACTATCTCCTTCCCCTATTCATTTTGAATTTTAAATTCCCATTACCTATTTATTACCTTCTTTTCTTGGTTTTTCTTTTTGGTTCCCTCAATTTCAATTCATCACTCTATCTCTTCATGCATCCCCACTTCAGTAATCATCAATACACAACTGCAACTAAAAATTTCTTTTCTTTAATCCATTATTTCTATTTTCTATTATTCTACATAGATCTAAAAATTTAAACACCGAAGAATTAAATATTTGAAACAGAAGATGAAGGTGGTGGTGATGGTGATGGTGGTGATGTTGATTCGAAGTGAGTAACCTTGTTTAATTTTCCTCCCATTAGCCATTGTAACGTCCTCTTCGCTAAAGATTGATTGTATTGTGATTCCAAACTGTTACGGCTCTGATTTTCTTCATCCAACTCCATAGATTCGTTTTCCCACCTGCAAACGTTCATTTCCGAGTTCATCTCAATCGGTAATCGAAACGAAACTGTTCTTCTTCTTGAAGAATCTGTGAGCGATTCCTTTGGATTTTTCCCTCTTAACCAAATCTTCGATACTGAGAAACTCTCTATTTTGTTGTTATTGCTATTGCTATTACCATTCTCCTCTGTTTTCAGAGGTTCAATCCCATTGAGTTTAAACTCTCTTCTGGATTCACAGTCGTATTCGGACATGGCTGCTCTGTAACCAGGTGTTAATGGCAGAGCTGGCTTCCTGCTTGCTTGTTTCTTCACTGGGGTGCTTCTAATCGCTACTTTTACTGAAGAATTCTCATCCATTACGTATTCAAAAGATCCCATTGAAAAGCATCTGCGAGAATCCACATTCTTGTTCTCACTACTTCCACTTTCCCCTGCATCGACATTTTTGTATTTTCCAAGCTTCACAGTCACTACAGTCGCATTTGAATCCTCTAATTTCGTAATCTCGCTCGACCCACCTTCGAATTCCCCATCTCCAACAAAACCCATTCGGGAATTTGACCCTGGAATCTGGTTTGTATGATTTGTAATCTCCCTATCTGATACGATATCTCTAGAACTCTCACTCCCAGATTCAAGAACAAGAACAATTGGTGAACAAGTAGTATGTGGGGAGAAATGATCAGGTAACAAACTAGATCTACACAAAGGGCAAGTTGAGTGAGACAACAGCCAAGTATCAATACATTCTGTATGAAAAGCATGGCTGCATTTTGGCAATAGCCTGAGTTTATCCTCCGGCTCAAACTCACAGAGACAAACAGCACAGTCAAATGGGGATTTGGATCCAATAATGGCTTTGTAATGGAAAACAGGAAGTGTATCAATGAAGGATTGGTCTACTCCAGAGTCATGGAGATGAAAGAGCTGCTGTAATTGGCCTTGAAAAGCAGTGACATTGTCAGAACTTTCAGGGTCTCTATGTAATGGGGGAGTCCATAGAAATCTAACAAGAAGATGAAGCAAACCAGAGACAAAGAAGACGATAGCGAGAATGATTATGATGAGAAGTACACTTGGACTCACCTTGTTTTCTAAGTTGAACCCACTGGATTGTGCTAAAGGAGGAGGCTGTGCAGCAAGAAAATAAGGCTGAAACTGTGGTGGTGAAGGGAAAAATCTTCCATTTACCTGAAGAAGTAGTGAATCCATGTTAATGGAGAAAAACCCAACTCGATTTGACTCGACTCAACTCAACTCATAGCACAAAAGCTCGTGGAAGTCAAAAGGGGGAGTTGGGTTTTGAGAGGGAAGAAAAACGAAATAAATGGGACAGATGGAGAG

mRNA sequence

GTAGTTAGAAATTGTTTAATTTAGGGAAGTTGATAATGTAAAGCTATAAACAACAAAAACTCCCAACTGACATAGCCTTCCGTCTAGGCGCCTCTGCGGTGACCCTATTAATAACATCATCGCCTTCACTCATTTATTATCATTTTAGAGCCCCAAAAACCATTAAATGAATAAGATCAAAATCTGTAACCCATTAAATGCATACATCACTCACACACTCCTCAACTATCTCCTTCCCCTATTCATTTTGAATTTTAAATTCCCATTACCTATTTATTACCTTCTTTTCTTGGTTTTTCTTTTTGGTTCCCTCAATTTCAATTCATCACTCTATCTCTTCATGCATCCCCACTTCAGTAATCATCAATACACAACTGCAACTAAAAATTTCTTTTCTTTAATCCATTATTTCTATTTTCTATTATTCTACATAGATCTAAAAATTTAAACACCGAAGAATTAAATATTTGAAACAGAAGATGAAGGTGGTGGTGATGGTGATGGTGGTGATGTTGATTCGAAGTGAGTAACCTTGTTTAATTTTCCTCCCATTAGCCATTGTAACGTCCTCTTCGCTAAAGATTGATTGTATTGTGATTCCAAACTGTTACGGCTCTGATTTTCTTCATCCAACTCCATAGATTCGTTTTCCCACCTGCAAACGTTCATTTCCGAGTTCATCTCAATCGGTAATCGAAACGAAACTGTTCTTCTTCTTGAAGAATCTGTGAGCGATTCCTTTGGATTTTTCCCTCTTAACCAAATCTTCGATACTGAGAAACTCTCTATTTTGTTGTTATTGCTATTGCTATTACCATTCTCCTCTGTTTTCAGAGGTTCAATCCCATTGAGTTTAAACTCTCTTCTGGATTCACAGTCGTATTCGGACATGGCTGCTCTGTAACCAGGTGTTAATGGCAGAGCTGGCTTCCTGCTTGCTTGTTTCTTCACTGGGGTGCTTCTAATCGCTACTTTTACTGAAGAATTCTCATCCATTACGTATTCAAAAGATCCCATTGAAAAGCATCTGCGAGAATCCACATTCTTGTTCTCACTACTTCCACTTTCCCCTGCATCGACATTTTTGTATTTTCCAAGCTTCACAGTCACTACAGTCGCATTTGAATCCTCTAATTTCGTAATCTCGCTCGACCCACCTTCGAATTCCCCATCTCCAACAAAACCCATTCGGGAATTTGACCCTGGAATCTGGTTTGTATGATTTGTAATCTCCCTATCTGATACGATATCTCTAGAACTCTCACTCCCAGATTCAAGAACAAGAACAATTGGTGAACAAGTAGTATGTGGGGAGAAATGATCAGGTAACAAACTAGATCTACACAAAGGGCAAGTTGAGTGAGACAACAGCCAAGTATCAATACATTCTGTATGAAAAGCATGGCTGCATTTTGGCAATAGCCTGAGTTTATCCTCCGGCTCAAACTCACAGAGACAAACAGCACAGTCAAATGGGGATTTGGATCCAATAATGGCTTTGTAATGGAAAACAGGAAGTGTATCAATGAAGGATTGGTCTACTCCAGAGTCATGGAGATGAAAGAGCTGCTGTAATTGGCCTTGAAAAGCAGTGACATTGTCAGAACTTTCAGGGTCTCTATGTAATGGGGGAGTCCATAGAAATCTAACAAGAAGATGAAGCAAACCAGAGACAAAGAAGACGATAGCGAGAATGATTATGATGAGAAGTACACTTGGACTCACCTTGTTTTCTAAGTTGAACCCACTGGATTGTGCTAAAGGAGGAGGCTGTGCAGCAAGAAAATAAGGCTGAAACTGTGGTGGTGAAGGGAAAAATCTTCCATTTACCTGAAGAAGTAGTGAATCCATGTTAATGGAGAAAAACCCAACTCGATTTGACTCGACTCAACTCAACTCATAGCACAAAAGCTCGTGGAAGTCAAAAGGGGGAGTTGGGTTTTGAGAGGGAAGAAAAACGAAATAAATGGGACAGATGGAGAG

Coding sequence (CDS)

ATGAATAAGATCAAAATCTGTAACCCATTAAATGCATACATCACTCACACACTCCTCAACTATCTCCTTCCCCTATTCATTTTGAATTTTAAATTCCCATTACCTATTTATTACCTTCTTTTCTTGGTTTTTCTTTTTGGTTCCCTCAATTTCAATTCATCACTCTATCTCTTCATGCATCCCCACTTCAGTAATCATCAATACACAACTGCAACTAAAAATTTCTTTTCTTTAATCCATTATTTCTATTTTCTATTATTCTACATAGATCTAAAAATTTAA

Protein sequence

MNKIKICNPLNAYITHTLLNYLLPLFILNFKFPLPIYYLLFLVFLFGSLNFNSSLYLFMHPHFSNHQYTTATKNFFSLIHYFYFLLFYIDLKI
Homology
The following BLAST results are available for this feature:
BLAST of Cmc02g0047081.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0047081.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0047081.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0047081.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc02g0047081Cmc02g0047081gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0047081.1-exonCmc02g0047081.1-exon-CMiso1.1chr02:12750171..12752153exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0047081.1-five_prime_utrCmc02g0047081.1-five_prime_utr-CMiso1.1chr02:12750171..12750336five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0047081.1-cdsCmc02g0047081.1-cds-CMiso1.1chr02:12750337..12750618CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0047081.1-three_prime_utrCmc02g0047081.1-three_prime_utr-CMiso1.1chr02:12750619..12752153three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc02g0047081.1Cmc02g0047081.1-proteinpolypeptide