CmaCh19G006360.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh19G006360.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr19: 6792627 .. 6794001 (-)
Sequence length852
RNA-Seq ExpressionCmaCh19G006360.1
SyntenyCmaCh19G006360.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGTTCATTACTCCGGAGAGACCTTAGCTTCAGTGGAAAACCTGCGACGATGTTCTTTGTGTTGTGTTGTCTACCGTATCAATTTTCTGAAGTCATGATCATATATGGAAAGGGTAGCGCTGTCACTACGACCTGCCCGTTGTACACACTGCCTGGAATCGTCAAAAAAATGGAATGGGAAGCTCTGGCAGTTCTTCAAACGTTTTTCCTTTTAGTAATTTGAATTTATTACCTCTGTTTTCTGGGTTGTTTCACTTGGCCCTTCTTTTTACTTATCAAATGGAGCAATGTTTAGAGATGATTTCCTGAAAATGTATATTTTCCTAAGAGTTATACTTAATTGTGCGTGTTTTTGTTCGTCTACCGGTGACCATCTTAGGAAGTCTTTTTGGTCATTGTTCATATACCGTTTCTTATGCTTGTTTCCTTAGCAAAAAGATATATTGTTTTTATAGGTTCATCTTTTTTCACTCAACTTCTCCGACTTCGAGATTGAAAAATGGAGGAAGTAGGTCTGTTTGAATCTAGACCACTTTTAAGAATATATCTAGTCTTCTGGGTCGACCATAAATATGTCATCAGTGCAAGTCTCTAATTTTGTAGCAGAGAGATGCGCTCTAAAATCCATCATTTCATAGTTGGAATGGTCTTCTAATATCTTTAGTTTCTTCTTCAACACAGAAATTATATTCTCTTAGCTTTATATGGATGCTACCTTTTGCAGAGTACTCGAATGTGAATCACGGTGTAAACAGCTACACGTTGTTGCAGATGAAATTTTGTCATCCATTGTTGTTAATTCGGAGACGTTCTGTCGCCATTATAGTTTGTTCTTTTTCTTTTGTTTTCTTCCCCGCCCCAGAATTGATCTAGCAAATAGAGGAAAGTAGAGCTGCAGGCGAAAAAACGCATCAAAGTACTATTTTTGTTCCTTGAAAAAGTAATTTATAGATTCTTGATCTGTGCACAATCTAATGTTAATAAGTGGTGATTTCCTTGGTCGAACTTTCAGACATAGAATGGATGAAAAGCTCTAATGATCTAAATCTTTTGCTGTTCCTCATTTTTAGTTCTTCTACTTTGTGTATGGAAATTTCAGGATAATGACTTGTTTATTAGATTGTATTATGGATTGATCAAAGTGTGTGAAGTTATGTTCAGATGCTGGAAGCAATTCAAGGTGCATAGGTTTACTTTCCTTCCTGAAAATTGAAGAACACTGCGAATGCTGCAAAAGCAGAATGATTTTGAGCTGAAAAACAGCCTTTTCTTTGAACTCTTGAAGAATATGTTTTTCTTGTTAGGTTGAATGGCTCAATGACCTGACCTAGGGTCACGACCTCATGTATTTATAGATGTGTATAATGAAG

mRNA sequence

ATGATCAGTTCATTACTCCGGAGAGACCTTAGCTTCAGTGGAAAACCTGCGACGATGTTCTTTGTGTTGTGTTGTCTACCGTATCAATTTTCTGAAGTCATGATCATATATGGAAAGGGTAGCGCTGTCACTACGACCTGCCCGTTGTACACACTGCCTGGAATCGTCAAAAAAATGGAATGGGAAGCTCTGGCAGTTCTTCAAACAGTACTCGAATGTGAATCACGGTGTAAACAGCTACACGTTGTTGCAGATGAAATTTTGTCATCCATTGTTGTTAATTCGGAGACGTTCTGTCGCCATTATAGTTTGTTCTTTTTCTTTTGTTTTCTTCCCCGCCCCAGAATTGATCTAGCAAATAGAGGAAAGTAGAGCTGCAGGCGAAAAAACGCATCAAAGTACTATTTTTGTTCCTTGAAAAAGTAATTTATAGATTCTTGATCTGTGCACAATCTAATGTTAATAAGTGGTGATTTCCTTGGTCGAACTTTCAGACATAGAATGGATGAAAAGCTCTAATGATCTAAATCTTTTGCTGTTCCTCATTTTTAGTTCTTCTACTTTGTGTATGGAAATTTCAGGATAATGACTTGTTTATTAGATTGTATTATGGATTGATCAAAGTGTGTGAAGTTATGTTCAGATGCTGGAAGCAATTCAAGGTGCATAGGTTTACTTTCCTTCCTGAAAATTGAAGAACACTGCGAATGCTGCAAAAGCAGAATGATTTTGAGCTGAAAAACAGCCTTTTCTTTGAACTCTTGAAGAATATGTTTTTCTTGTTAGGTTGAATGGCTCAATGACCTGACCTAGGGTCACGACCTCATGTATTTATAGATGTGTATAATGAAG

Coding sequence (CDS)

ATGATCAGTTCATTACTCCGGAGAGACCTTAGCTTCAGTGGAAAACCTGCGACGATGTTCTTTGTGTTGTGTTGTCTACCGTATCAATTTTCTGAAGTCATGATCATATATGGAAAGGGTAGCGCTGTCACTACGACCTGCCCGTTGTACACACTGCCTGGAATCGTCAAAAAAATGGAATGGGAAGCTCTGGCAGTTCTTCAAACAGTACTCGAATGTGAATCACGGTGTAAACAGCTACACGTTGTTGCAGATGAAATTTTGTCATCCATTGTTGTTAATTCGGAGACGTTCTGTCGCCATTATAGTTTGTTCTTTTTCTTTTGTTTTCTTCCCCGCCCCAGAATTGATCTAGCAAATAGAGGAAAGTAG

Protein sequence

MISSLLRRDLSFSGKPATMFFVLCCLPYQFSEVMIIYGKGSAVTTTCPLYTLPGIVKKMEWEALAVLQTVLECESRCKQLHVVADEILSSIVVNSETFCRHYSLFFFFCFLPRPRIDLANRGK
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh19G006360.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G006360.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G006360.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh19G006360.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh19G006360CmaCh19G006360gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh19G006360.1:exon:112CmaCh19G006360.1:exon:112exon
CmaCh19G006360.1:exon:111CmaCh19G006360.1:exon:111exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh19G006360.1:three_prime_utrCmaCh19G006360.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh19G006360.1:cdsCmaCh19G006360.1:cds_2CDS
CmaCh19G006360.1:cdsCmaCh19G006360.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh19G006360.1CmaCh19G006360.1-proteinpolypeptide