Cmc02g0040541.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc02g0040541.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr02: 2399128 .. 2401894 (+)
Sequence length2535
RNA-Seq ExpressionCmc02g0040541.1
SyntenyCmc02g0040541.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTGGTGTCTGTTTCGATCTAAATAAGAGAAAAATAACAACTTTATGAATCATAGTAATTAAACACTATAATAATTAACCTCGACGAGATCCATAAAACCTTACGGATATTAACATTATTAATAGGATATTGAAAATTAGTTAAAAAGCCTAATACTTGATCTTATTCTTCATACAATTTCCTCATCTAATCTCTAAAATTTGCCCTAATTCTTCAAACACTCCATCAAAACATTTCCAAGCTTCCCTTCATCAATGGCTTCCACCACTTTCTCAATATCTTCTCCAGGGCTAATCTTCTTTGCTCCACTCAACAGTTGAGTCCCCAATTCATTTCTCACGAATCGGTAGATCGGGTAAGTGCTGCATTTCTTGATTCTATTTTCAATTTCGAAATCACCATTCTCGAATCTCCCTCTTGCATTTTCAACGTCTTTTTCCAATTTCGCCTTTAATTCCTCAAGAAACTCCGGAATTTGCTTGAATATGGCAATCCCTGTTTCGTTTCTGTTATCTTTTTTGTCTGTTGCAACTCCTTTCAATGCTTTCTCAACTAAAACTTCTAGTAACTTTGGGATTAAGGTGTAGGATGTGTTGGTGGGATCGTCGATGTAGGAGAAGACTTCCTCGCGCTCGATTACTTGCAAGAGATCTTTCTCGCAAAATCTTGATTCCAGAAGAGAACCATATTCTGCCATGTAGAGTGTTTTTCGGATGGTTTGTAGAAGGGCATTTTTCACTACCTCCCTCATATTTTCTTCGTATTGTCTTAAATCGATTGCTTGGCAAAGCGCTACCATGTATGTTGCAGACATGAGCTTTAGTATTTCAATGGCTTCAGCGGATTTTCTGGCTGAGATTAGACCTAGAGAGTTTACATCTTGATTGTGTTGTTCTGCACTTTGGACATGGGTTGTGACAGGATTTGCTAAGTATTGGAGCTCAGAGCAATAAGCGGCCATGGCGATTTCCGCCCCTTTGAAGCCGTAGTCCAAGCTAGGATTTGGTCCGCCGCTCAAATTAGATGGTAATCCGTTATTGTAATGATGACATACGAGTTCAGAGAATTGGGCAAACATTAGCTTTCCAATTGCAGCGATGGCGATTCGAAGATTATCCATGGAGACTCCAATTGGGGTCCCCTGAAAGTTTCCTCCATGTACAGCTACATCTCGACTAACATCAATTAATGGGTTATCATTCACAGAGTTGATTTCCCTTTCGATTGAATGAGTTGCCATTCGAATGACTTCAATTTGGGGTCCGAGCCATTGTGGAGAGGTTCGAAGTGCATAACGATCTTGTTTTGGCTTTGTCAATGGATCATTTTCAATGCAGATTTTTGCTTCTTTCATGAAATCGCTTTGGTTCAAGAGGAACTCCATGACTGCAGCGGATTCAATCTGGCCAGGGTGGTGCTTAAGCTTATGGGTTAACGGGTCTGTAAATTCTGGCTTCCCAAGCATGGCTTCACAGAACAAAGCAGAGAGAACACTGGCTAAAAGAGCCAAAATGTTGGCGTCGTAGCAAACCGTAGCAGCAACAGCTGACCCAACAGCAGTTCCATTGACTAGAGCTAAACCTTCCTTTGCTTGAAGCTCAAATGGGCCTGCAATTCCAGCTCGTTTGAGAGCTTCAATGGCACTAATCTCATCACCTTCAATGGTAGTAACCTTGGAATTATGCCTTCCAGTGACAACGCCAGCAATATAAGACAGAGGAACAAGATCTCCAGAAGCAGTAATCGTCCCTCTCAAAGGCAACTTTGGGATCAAATTCCAATTCATCAACTTCACTACAGCTTCCAGAATTTCCCAACGAATCCCTGAGTAGCCTTGCATCAATGTGTTTGTTCTAACAAGCATCGCTGCCTTCGAGTAGCTAGATGGAAGGTTCTCCTTTCCAATGACACCAGCATTGAGGAATCTAATAAGCTCTGTTTGGAGGTCGGATATTTTGGTCGTACGGCGATGAGAGGTGGCACCAAAGCCAGTGGTAACTCCATATATATCGATTCCACTCGATACTTTCTCAGCAACCCATTTTGCACTTTTGGCCACACGATCATGTGCCACAGATTCATTCATGATGACTTTGACATTGCTTCGACGAGCAATGGCGGTTACCTGAGCGACAGTAAGCTTGGTGCCTTCAACGTCAACAGTTTGAGCCTCTTGAAACTCTGATAACATGCAACAAACCTCCTCAAAATGGGTGCGGCTGAGAGCGTTGGCAGCTTTGACCCAATGGTCGGAGGTCGAAACGGAGGAAGCCGATTTTGATAGAGGAACAAAACCGGTTTTGGAGCGAGCTGAAGAGCAGAGAAATTGAGAGTTGGCCATTAGGAAGAAGAAGAAACTTCGGAAAGAAAGGAGAGTGATTGGATTGTGTAGAGTTCTAAGATTGTTGGATGAGTTTTGTGGGATTTGGAAGAAGAAATTGGACATGAATTTATAGCAAATTTTAATGGTTTGATTTCTAATTTCTTGCTGAAGTTGAAGCTGAAATTCTGAGGAAATTACACAAAACAGAAGCTTCTACTTCCCTTTCATGAAAAATCATCTCTTTTTTTTTTCTCTCTTTCAAAACATTTTGTTTTTTCTTTTGTATTTTACATTCTAGTTTCTTAGTCTTTTTTCATGGACAAATGAGCATTGACTGATGGTGAGATCTCTCTCTATTACAAGACTCCTTGCTTTTTCGTTATTATTAACATAATTATCTAATTTTAGGTTGTGCACACACACACACATTAAGCACTTAAAAG

mRNA sequence

CTTTGGTGTCTGTTTCGATCTAAATAAGAGAAAAATAACAACTTTATGAATCATAGTAATTAAACACTATAATAATTAACCTCGACGAGATCCATAAAACCTTACGGATATTAACATTATTAATAGGATATTGAAAATTAGTTAAAAAGCCTAATACTTGATCTTATTCTTCATACAATTTCCTCATCTAATCTCTAAAATTTGCCCTAATTCTTCAAACACTCCATCAAAACATTTCCAAGCTTCCCTTCATCAATGGCTTCCACCACTTTCTCAATATCTTCTCCAGGGCTAATCTTCTTTGCTCCACTCAACAGTTGAGTCCCCAATTCATTTCTCACGAATCGGTAGATCGGGATGTGTTGGTGGGATCGTCGATGTAGGAGAAGACTTCCTCGCGCTCGATTACTTGCAAGAGATCTTTCTCGCAAAATCTTGATTCCAGAAGAGAACCATATTCTGCCATGTAGAGTGTTTTTCGGATGGTTTGTAGAAGGGCATTTTTCACTACCTCCCTCATATTTTCTTCGTATTGTCTTAAATCGATTGCTTGGCAAAGCGCTACCATGTATGTTGCAGACATGAGCTTTAGTATTTCAATGGCTTCAGCGGATTTTCTGGCTGAGATTAGACCTAGAGAGTTTACATCTTGATTGTGTTGTTCTGCACTTTGGACATGGGTTGTGACAGGATTTGCTAAGTATTGGAGCTCAGAGCAATAAGCGGCCATGGCGATTTCCGCCCCTTTGAAGCCGTAGTCCAAGCTAGGATTTGGTCCGCCGCTCAAATTAGATGGTAATCCGTTATTGTAATGATGACATACGAGTTCAGAGAATTGGGCAAACATTAGCTTTCCAATTGCAGCGATGGCGATTCGAAGATTATCCATGGAGACTCCAATTGGGGTCCCCTGAAAGTTTCCTCCATGTACAGCTACATCTCGACTAACATCAATTAATGGGTTATCATTCACAGAGTTGATTTCCCTTTCGATTGAATGAGTTGCCATTCGAATGACTTCAATTTGGGGTCCGAGCCATTGTGGAGAGGTTCGAAGTGCATAACGATCTTGTTTTGGCTTTGTCAATGGATCATTTTCAATGCAGATTTTTGCTTCTTTCATGAAATCGCTTTGGTTCAAGAGGAACTCCATGACTGCAGCGGATTCAATCTGGCCAGGGTGGTGCTTAAGCTTATGGGTTAACGGGTCTGTAAATTCTGGCTTCCCAAGCATGGCTTCACAGAACAAAGCAGAGAGAACACTGGCTAAAAGAGCCAAAATGTTGGCGTCGTAGCAAACCGTAGCAGCAACAGCTGACCCAACAGCAGTTCCATTGACTAGAGCTAAACCTTCCTTTGCTTGAAGCTCAAATGGGCCTGCAATTCCAGCTCGTTTGAGAGCTTCAATGGCACTAATCTCATCACCTTCAATGGTAGTAACCTTGGAATTATGCCTTCCAGTGACAACGCCAGCAATATAAGACAGAGGAACAAGATCTCCAGAAGCAGTAATCGTCCCTCTCAAAGGCAACTTTGGGATCAAATTCCAATTCATCAACTTCACTACAGCTTCCAGAATTTCCCAACGAATCCCTGAGTAGCCTTGCATCAATGTGTTTGTTCTAACAAGCATCGCTGCCTTCGAGTAGCTAGATGGAAGGTTCTCCTTTCCAATGACACCAGCATTGAGGAATCTAATAAGCTCTGTTTGGAGGTCGGATATTTTGGTCGTACGGCGATGAGAGGTGGCACCAAAGCCAGTGGTAACTCCATATATATCGATTCCACTCGATACTTTCTCAGCAACCCATTTTGCACTTTTGGCCACACGATCATGTGCCACAGATTCATTCATGATGACTTTGACATTGCTTCGACGAGCAATGGCGGTTACCTGAGCGACAGTAAGCTTGGTGCCTTCAACGTCAACAGTTTGAGCCTCTTGAAACTCTGATAACATGCAACAAACCTCCTCAAAATGGGTGCGGCTGAGAGCGTTGGCAGCTTTGACCCAATGGTCGGAGGTCGAAACGGAGGAAGCCGATTTTGATAGAGGAACAAAACCGGTTTTGGAGCGAGCTGAAGAGCAGAGAAATTGAGAGTTGGCCATTAGGAAGAAGAAGAAACTTCGGAAAGAAAGGAGAGTGATTGGATTGTGTAGAGTTCTAAGATTGTTGGATGAGTTTTGTGGGATTTGGAAGAAGAAATTGGACATGAATTTATAGCAAATTTTAATGGTTTGATTTCTAATTTCTTGCTGAAGTTGAAGCTGAAATTCTGAGGAAATTACACAAAACAGAAGCTTCTACTTCCCTTTCATGAAAAATCATCTCTTTTTTTTTTCTCTCTTTCAAAACATTTTGTTTTTTCTTTTGTATTTTACATTCTAGTTTCTTAGTCTTTTTTCATGGACAAATGAGCATTGACTGATGGTGAGATCTCTCTCTATTACAAGACTCCTTGCTTTTTCGTTATTATTAACATAATTATCTAATTTTAGGTTGTGCACACACACACACATTAAGCACTTAAAAG

Coding sequence (CDS)

ATGAGAGGTGGCACCAAAGCCAGTGGTAACTCCATATATATCGATTCCACTCGATACTTTCTCAGCAACCCATTTTGCACTTTTGGCCACACGATCATGTGCCACAGATTCATTCATGATGACTTTGACATTGCTTCGACGAGCAATGGCGGTTACCTGAGCGACAGTAAGCTTGGTGCCTTCAACGTCAACAGTTTGAGCCTCTTGAAACTCTGA

Protein sequence

MRGGTKASGNSIYIDSTRYFLSNPFCTFGHTIMCHRFIHDDFDIASTSNGGYLSDSKLGAFNVNSLSLLKL
Homology
The following BLAST results are available for this feature:
BLAST of Cmc02g0040541.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0040541.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0040541.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc02g0040541.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc02g0040541Cmc02g0040541gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0040541.1-exonCmc02g0040541.1-exon-CMiso1.1chr02:2399128..2399483exon
Cmc02g0040541.1-exonCmc02g0040541.1-exon-CMiso1.1chr02:2399716..2401894exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0040541.1-five_prime_utrCmc02g0040541.1-five_prime_utr-CMiso1.1chr02:2399128..2399483five_prime_UTR
Cmc02g0040541.1-five_prime_utrCmc02g0040541.1-five_prime_utr-CMiso1.1chr02:2399716..2401097five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0040541.1-cdsCmc02g0040541.1-cds-CMiso1.1chr02:2401098..2401313CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc02g0040541.1-three_prime_utrCmc02g0040541.1-three_prime_utr-CMiso1.1chr02:2401314..2401894three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc02g0040541.1Cmc02g0040541.1-proteinpolypeptide