Cmc01g0004391.1 (mRNA) Melon (Charmono) v1.1

Overview


Name	Cmc01g0004391.1
Type	mRNA
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	pathogenesis-related protein 1-like
Location	CMiso1.1chr01: 1022538 .. 1023029 (-)
Sequence length	492
RNA-Seq Expression	Cmc01g0004391.1
Synteny	Cmc01g0004391.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCTCAACCTCTCCTTCATTCTCTTTTGTGTCTTGAACTGCTTCACCATGCTTCCCTCTTCTCTCGCTCAAGACTCGCCTCAAGACTATCTCAATGGCCACAATCAGGCCCGTGCTGCAGTTCGTGTCCGGCTTATCCAATGGGACGAGAAGGTGGCAAATTATTCCAGACAATATGCCAACCTACGCATGAATGATTGTAGGTTGGTGCATTCAAATGGACCATACGGGGAGAATATTGCATGGGGTAGCCCTGACTTGAGTGGCACCGATGCAGTCAAACTTTGGGTGAATGAGAAGCAGTACTACGACTATAACACCAACTCATGCGCCAGCGGAAAGGTGTGTGGCCATTATACTCAAGTGGTTTGGAAGAACTCAGTGAGACTTGGATGTGCAAAAGTGAAGTGCAGAAACAAAGGTGGTGTGTTTATTGTTTGTAACTATGACCCTAGAGGCAATATTGTTGGTCAGAGGCCATATTAA

mRNA sequence

ATGGATCTTCTCAACCTCTCCTTCATTCTCTTTTGTGTCTTGAACTGCTTCACCATGCTTCCCTCTTCTCTCGCTCAAGACTCGCCTCAAGACTATCTCAATGGCCACAATCAGGCCCGTGCTGCAGTTCGTGTCCGGCTTATCCAATGGGACGAGAAGGTGGCAAATTATTCCAGACAATATGCCAACCTACGCATGAATGATTGTAGGTTGGTGCATTCAAATGGACCATACGGGGAGAATATTGCATGGGGTAGCCCTGACTTGAGTGGCACCGATGCAGTCAAACTTTGGGTGAATGAGAAGCAGTACTACGACTATAACACCAACTCATGCGCCAGCGGAAAGGTGTGTGGCCATTATACTCAAGTGGTTTGGAAGAACTCAGTGAGACTTGGATGTGCAAAAGTGAAGTGCAGAAACAAAGGTGGTGTGTTTATTGTTTGTAACTATGACCCTAGAGGCAATATTGTTGGTCAGAGGCCATATTAA

Coding sequence (CDS)

ATGGATCTTCTCAACCTCTCCTTCATTCTCTTTTGTGTCTTGAACTGCTTCACCATGCTTCCCTCTTCTCTCGCTCAAGACTCGCCTCAAGACTATCTCAATGGCCACAATCAGGCCCGTGCTGCAGTTCGTGTCCGGCTTATCCAATGGGACGAGAAGGTGGCAAATTATTCCAGACAATATGCCAACCTACGCATGAATGATTGTAGGTTGGTGCATTCAAATGGACCATACGGGGAGAATATTGCATGGGGTAGCCCTGACTTGAGTGGCACCGATGCAGTCAAACTTTGGGTGAATGAGAAGCAGTACTACGACTATAACACCAACTCATGCGCCAGCGGAAAGGTGTGTGGCCATTATACTCAAGTGGTTTGGAAGAACTCAGTGAGACTTGGATGTGCAAAAGTGAAGTGCAGAAACAAAGGTGGTGTGTTTATTGTTTGTAACTATGACCCTAGAGGCAATATTGTTGGTCAGAGGCCATATTAA

Protein sequence

MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY

Homology

[Close]

BLAST of Cmc01g0004391.1 vs. NCBI nr
Match: XP_008455062.1 (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo] >KAA0031383.1 pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06835.1 pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 352.4 bits (903), Expect = 2.0e-93
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120
           YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cmc01g0004391.1 vs. NCBI nr
Match: XP_004136929.2 (pathogenesis-related protein 1 [Cucumis sativus] >KGN43833.1 hypothetical protein Csa_017202 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.1e-82
Identity = 144/163 (88.34%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           MDLLNLS ILFCVL+CFTMLPSSLAQDSPQDY+N HN ARAAV V  I+WDEKVANYSR 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120
           YAN RMNDCRLVHSNGPYGENIAWGSPDLSG +AVKLWV+EKQYY+YN+NSCASGKVCGH
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           YTQVVWKNS+RLGCAKVKC+NKGG FIVCNYDPRGNIVGQRPY
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cmc01g0004391.1 vs. NCBI nr
Match: XP_038887491.1 (pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 278.9 bits (712), Expect = 2.9e-71
Identity = 124/163 (76.07%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           MDLL LS  LFCVL+ FTMLPSSLAQDSPQDYLN HN ARA V V  +QWDE+VA+++RQ
Sbjct: 1   MDLLKLSLSLFCVLS-FTMLPSSLAQDSPQDYLNAHNAARAQVGVGPVQWDERVASFARQ 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120
           YAN R+NDC+L+HS GPYGENIAWG PDLSGT AV++WVNEKQ+Y+Y TN+CA+GKVCGH
Sbjct: 61  YANQRINDCKLIHSGGPYGENIAWGWPDLSGTAAVQMWVNEKQFYNYGTNTCAAGKVCGH 120

Query: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           YTQVVW+ SVR+GCAKVKC N GG FI+CNYDPRGNI+GQ+PY
Sbjct: 121 YTQVVWRKSVRIGCAKVKCTNNGGTFIICNYDPRGNIIGQKPY 162

[Close]

BLAST of Cmc01g0004391.1 vs. NCBI nr
Match: XP_008455064.1 (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa] >TYK06836.1 pathogenesis-related protein PRB1-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 262.3 bits (669), Expect = 2.8e-66
Identity = 115/160 (71.88%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 4   LNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYAN 63
           L+LS  LFCVL  F MLPSSLAQDSP+D++N HN ARA V V  + WDE+VA+++RQYAN
Sbjct: 6   LSLSLSLFCVLT-FIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYAN 65

Query: 64  LRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQ 123
            R+NDCRLVHS GPYGENIAWG PDLSGT AV++WVNEKQ+Y+Y +N+CA+GKVCGHYTQ
Sbjct: 66  QRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQ 125

Query: 124 VVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           VVW+NSVR+GCAKV+C N  G FI+CNY+PRGNI+GQ+PY
Sbjct: 126 VVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004391.1 vs. NCBI nr
Match: XP_022927845.1 (pathogenesis-related protein PRB1-3-like [Cucurbita moschata])

HSP 1 Score: 260.8 bits (665), Expect = 8.0e-66
Identity = 117/163 (71.78%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           MDL  LS  LFCV++   MLPS+LAQD+PQD++N HN ARA V V  +QWD  VA+Y++Q
Sbjct: 1   MDLFKLSLSLFCVVS-VAMLPSALAQDTPQDFVNAHNAARALVGVGPVQWDATVASYAQQ 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120
           YANLR+NDC+L+HS GPYGENIAWGS +LSGT AV+LWV EKQYY+YNTNSCA+GKVCGH
Sbjct: 61  YANLRINDCQLIHSGGPYGENIAWGSSNLSGTAAVQLWVAEKQYYNYNTNSCAAGKVCGH 120

Query: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           YTQVVW+NSVR+GCAKV C N  G FI CNYDPRGNI+GQ PY
Sbjct: 121 YTQVVWRNSVRIGCAKVTCANNAGTFITCNYDPRGNIIGQMPY 162

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.6e-51
Identity = 97/155 (62.58%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 9   ILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMND 68
           I+F  L    +LPS  AQDSPQDYL  HNQAR AV V  +QWDE+VA Y+R YA     +
Sbjct: 11  IVFVALVGALVLPSK-AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 70

Query: 69  CRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVWKN 128
           CRL+HS GPYGEN+AWGS DLSG  AV +WV+EK  Y+Y  N+C    VCGHYTQVVW+ 
Sbjct: 71  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 130

Query: 129 SVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           SVRLGCAKV+C N GG  I CNYDPRGN V ++PY
Sbjct: 131 SVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.5e-51
Identity = 91/157 (57.96%), Postives = 114/157 (72.61%), Query Frame = 0


Query: 9   ILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMND 68
           IL  +     M+  S AQ+SPQDY++ HN ARAAV V  + W  K+  +++ YAN R+ND
Sbjct: 8   ILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRIND 67

Query: 69  CRLVHSNGPYGENIAWGS--PDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVW 128
           C+L HS GPYGENI WGS   D   +DAV  WV+EK+ YDY +N+CA+GKVCGHYTQVVW
Sbjct: 68  CKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVW 127

Query: 129 KNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           + S  +GCA+V C N  GVFI CNY+PRGNIVGQ+PY
Sbjct: 128 RASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-51
Identity = 90/157 (57.32%), Postives = 113/157 (71.97%), Query Frame = 0


Query: 9   ILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMND 68
           IL  +     M+  S AQ+SPQDY++ HN AR+AV V  + W  K+  +++ YAN R+ND
Sbjct: 8   ILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRIND 67

Query: 69  CRLVHSNGPYGENIAWGS--PDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVW 128
           C+L HS GPYGENI WGS   D    DAV  WVNEK+ Y+Y +N+CA+GKVCGHYTQVVW
Sbjct: 68  CKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVW 127

Query: 129 KNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           + S  +GCA+V C N  GVFI CNY+PRGNIVGQ+PY
Sbjct: 128 RASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.9e-51
Identity = 89/157 (56.69%), Postives = 114/157 (72.61%), Query Frame = 0


Query: 9   ILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMND 68
           IL  +     M+  S AQ+SPQDY++ HN AR+AV V  + W  K+  +++ YAN R+ND
Sbjct: 8   ILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRIND 67

Query: 69  CRLVHSNGPYGENIAWGS--PDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVW 128
           C+L HS GPYGENI WGS   D   +DAV  WV+EK+ YDY +N+CA+GKVCGHYTQVVW
Sbjct: 68  CKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVW 127

Query: 129 KNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           + S  +GCA+V C N  GVFI CNY+PRGNI+GQ+PY
Sbjct: 128 RASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-50
Identity = 90/158 (56.96%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 6   LSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLR 65
           L+ I+ C +    ++ SS AQ+SPQDYLN HN AR  V V  + WD ++A Y++ YAN R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  MNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVV 125
           + DC ++HS+GPYGEN+A   P L+   AVK+WV+EK++YDYN+NSC  G VCGHYTQVV
Sbjct: 64  IGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHYTQVV 123

Query: 126 WKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           W+NSVRLGCA+V+  N G  FI CNYDP GN +GQRP+
Sbjct: 124 WRNSVRLGCARVR-SNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy TrEMBL
Match: A0A5A7SMF3 (Pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001390 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 9.8e-94
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120
           YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy TrEMBL
Match: A0A1S3C050 (pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495328 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 9.8e-94
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120
           YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy TrEMBL
Match: A0A0A0K2V9 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070255 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.0e-82
Identity = 144/163 (88.34%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           MDLLNLS ILFCVL+CFTMLPSSLAQDSPQDY+N HN ARAAV V  I+WDEKVANYSR 
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120
           YAN RMNDCRLVHSNGPYGENIAWGSPDLSG +AVKLWV+EKQYY+YN+NSCASGKVCGH
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           YTQVVWKNS+RLGCAKVKC+NKGG FIVCNYDPRGNIVGQRPY
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy TrEMBL
Match: A0A5A7SJR7 (Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001400 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 115/160 (71.88%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 4   LNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYAN 63
           L+LS  LFCVL  F MLPSSLAQDSP+D++N HN ARA V V  + WDE+VA+++RQYAN
Sbjct: 6   LSLSLSLFCVLT-FIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYAN 65

Query: 64  LRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQ 123
            R+NDCRLVHS GPYGENIAWG PDLSGT AV++WVNEKQ+Y+Y +N+CA+GKVCGHYTQ
Sbjct: 66  QRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQ 125

Query: 124 VVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           VVW+NSVR+GCAKV+C N  G FI+CNY+PRGNI+GQ+PY
Sbjct: 126 VVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004391.1 vs. ExPASy TrEMBL
Match: A0A1S3C0R9 (pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 115/160 (71.88%), Postives = 139/160 (86.88%), Query Frame = 0


Query: 4   LNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYAN 63
           L+LS  LFCVL  F MLPSSLAQDSP+D++N HN ARA V V  + WDE+VA+++RQYAN
Sbjct: 6   LSLSLSLFCVLT-FIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYAN 65

Query: 64  LRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQ 123
            R+NDCRLVHS GPYGENIAWG PDLSGT AV++WVNEKQ+Y+Y +N+CA+GKVCGHYTQ
Sbjct: 66  QRINDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQ 125

Query: 124 VVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           VVW+NSVR+GCAKV+C N  G FI+CNY+PRGNI+GQ+PY
Sbjct: 126 VVWRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of Cmc01g0004391.1 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-52
Identity = 97/155 (62.58%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 9   ILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMND 68
           I+F  L    +LPS  AQDSPQDYL  HNQAR AV V  +QWDE+VA Y+R YA     +
Sbjct: 11  IVFVALVGALVLPSK-AQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 70

Query: 69  CRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVWKN 128
           CRL+HS GPYGEN+AWGS DLSG  AV +WV+EK  Y+Y  N+C    VCGHYTQVVW+ 
Sbjct: 71  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWRK 130

Query: 129 SVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           SVRLGCAKV+C N GG  I CNYDPRGN V ++PY
Sbjct: 131 SVRLGCAKVRC-NNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cmc01g0004391.1 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 194.9 bits (494), Expect = 5.0e-50
Identity = 90/139 (64.75%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 25  AQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMNDCRLVHSNGPYGENIAW 84
           AQDS QDY+N HNQAR+ + V  +QWDE +A Y+R YAN    DCRLVHS GPYGEN+A 
Sbjct: 26  AQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAK 85

Query: 85  GSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVWKNSVRLGCAKVKCRNKGG 144
              DLSG  AV LWVNEK  Y+Y+TN+C    VCGHYTQVVW+NSVRLGCAKV+C N GG
Sbjct: 86  SGGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRC-NNGG 145

Query: 145 VFIVCNYDPRGNIVGQRPY 164
             I CNYDP GN   Q+PY
Sbjct: 146 TIISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cmc01g0004391.1 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 6.6e-50
Identity = 95/164 (57.93%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSL-AQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSR 60
           M + N S  LF  +  F +L   L AQDSPQD+L  HN+ARA V V  ++WDEKVA Y+R
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  QYANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCG 120
            YAN R  DC + HS+G YGENIAW S  ++G  AV +WV+E+  YDY++N+CA  K CG
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 HYTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
           HYTQVVW+NS RLGCAKV+C N G  FI CNYDP GN VG+ PY
Sbjct: 121 HYTQVVWRNSERLGCAKVRC-NNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cmc01g0004391.1 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-48
Identity = 88/165 (53.33%), Postives = 115/165 (69.70%), Query Frame = 0


Query: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60
           M LL  + +    +  F     SLA+D  Q +L  HN+AR  V +  + WD++VA Y+  
Sbjct: 1   MSLLKTNILFLLAIALFY---GSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAAS 60

Query: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSC--ASGKVC 120
           YAN R+NDC LVHSNGP+GENIA  S ++S  DA ++W+NEKQYYDY++N+C   +G  C
Sbjct: 61  YANQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTC 120

Query: 121 GHYTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 164
            HYTQVVWKN+VRLGCAKV C N GG FI CNYDP GN +G++P+
Sbjct: 121 LHYTQVVWKNTVRLGCAKVVC-NSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cmc01g0004391.1 vs. TAIR 10
Match: AT4G33710.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 4.1e-44
Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 25  AQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQYANLRMNDCRLVHSN--GPYGENI 84
           AQD  QDYL+ HN AR  V V  I+W    A Y+  YA  R  DCRL+HSN  G YGEN+
Sbjct: 27  AQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYAWNYAQRRKRDCRLIHSNSRGRYGENL 86

Query: 85  AWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGHYTQVVWKNSVRLGCAKVKCRNK 144
           AW S D+SG  AV+LWV EK  Y + +N+C +GK CGHYTQVVWKNS  +GCAKVKC N 
Sbjct: 87  AWSSGDMSGAAAVRLWVREKSDYFHKSNTCRAGKQCGHYTQVVWKNSEWVGCAKVKCDN- 146

Query: 145 GGVFIVCNYDPRGNIVGQRPY 164
           GG F+ CNY   GN+ G+RPY
Sbjct: 147 GGTFVTCNYSHPGNVRGRRPY 166

The following BLAST results are available for this feature:

BLAST of Cmc01g0004391.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455062.1	2.0e-93	100.00	PREDICTED: pathogenesis-related protein 1-like [Cucumis melo] >KAA0031383.1 path...	[more]
XP_004136929.2	6.1e-82	88.34	pathogenesis-related protein 1 [Cucumis sativus] >KGN43833.1 hypothetical protei...	[more]
XP_038887491.1	2.9e-71	76.07	pathogenesis-related protein 1-like [Benincasa hispida]	[more]
XP_008455064.1	2.8e-66	71.88	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo] >KAA0031384.1...	[more]
XP_022927845.1	8.0e-66	71.78	pathogenesis-related protein PRB1-3-like [Cucurbita moschata]	[more]

BLAST of Cmc01g0004391.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33154	2.6e-51	62.58	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1...	[more]
P35793	4.5e-51	57.96	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35792	9.9e-51	57.32	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q05968	9.9e-51	56.69	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P11670	2.9e-50	56.96	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]

BLAST of Cmc01g0004391.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMF3	9.8e-94	100.00	Pathogenesis-related protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C050	9.8e-94	100.00	pathogenesis-related protein 1-like OS=Cucumis melo OX=3656 GN=LOC103495328 PE=4...	[more]
A0A0A0K2V9	3.0e-82	88.34	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070255 PE=4 SV...	[more]
A0A5A7SJR7	1.3e-66	71.88	Pathogenesis-related protein PRB1-2-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C0R9	1.3e-66	71.88	pathogenesis-related protein PRB1-2-like OS=Cucumis melo OX=3656 GN=LOC103495329...	[more]

BLAST of Cmc01g0004391.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14610.1	1.9e-52	62.58	pathogenesis-related gene 1	[more]
AT2G14580.1	5.0e-50	64.75	basic pathogenesis-related protein 1	[more]
AT4G33720.1	6.6e-50	57.93	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT3G19690.1	1.2e-48	53.33	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G33710.1	4.1e-44	58.16	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 47..67
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 22..163
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 29..163 e-value: 2.98295E-87 score: 249.473
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 94..107 score: 45.34 coord: 146..159 score: 56.02 coord: 48..66 score: 27.81 coord: 118..134 score: 63.47
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 22..163
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 27..159 e-value: 1.3E-59 score: 214.1
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 33..151 e-value: 7.6E-21 score: 75.3
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 27..163 e-value: 8.0E-45 score: 154.5
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 20..163
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 146..157
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 119..129

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cmc01g0004391	Cmc01g0004391	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004391.1-exon	Cmc01g0004391.1-exon-CMiso1.1chr01:1022538..1023029	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004391.1-cds	Cmc01g0004391.1-cds-CMiso1.1chr01:1022538..1023029	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cmc01g0004391.1	Cmc01g0004391.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005615	extracellular space