Cmc01g0008071.1 (mRNA) Melon (Charmono) v1.1

Overview
NameCmc01g0008071.1
TypemRNA
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr01: 3111007 .. 3113105 (+)
Sequence length613
RNA-Seq ExpressionCmc01g0008071.1
SyntenyCmc01g0008071.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTCTCTTCAAATTAAACCTTCTTCTTCATCACCTTCCTCATCAACCTTTCCCTCATCCTTACCTTCCTTCTCTCCCAAACATGTGCTTCTAATAATATATAATTTGTAAGTTCTATGCCTTTCTTCTTACACTCACACACATTTTTATTCTTACCTTATTTTATTTTTGTTCATTCACTAAATTATTTACGCAACACATACACCTTCATCTCATACCAAACTGAGATCGCGATGAGCTAGAAAAGTCTTTAACTGAAGATCACGTTTATGAGATCCTTGAGCACAATTGTTTTATTTTTGTTCATGCATGTTCTCAAGTAGTTATGGATTGAAATATAAATTTTAGATACTATCTTTTATTTTTAAAAAAATATAGTTTTTGATTCGTGCATTTTATTAAAGACAATGACATACCCTCTTATTTAGTCAATGTTGAACTTCTCTCGCACCCGAACAAATAAGAGATTATGAATCTCTTTCTTAAATAGTCATGTATTCCTCTAAGTTTTATTTAGGTTAACTTTTTTTTTTCCATGGAGTACACTACTTATCTCATAGAGCTTAATCATATGAGTCACACCATAGCTACTTTTTAGGTTCTATCTTAACATATTTTATCGACATGACTAAATTTAGTTTGGAACCATTTGTCAAAAAGAAAAAAAAAAAGGAACTCTCACAATCTAACAATTATAAACTCTTGTTTGAGTGTAACGACCCACGAAATAATTCTTTCCATTATGATTCTTTCTCTTAGAAGTCCCACAAATAATAACCTTTATTTTTATTTACACTTTTTTTATTATAACTCTTATTTCATCATGTGCCTCATGGTTAGAATTTTAAACGTGGATTATGGTGATAAAATAAATTTTTATTTACGAGCAAAATATGCTTTTGATTTTTAAAATTTGATGTTTGTATTTATTTGGTTCCTGAAGTATAAAAGGGACACTTTAGTTGGTAAGTTTTGAAAAATTCTTCTAAAATGATACCTCAAAGATTAAAATATCTCTTTTTAAATTTCATGATCCAAATAAACACAAGGATCGAATAGATACAAATAAGAAACTCGGGATGAAAATGTGCAGTTTAATTTTTATTTATTTAATCAATTAGGTTGGGTGCTGCTGAGTTAGCATGGAGTGATTGATTGGAAACCTTTGATATTTGACACTTTTTGTGTATTTAAGAAAAAAAGAAAAGTAGACCACTTTTTCTTTTTTTAGGGTTTTGTCGGTGTTGTGGATCCCACCAAGTCTTCGTACAAATAACTCACTTTCTCTTTTCCTTAAATGTTGTTATTATATTCTTAAATGCTTAATTCTAATTTTGTACTTTCAATACATATTAAATTTATTGAAATTGATTAATTAATAATAATAAATTTTCTCAAAGAAAACACAATATATAAATATTCCTTCTAAAGTTTTTAATTGAAAACCCCGTACAAAATGATATAATTTGATTTTTTGATTTACTTTAGTGCAATCATTGAATGAAAAGTAATCTATGTGACTGTATTCATGTAATATTAAAAGAGTTAAATATATAGAATCTCCCTTTATGACATTATATTGAATTATTGTAGATATCTATTGCAAAACTCGAGTCAATTGATTGCTATAATCCATATACTTTCAAAATGACTCTATTCGTTAACGATCATCATGCTAAGCAGCTACCTCAGCCTTCAACTTACAAAGGACGTCATTGTATAATCATCGTCTAGGAGGATGATGGATCAAAAAGACCAAAATCAAGTAAAAGGAGAAGAAATGGCAGTTTAACAAAATGAGAATGCATGATCTCACACAATGCATTTTCTTTTGATTTTATTGCTATATATGCTTCTCTTTTAATATATAATATATATGCTCATCATGGAAAAAACAAATCCAACGTTGGTTGTACTTGGAGGAGTTCCCCTTCACCATACTTCAGAAGAATTTCTTCTTTTCTTTTACAGTGCACATTTGCATGGGAAGTTTTATAAGACAAAGTTATAATGAATCTTAGGGTTTCCACTTGATGTTAAAGTTTGGCCATGCAGTCATAGTTCGTGTTATATTATTATTTCAAATGTTGCTTCATTTG

mRNA sequence

TTCTCTCTTCAAATTAAACCTTCTTCTTCATCACCTTCCTCATCAACCTTTCCCTCATCCTTACCTTCCTTCTCTCCCAAACATGTGCTTCTAATAATATATAATTTATATCTATTGCAAAACTCGAGTCAATTGATTGCTATAATCCATATACTTTCAAAATGACTCTATTCGTTAACGATCATCATGCTAAGCAGCTACCTCAGCCTTCAACTTACAAAGGACGTCATTGTATAATCATCGTCTAGGAGGATGATGGATCAAAAAGACCAAAATCAAGTAAAAGGAGAAGAAATGGCAGTTTAACAAAATGAGAATGCATGATCTCACACAATGCATTTTCTTTTGATTTTATTGCTATATATGCTTCTCTTTTAATATATAATATATATGCTCATCATGGAAAAAACAAATCCAACGTTGGTTGTACTTGGAGGAGTTCCCCTTCACCATACTTCAGAAGAATTTCTTCTTTTCTTTTACAGTGCACATTTGCATGGGAAGTTTTATAAGACAAAGTTATAATGAATCTTAGGGTTTCCACTTGATGTTAAAGTTTGGCCATGCAGTCATAGTTCGTGTTATATTATTATTTCAAATGTTGCTTCATTTG

Coding sequence (CDS)

ATGATCTCACACAATGCATTTTCTTTTGATTTTATTGCTATATATGCTTCTCTTTTAATATATAATATATATGCTCATCATGGAAAAAACAAATCCAACGTTGGTTGTACTTGGAGGAGTTCCCCTTCACCATACTTCAGAAGAATTTCTTCTTTTCTTTTACAGTGCACATTTGCATGGGAAGTTTTATAA

Protein sequence

MISHNAFSFDFIAIYASLLIYNIYAHHGKNKSNVGCTWRSSPSPYFRRISSFLLQCTFAWEVL
Homology
The following BLAST results are available for this feature:
BLAST of Cmc01g0008071.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0008071.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0008071.1 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0008071.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cmc01g0008071Cmc01g0008071gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc01g0008071.1-exonCmc01g0008071.1-exon-CMiso1.1chr01:3111007..3111113exon
Cmc01g0008071.1-exonCmc01g0008071.1-exon-CMiso1.1chr01:3112600..3113105exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc01g0008071.1-five_prime_utrCmc01g0008071.1-five_prime_utr-CMiso1.1chr01:3111007..3111113five_prime_UTR
Cmc01g0008071.1-five_prime_utrCmc01g0008071.1-five_prime_utr-CMiso1.1chr01:3112600..3112812five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc01g0008071.1-cdsCmc01g0008071.1-cds-CMiso1.1chr01:3112813..3113004CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cmc01g0008071.1-three_prime_utrCmc01g0008071.1-three_prime_utr-CMiso1.1chr01:3113005..3113105three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cmc01g0008071.1Cmc01g0008071.1-proteinpolypeptide