CmaCh18G013020.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTGGTTTTATTGTATGTTTTAAGGGATGAGATGAGATGAGATGAGATGAGAGGATGATAGAGAAACTTGAGGTTATTTCTTGTCTGCTTCCCTATGCACCCGGCAACTCAATCACCACACTTTTCCCCGTCGTTTTCTCATCTCCGGTCATCTGGCCTCCGCCTCAATTCCGATCCACCCTCCGCTTTCTAACCTCAGATGACACGGACGGACTGCCATTTCGACTCTGTTCCCGATTCTTAACCATGAGCCCTCTTTAGGTTTGAGCTTCTCTTGGTTTCTGCCTCTTTGATCTAGCTCAGCTTAGTTTTTAAAAATGAGTGGTAGCGGTGGATTCAGCAGCTTGGAGAGGGAGTGCATTCGGAGGCATCACAGCCACGAGCCTGCTGAGAATCAGTGCAGCTCCGTGCTCATCAAGCGCATCAAAGCTCCTGTTCCCCTTGTATTATTTCTTTCATTTATCTCTCTCTCTTTTCATATGGTTGTTTCATATGTGAAATTTATGTTCCTTGGGTATGGGTTTTACATGAGCCACATACGTTTTTTCTCTCTCTCATTCTTTGACGTCCATCTTTGTAAATTCTGAAGAGGATAATCCTTGGTGGATCGGACTTTAACTCTTTGTTCGGTGTTTTCAGCCTCAAAATTTGGGCCCTTCAATTTTTTTAGTGCGTTTTCTTTGTCGCAGCGTTTACCAGAGATCTATGGGGTATTTCCATTGGCTTGTTGTTTCGTGTATGAAATATAATAATCAATTCTGTTTAATGCTTATCTCTGTTTCTGCAGAGTACTACACAATAATTGTAAGCATTTAGTTTATTGTTTAGTCTTGTTAAATCACTAAACCCCAAAAAAGAATTGATCTCTTGGGTTAAGAAAAATCTTACCTTTTCAATATATATTCAACACTTTCCTCCCTTCACTTCCTAAATTGTTGCCCATCTCTTTTATCAAAACCTGGCAACCATAGATCTATGTCTTGTTAACTTGTTTTTGTAGTCTGTAGTTGGGTTGTTTGGTCAACTATGTTGCGAAAATTATATTCATACATATATACACAGTCCCAAGTATTCTGCCAATCTTTCTTTGGATATTGGCACTAACTTGGAAGGCTTAGTGGATTATTTACATTTTTCACTTCATTGGACATTAGTACGCATATAAGGTCTCTGGAAATGTGTATGTCAAGGTGAATGACAAGCTTATAATACTCATAATTTAAAAATATGAAATGAAACTTGGAGAAAATCAAAATTTATCGACATGGAAATCAATTTTCTACTACTATAGAACTGCACTATCATATTTTTCGAAATGTGGTTATTTTGAGAGTTCTATAACGTGCATCTGATTTATTTTGCCACATCCACGTTCTAACTTAGTTCTCATCAGGTTTGGTCTTTGGTGAGAAGATTTGACCAGCCCCAAAAATACAAGCCATTTATAAGCAGGTGTGTAGTGCAGGGGAATCTTGAGATCGGAAGTCTCAGAGAAGTTGATGTCAAGTCTGGGCTCCCTGCCACCACAAGCACCGAAAGGTTGGAACTTCTTGATGATGATAAACATATTCTTAGCGTCAGGATAGTTGGTGGTGATCACAGGCTTAGGGTAAGTTTCTCTTTTTCCATTGCCTGATTGTATTTACTTAGATATGGGGTATTGCCACACAAATACTTATTCTCAATTTTAAATTGTTTTCACACATTAGTCGCATTCACAAGTTGCGTTGTCTACCAAATCTTATATAGTTTATAGTTCTAAAAACTCTTCTGGGTGTGGTTAAATTCTGGGGGAATTCTAGAGCGCCTCACAGAGAATAATTTGGTTAACTGATGGATGGATCAAGCTTGGGTAATTGCATGTGTTCTTAACTTCTCCAATTCAATTCTTTGCACATCCTTGATGTATCACTTTACCGGCTTAGGCTATTTTTAATTCAAATCAGACGGACAATCCATTTTCAGGATTGGGGAGGGCATATTCAAGTAGGAATTTGAACATTTGCAGCTACAATGGGAAGGCCTCTCTTATTGAAACTAATCATCACCCTTTGTTTCTCTTGAGATTTCTCGGTAGGACAGGATAGAAGTTGTCTAATGAGATAGGGCACGGTCAAACGTTTATTCGAAGAATACCTTCTGCTGATTATTGGTCCCTATGATGCATAATCCAACCAACTTTCTTCTTCCTTTTCTTTCAGAACTACTCTTCAATAATTTCCCTCCATTCAGAGATCATAGATGGAAGGCCAGGGACTCTTGTGGTTGAGTCATTTGTGGTGGACACTCCTGAAGGAAACACAAAGGATGAGACTTGCTTCGTTGTAGAGACTTTAATCAAATGCAATCTCAAATCTCTTGCTGATGTCTCAGAACGGCTTGCTATTCAGGATTGGACTGAGCCTATGGTTTAAGCGAACTTTAAAGATTGATATGAATGGAGAATGGTGGGGGCAAGATTTGCTGTGATAGTACGCACCAAGACTGGCAGTAGTACTACTCTCATATACACATTTCACACTTGTTCCCTTTGCTGGTTAATTGTCTTTGAATTATAGGCTGCTGTCTTCCGTGGCTGAAGCACCTCATGTCTTTATAAAGGAATTCAACACCCATTCATGAATAAGACGTATAGAAGTTATTCTTCTCTAGTGTCCAGGATTTTGGTTAGGCAGTGTAGGATTTATGGTTGTACACACGAAGAGGCATTATGAGTACACTCGTTAATTATTTTGGTTACTAGTTTCAGACAGTCAAACTGGGACAAACCATATTTGGATTTTAAGTATTGTCTGTTTGTTGGTGGAAATTCTATTTTTCACGTAATGTTGGCCGAGCTTATCACCATGTCCATGTTTGTTAGCTAATCGAGCATCATTTAAGTAACAATCAAGTTGATGGTCGATTTAGAATCGTCTGGTTTATCATCTAAAGTAGACTTATGTTGGGATTATAATTGCCTTGTGAATAAAGTGAGGTGCTGTCATGTCCTTAATTTTTGTAAGAGGCCAAGCTCATTGTTAAAAAATATTATCTACTTTTACCCGTTATGTATTCACAGTTTTAAAACAGGGAGAGGTTTC GGTTTGGTTTTATTGTATGTTTTAAGGGATGAGATGAGATGAGATGAGATGAGAGGATGATAGAGAAACTTGAGGTTATTTCTTGTCTGCTTCCCTATGCACCCGGCAACTCAATCACCACACTTTTCCCCGTCGTTTTCTCATCTCCGGTCATCTGGCCTCCGCCTCAATTCCGATCCACCCTCCGCTTTCTAACCTCAGATGACACGGACGGACTGCCATTTCGACTCTGTTCCCGATTCTTAACCATGAGCCCTCTTTAGGTTTGAGCTTCTCTTGGTTTCTGCCTCTTTGATCTAGCTCAGCTTAGTTTTTAAAAATGAGTGGTAGCGGTGGATTCAGCAGCTTGGAGAGGGAGTGCATTCGGAGGCATCACAGCCACGAGCCTGCTGAGAATCAGTGCAGCTCCGTGCTCATCAAGCGCATCAAAGCTCCTGTTCCCCTTGTTTGGTCTTTGGTGAGAAGATTTGACCAGCCCCAAAAATACAAGCCATTTATAAGCAGGTGTGTAGTGCAGGGGAATCTTGAGATCGGAAGTCTCAGAGAAGTTGATGTCAAGTCTGGGCTCCCTGCCACCACAAGCACCGAAAGGTTGGAACTTCTTGATGATGATAAACATATTCTTAGCGTCAGGATAGTTGGTGGTGATCACAGGCTTAGGAACTACTCTTCAATAATTTCCCTCCATTCAGAGATCATAGATGGAAGGCCAGGGACTCTTGTGGTTGAGTCATTTGTGGTGGACACTCCTGAAGGAAACACAAAGGATGAGACTTGCTTCGTTGTAGAGACTTTAATCAAATGCAATCTCAAATCTCTTGCTGATGTCTCAGAACGGCTTGCTATTCAGGATTGGACTGAGCCTATGGTTTAAGCGAACTTTAAAGATTGATATGAATGGAGAATGGTGGGGGCAAGATTTGCTGTGATAGTACGCACCAAGACTGGCAGTAGTACTACTCTCATATACACATTTCACACTTGTTCCCTTTGCTGGTTAATTGTCTTTGAATTATAGGCTGCTGTCTTCCGTGGCTGAAGCACCTCATGTCTTTATAAAGGAATTCAACACCCATTCATGAATAAGACGTATAGAAGTTATTCTTCTCTAGTGTCCAGGATTTTGGTTAGGCAGTGTAGGATTTATGGTTGTACACACGAAGAGGCATTATGAGTACACTCGTTAATTATTTTGGTTACTAGTTTCAGACAGTCAAACTGGGACAAACCATATTTGGATTTTAAGTATTGTCTGTTTGTTGGTGGAAATTCTATTTTTCACGTAATGTTGGCCGAGCTTATCACCATGTCCATGTTTGTTAGCTAATCGAGCATCATTTAAGTAACAATCAAGTTGATGGTCGATTTAGAATCGTCTGGTTTATCATCTAAAGTAGACTTATGTTGGGATTATAATTGCCTTGTGAATAAAGTGAGGTGCTGTCATGTCCTTAATTTTTGTAAGAGGCCAAGCTCATTGTTAAAAAATATTATCTACTTTTACCCGTTATGTATTCACAGTTTTAAAACAGGGAGAGGTTTC ATGAGTGGTAGCGGTGGATTCAGCAGCTTGGAGAGGGAGTGCATTCGGAGGCATCACAGCCACGAGCCTGCTGAGAATCAGTGCAGCTCCGTGCTCATCAAGCGCATCAAAGCTCCTGTTCCCCTTGTTTGGTCTTTGGTGAGAAGATTTGACCAGCCCCAAAAATACAAGCCATTTATAAGCAGGTGTGTAGTGCAGGGGAATCTTGAGATCGGAAGTCTCAGAGAAGTTGATGTCAAGTCTGGGCTCCCTGCCACCACAAGCACCGAAAGGTTGGAACTTCTTGATGATGATAAACATATTCTTAGCGTCAGGATAGTTGGTGGTGATCACAGGCTTAGGAACTACTCTTCAATAATTTCCCTCCATTCAGAGATCATAGATGGAAGGCCAGGGACTCTTGTGGTTGAGTCATTTGTGGTGGACACTCCTGAAGGAAACACAAAGGATGAGACTTGCTTCGTTGTAGAGACTTTAATCAAATGCAATCTCAAATCTCTTGCTGATGTCTCAGAACGGCTTGCTATTCAGGATTGGACTGAGCCTATGGTTTAA MSGSGGFSSLERECIRRHHSHEPAENQCSSVLIKRIKAPVPLVWSLVRRFDQPQKYKPFISRCVVQGNLEIGSLREVDVKSGLPATTSTERLELLDDDKHILSVRIVGGDHRLRNYSSIISLHSEIIDGRPGTLVVESFVVDTPEGNTKDETCFVVETLIKCNLKSLADVSERLAIQDWTEPMV Homology
BLAST of CmaCh18G013020.1 vs. ExPASy Swiss-Prot
Match: Q9FGM1 (Abscisic acid receptor PYL8 OS=Arabidopsis thaliana OX=3702 GN=PYL8 PE=1 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 6.3e-78 Identity = 140/174 (80.46%), Postives = 156/174 (89.66%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy Swiss-Prot
Match: Q6EN42 (Abscisic acid receptor PYL3 OS=Oryza sativa subsp. japonica OX=39947 GN=PYL3 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 7.2e-74 Identity = 129/173 (74.57%), Postives = 154/173 (89.02%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy Swiss-Prot
Match: Q6I5C3 (Abscisic acid receptor PYL5 OS=Oryza sativa subsp. japonica OX=39947 GN=PYL5 PE=1 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.1e-73 Identity = 133/181 (73.48%), Postives = 158/181 (87.29%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy Swiss-Prot
Match: Q84MC7 (Abscisic acid receptor PYL9 OS=Arabidopsis thaliana OX=3702 GN=PYL9 PE=1 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 7.5e-71 Identity = 128/180 (71.11%), Postives = 154/180 (85.56%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy Swiss-Prot
Match: Q8H1R0 (Abscisic acid receptor PYL10 OS=Arabidopsis thaliana OX=3702 GN=PYL10 PE=1 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 2.7e-68 Identity = 124/166 (74.70%), Postives = 145/166 (87.35%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy TrEMBL
Match: A0A6J1HZ73 (abscisic acid receptor PYL8-like OS=Cucurbita maxima OX=3661 GN=LOC111467559 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.0e-99 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy TrEMBL
Match: A0A6J1G2D8 (abscisic acid receptor PYL8-like OS=Cucurbita moschata OX=3662 GN=LOC111450024 PE=3 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy TrEMBL
Match: A0A5A7UA38 (Abscisic acid receptor PYL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00680 PE=3 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95 Identity = 175/184 (95.11%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy TrEMBL
Match: A0A1S3CP55 (abscisic acid receptor PYL8-like OS=Cucumis melo OX=3656 GN=LOC103503013 PE=3 SV=1) HSP 1 Score: 359.0 bits (920), Expect = 1.2e-95 Identity = 175/184 (95.11%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. ExPASy TrEMBL
Match: A0A0A0L798 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G354490 PE=3 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94 Identity = 173/184 (94.02%), Postives = 180/184 (97.83%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. NCBI nr
Match: XP_022968279.1 (abscisic acid receptor PYL8-like [Cucurbita maxima]) HSP 1 Score: 372.5 bits (955), Expect = 2.1e-99 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. NCBI nr
Match: XP_022945930.1 (abscisic acid receptor PYL8-like [Cucurbita moschata] >XP_023542329.1 abscisic acid receptor PYL8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.1 bits (954), Expect = 2.8e-99 Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. NCBI nr
Match: KAG6574229.1 (Abscisic acid receptor PYL8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013297.1 Abscisic acid receptor PYL8 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 370.9 bits (951), Expect = 6.2e-99 Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. NCBI nr
Match: XP_038898095.1 (abscisic acid receptor PYL8-like isoform X1 [Benincasa hispida]) HSP 1 Score: 361.3 bits (926), Expect = 4.9e-96 Identity = 177/184 (96.20%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. NCBI nr
Match: XP_008465378.1 (PREDICTED: abscisic acid receptor PYL8-like [Cucumis melo] >KAA0050455.1 abscisic acid receptor PYL8-like [Cucumis melo var. makuwa]) HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95 Identity = 175/184 (95.11%), Postives = 181/184 (98.37%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. TAIR 10
Match: AT5G53160.2 (regulatory components of ABA receptor 3 ) HSP 1 Score: 291.6 bits (745), Expect = 4.5e-79 Identity = 140/174 (80.46%), Postives = 156/174 (89.66%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. TAIR 10
Match: AT1G01360.1 (regulatory component of ABA receptor 1 ) HSP 1 Score: 268.1 bits (684), Expect = 5.3e-72 Identity = 128/180 (71.11%), Postives = 154/180 (85.56%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. TAIR 10
Match: AT4G27920.1 (PYR1-like 10 ) HSP 1 Score: 259.6 bits (662), Expect = 1.9e-69 Identity = 124/166 (74.70%), Postives = 145/166 (87.35%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. TAIR 10
Match: AT4G01026.1 (PYR1-like 7 ) HSP 1 Score: 257.3 bits (656), Expect = 9.4e-69 Identity = 123/168 (73.21%), Postives = 145/168 (86.31%), Query Frame = 0
BLAST of CmaCh18G013020.1 vs. TAIR 10
Match: AT2G38310.1 (PYR1-like 4 ) HSP 1 Score: 186.0 bits (471), Expect = 2.6e-47 Identity = 92/174 (52.87%), Postives = 122/174 (70.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|