Cmc02g0037321.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc02g0037321.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Low temperature and salt responsive protein family
Location	CMiso1.1chr02: 176323 .. 177543 (+)
Sequence length	1035
RNA-Seq Expression	Cmc02g0037321.1
Synteny	Cmc02g0037321.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTGCGTGTGAGAAGAATAGATAGTGTGTGTGTGTGTGTGTGTTGTGGTTTTTGAAAAAGGCAAATGAAGTTATGAATGTGTTTATATATATATATGTGTGTGTGTATAGTAACCCCACCTTCATCACTACCCATTACTTCATTCCAATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTGTTTTGTGCAAATCAGAAGAAGAAGAAGAAAGAAAAAGAAAAATGGCAGACCAACGAACAACAAATTGCATCGATATCCTCCTCGCTATTCTCCTCCCTCCTCTTGGTGTCTTTCTCAAATTTGGATGCCAAGTCTGATCATCATCTCTTCCTTATTCTTCTCTTAATTTTATTTTTCATTATCTCACTAACTCTCTCTTTCAATTACTTCATCATTTCAGGTTGAGTTTTGGATCTGCTTGGTCCTAACTTTCTTTGGTTACATCCCTGGCATTATTTATGCTGTTTATGCCATCACCAAGTGATCACCGAATTCAAAGTCTGTTTTTATTCCCTGATTATCCTTTTCTTTTGCTAATTAACTTCTTCTTTTTTAGTTATTAAATTTGAATTATGTGTTTGATTTCACTTTTCAGGGATTGATGGAAGGAATTATTGGAACTCATCATCATGGTCTCTCCTCACCGATACTCTCCCTTCCTTTTTCTATTTTCCTTTTTGCTAATTTCTCTTGATCTCTGTTTTGTGTGTTTGCTTGTGTGATAATCATCCCATCCATCAAAGACATCTACACAATTGCTGCTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTGTAATTTGAATTATTTGTGGGGGTAATTTAATTGTGTGTCGTTCTTGTTGTATTGATTGAATTGGTTGCTGTAAAGAAGAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGGATAAGGACAAAGTAAGTTTGTTGAAGAATTGGAATGTGTTGAGTGTGGATTACGTTTCTTTCTTTCATTCTCAAAAGGTTCCCTTTCCCTATTATATTAAAAGTTTGTGCTCACCTTATCCTCCCTTTTTTCATCTCTATTCTCATCTTTTTACCCAATGCCAATCCTACAAATAATATCATACTATTCTACCTACTCTACGCTACTTTCCAAATTTCTATATTTTATTTCATATTTTACCAATGCAATTGGCGTAATTGTAGGTGGAACCTATTCAAGTATTAATAGTAATGA

mRNA sequence

CTTGTTGCGTGTGAGAAGAATAGATAGTGTGTGTGTGTGTGTGTGTTGTGGTTTTTGAAAAAGGCAAATGAAGTTATGAATGTGTTTATATATATATATGTGTGTGTGTATAGTAACCCCACCTTCATCACTACCCATTACTTCATTCCAATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTGTTTTGTGCAAATCAGAAGAAGAAGAAGAAAGAAAAAGAAAAATGGCAGACCAACGAACAACAAATTGCATCGATATCCTCCTCGCTATTCTCCTCCCTCCTCTTGGTGTCTTTCTCAAATTTGGATGCCAAGTTGAGTTTTGGATCTGCTTGGTCCTAACTTTCTTTGGTTACATCCCTGGCATTATTTATGCTGTTTATGCCATCACCAAGTGATCACCGAATTCAAAGGATTGATGGAAGGAATTATTGGAACTCATCATCATGGTCTCTCCTCACCGATACTCTCCCTTCCTTTTTCTATTTTCCTTTTTGCTAATTTCTCTTGATCTCTGTTTTGTGTGTTTGCTTGTGTGATAATCATCCCATCCATCAAAGACATCTACACAATTGCTGCTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTGTAATTTGAATTATTTGTGGGGGTAATTTAATTGTGTGTCGTTCTTGTTGTATTGATTGAATTGGTTGCTGTAAAGAAGAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAGGATAAGGACAAAGTAAGTTTGTTGAAGAATTGGAATGTGTTGAGTGTGGATTACGTTTCTTTCTTTCATTCTCAAAAGGTTCCCTTTCCCTATTATATTAAAAGTTTGTGCTCACCTTATCCTCCCTTTTTTCATCTCTATTCTCATCTTTTTACCCAATGCCAATCCTACAAATAATATCATACTATTCTACCTACTCTACGCTACTTTCCAAATTTCTATATTTTATTTCATATTTTACCAATGCAATTGGCGTAATTGTAGGTGGAACCTATTCAAGTATTAATAGTAATGA

Coding sequence (CDS)

ATGGCAGACCAACGAACAACAAATTGCATCGATATCCTCCTCGCTATTCTCCTCCCTCCTCTTGGTGTCTTTCTCAAATTTGGATGCCAAGTTGAGTTTTGGATCTGCTTGGTCCTAACTTTCTTTGGTTACATCCCTGGCATTATTTATGCTGTTTATGCCATCACCAAGTGA

Protein sequence

MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK

Homology

[Close]

BLAST of Cmc02g0037321.1 vs. NCBI nr
Match: XP_008450512.1 (PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 5.0e-23
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+RTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 1  MADERTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. NCBI nr
Match: XP_038879764.1 (hydrophobic protein LTI6B-like [Benincasa hispida])

HSP 1 Score: 114.8 bits (286), Expect = 2.5e-22
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+ TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 37 MADEATTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 93

[Close]

BLAST of Cmc02g0037321.1 vs. NCBI nr
Match: KGN65991.1 (hypothetical protein Csa_007015 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 3.3e-22
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+ TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 1  MADEGTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. NCBI nr
Match: RZC48826.1 (hypothetical protein C5167_017259 [Papaver somniferum] >RZC88164.1 hypothetical protein C5167_015966 [Papaver somniferum])

HSP 1 Score: 110.5 bits (275), Expect = 4.7e-21
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+ T NCIDILLAI+LPPLGVFLKFGCQ+EFWICL+LTFFGYIPGIIYA+YAITK
Sbjct: 1  MADESTLNCIDILLAIILPPLGVFLKFGCQIEFWICLILTFFGYIPGIIYAIYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. NCBI nr
Match: XP_004494506.1 (hydrophobic protein LTI6B-like [Cicer arietinum])

HSP 1 Score: 110.2 bits (274), Expect = 6.1e-21
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+ T NCIDILLAILLPPLGVFLKFGC VEFWICLVLTFFGYIPGIIYA+YAITK
Sbjct: 1  MADEGTANCIDILLAILLPPLGVFLKFGCHVEFWICLVLTFFGYIPGIIYAIYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy Swiss-Prot
Match: A2Y075 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 3.5e-19
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 6  TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          T NCIDIL+AI+LPPLGVFLKFGC  EFWICL+LTF GYIPGIIYA+YAITK
Sbjct: 4  TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy Swiss-Prot
Match: Q0DKW8 (Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica OX=39947 GN=LTI6B PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.5e-19
Identity = 44/52 (84.62%), Postives = 48/52 (92.31%), Query Frame = 0


Query: 6  TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          T NCIDIL+AI+LPPLGVFLKFGC  EFWICL+LTF GYIPGIIYA+YAITK
Sbjct: 4  TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy Swiss-Prot
Match: Q8H5T6 (Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica OX=39947 GN=LTI6A PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 7.8e-19
Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD  T  CIDI+LAI+LPPLGVF KFGC +EFWICL+LTFFGY+PGIIYAV+ ITK
Sbjct: 1  MADS-TATCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVITK 56

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy Swiss-Prot
Match: Q9ZNS6 (Hydrophobic protein RCI2B OS=Arabidopsis thaliana OX=3702 GN=RCI2B PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 9.5e-17
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = 0


Query: 6  TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          T   ++I+LAI+LPPLGVFLKFGC+VEFWICL+LT FGY+PGI+YA+Y ITK
Sbjct: 3  TATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy Swiss-Prot
Match: Q9ZNQ7 (Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.6e-16
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 6  TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          T   +DI++AILLPPLGVFL+FGC VEFWICLVLT  GYIPGIIYA+Y +TK
Sbjct: 3  TATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy TrEMBL
Match: A0A1S3BNR9 (hydrophobic protein LTI6B-like OS=Cucumis melo OX=3656 GN=LOC103492093 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-23
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+RTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 1  MADERTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy TrEMBL
Match: A0A0A0M1D6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560745 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.6e-22
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+ TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 1  MADEGTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy TrEMBL
Match: A0A4Y7IL50 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_017259 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-21
Identity = 50/57 (87.72%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+ T NCIDILLAI+LPPLGVFLKFGCQ+EFWICL+LTFFGYIPGIIYA+YAITK
Sbjct: 1  MADESTLNCIDILLAIILPPLGVFLKFGCQIEFWICLILTFFGYIPGIIYAIYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy TrEMBL
Match: A0A1S2XTZ3 (hydrophobic protein LTI6B-like OS=Cicer arietinum OX=3827 GN=LOC101498830 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-21
Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD+ T NCIDILLAILLPPLGVFLKFGC VEFWICLVLTFFGYIPGIIYA+YAITK
Sbjct: 1  MADEGTANCIDILLAILLPPLGVFLKFGCHVEFWICLVLTFFGYIPGIIYAIYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. ExPASy TrEMBL
Match: A0A6J1HUN0 (hydrophobic protein LTI6B-like OS=Cucurbita maxima OX=3661 GN=LOC111467977 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          MAD  T NCIDILLAILLPPLGVFLKFGCQVEFWICLVLT FGY+PGIIYAVYAITK
Sbjct: 1  MADPGTANCIDILLAILLPPLGVFLKFGCQVEFWICLVLTLFGYLPGIIYAVYAITK 57

[Close]

BLAST of Cmc02g0037321.1 vs. TAIR 10
Match: AT3G05890.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 86.7 bits (213), Expect = 6.8e-18
Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = 0


Query: 6  TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          T   ++I+LAI+LPPLGVFLKFGC+VEFWICL+LT FGY+PGI+YA+Y ITK
Sbjct: 3  TATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

[Close]

BLAST of Cmc02g0037321.1 vs. TAIR 10
Match: AT3G05880.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-17
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0


Query: 6  TTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          T   +DI++AILLPPLGVFL+FGC VEFWICLVLT  GYIPGIIYA+Y +TK
Sbjct: 3  TATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

[Close]

BLAST of Cmc02g0037321.1 vs. TAIR 10
Match: AT2G38905.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-14
Identity = 33/46 (71.74%), Postives = 42/46 (91.30%), Query Frame = 0


Query: 10 IDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAI 56
          ++I+LAILLPP+GVFL++GC VEFWICL+LT  GYIPGIIYA+Y +
Sbjct: 7  LEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 52

[Close]

BLAST of Cmc02g0037321.1 vs. TAIR 10
Match: AT1G57550.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-12
Identity = 27/48 (56.25%), Postives = 41/48 (85.42%), Query Frame = 0


Query: 10 IDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 58
          +++L AI +PP+GVFL++G  +EFW+CL+LT F +IPG+IYA+Y +TK
Sbjct: 5  LEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVLTK 52

[Close]

BLAST of Cmc02g0037321.1 vs. TAIR 10
Match: AT4G30650.1 (Low temperature and salt responsive protein family )

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-11
Identity = 38/56 (67.86%), Postives = 41/56 (73.21%), Query Frame = 0


Query: 1  MADQRTTNCIDILLAILLPPLGVFLKFG-CQVEFWICLVLTFFGYIPGIIYAVYAI 56
          MA      C +IL+AILLPPLGV LK G C VEF ICLVLT  GYIPGIIYA+Y I
Sbjct: 1  MASNMEVFC-EILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVI 55

The following BLAST results are available for this feature:

BLAST of Cmc02g0037321.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450512.1	5.0e-23	98.25	PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo]	[more]
XP_038879764.1	2.5e-22	96.49	hydrophobic protein LTI6B-like [Benincasa hispida]	[more]
KGN65991.1	3.3e-22	96.49	hypothetical protein Csa_007015 [Cucumis sativus]	[more]
RZC48826.1	4.7e-21	87.72	hypothetical protein C5167_017259 [Papaver somniferum] >RZC88164.1 hypothetical ...	[more]
XP_004494506.1	6.1e-21	91.23	hydrophobic protein LTI6B-like [Cicer arietinum]	[more]

BLAST of Cmc02g0037321.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Y075	3.5e-19	84.62	Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica OX=39946 GN=LTI6B PE=3 S...	[more]
Q0DKW8	3.5e-19	84.62	Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica OX=39947 GN=LTI6B PE=2...	[more]
Q8H5T6	7.8e-19	77.19	Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica OX=39947 GN=LTI6A PE=2...	[more]
Q9ZNS6	9.5e-17	73.08	Hydrophobic protein RCI2B OS=Arabidopsis thaliana OX=3702 GN=RCI2B PE=2 SV=1	[more]
Q9ZNQ7	1.6e-16	75.00	Hydrophobic protein RCI2A OS=Arabidopsis thaliana OX=3702 GN=RCI2A PE=2 SV=1	[more]

BLAST of Cmc02g0037321.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNR9	2.4e-23	98.25	hydrophobic protein LTI6B-like OS=Cucumis melo OX=3656 GN=LOC103492093 PE=3 SV=1	[more]
A0A0A0M1D6	1.6e-22	96.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560745 PE=3 SV=1	[more]
A0A4Y7IL50	2.3e-21	87.72	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_017259 PE=3 SV=1	[more]
A0A1S2XTZ3	3.0e-21	91.23	hydrophobic protein LTI6B-like OS=Cicer arietinum OX=3827 GN=LOC101498830 PE=3 S...	[more]
A0A6J1HUN0	1.1e-20	91.23	hydrophobic protein LTI6B-like OS=Cucurbita maxima OX=3661 GN=LOC111467977 PE=3 ...	[more]

BLAST of Cmc02g0037321.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05890.1	6.8e-18	73.08	Low temperature and salt responsive protein family	[more]
AT3G05880.1	1.2e-17	75.00	Low temperature and salt responsive protein family	[more]
AT2G38905.1	1.6e-14	71.74	Low temperature and salt responsive protein family	[more]
AT1G57550.1	2.5e-12	56.25	Low temperature and salt responsive protein family	[more]
AT4G30650.1	2.1e-11	67.86	Low temperature and salt responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000612	Proteolipid membrane potential modulator	PFAM	PF01679	Pmp3	coord: 9..55 e-value: 3.7E-20 score: 71.9
IPR000612	Proteolipid membrane potential modulator	PANTHER	PTHR21659	HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED	coord: 1..57
IPR000612	Proteolipid membrane potential modulator	PROSITE	PS01309	UPF0057	coord: 13..28
None	No IPR available	PANTHER	PTHR21659:SF81	LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN	coord: 1..57

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc02g0037321	Cmc02g0037321	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc02g0037321.1-exon	Cmc02g0037321.1-exon-CMiso1.1chr02:176323..176645	exon
Cmc02g0037321.1-exon	Cmc02g0037321.1-exon-CMiso1.1chr02:176735..176832	exon
Cmc02g0037321.1-exon	Cmc02g0037321.1-exon-CMiso1.1chr02:176930..177543	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc02g0037321.1-five_prime_utr	Cmc02g0037321.1-five_prime_utr-CMiso1.1chr02:176323..176555	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc02g0037321.1-cds	Cmc02g0037321.1-cds-CMiso1.1chr02:176556..176645	CDS
Cmc02g0037321.1-cds	Cmc02g0037321.1-cds-CMiso1.1chr02:176735..176818	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc02g0037321.1-three_prime_utr	Cmc02g0037321.1-three_prime_utr-CMiso1.1chr02:176819..176832	three_prime_UTR
Cmc02g0037321.1-three_prime_utr	Cmc02g0037321.1-three_prime_utr-CMiso1.1chr02:176930..177543	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc02g0037321.1	Cmc02g0037321.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
molecular_function	GO:0004729	oxygen-dependent protoporphyrinogen oxidase activity