CmaCh18G010280.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G010280.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ubiquitin receptor RAD23
Location	Cma_Chr18: 8562492 .. 8569422 (+)
Sequence length	1993
RNA-Seq Expression	CmaCh18G010280.1
Synteny	CmaCh18G010280.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTTTGCTTGCGCTTTCGGTTACCGTCGTTCGGAGGCTTTGCTCGCTCTAGGGTACTAGCATAATTCTCTCGAATCCGGCGTACGACGTGCTGCTGTGGTCTTGCATCTCTGCGAAGGCCGCGATCGAGTTCTGAAGATGAAGATTTTCGTCAAGACTCTCAAGGGCTCACACTTCGAAATCGAAGTGCAGCCTCAAGATATGGTTAGTTTACTTTCTTTATCGGTTTTAGTTTCGTTTCTCGTTTTAATCGTTTGCATTAAGACTGTGACTTGGAATCGAGGACTCTCAACTATGTTTTGGATTCCGGTGTGTGTTTGTTACTTCCAATTGATTAGTTATTAGGGTTTATGCGGTGGTAGTTCGTTGTTTTCCTTTTTGTATTGCTGTTTTTTGTACGATTAAATTGTGTTGTGATTTGGAAATTTCATATTGTTCATCGTTGTTATTGCACTAATTCTGTACTCGATTTGTGTTTCGTTTGATCTTTTCTTTTCTCTGTAGTAAAGCATCAAGTAGTTTTTCTCGTCATTTGTAGCTACAGGAGGTTTCGATTGTTGTGCTTTGTCATTAGTATTAAGTTGCATAGTTGATGTAGGACTTTCTTGCCCGCTAATTCAATCTTATATCTAACTTCACGACTGATGTCATCGTTTGCGCTGTGGACTTAGACCACAAGTGATCTCGTTGCTTGCATTTTGTATATGATATATTAAATTAAAAACAATAAGAAAGACAAAGAAGGTAGGTTTAATATTGATTGATTGAATAAATACAGAAGATAAACGTTGTATGGATAAGAATAATCTCATTAGTAATCGCTAATTTGAGCTTTTTCATTTAATGCACCTTCGGTGATTAAGAGTGTTTAACTCCTTTTATTTCATTTATTGATGAAATTATGTGCTCGAGCAATATAGTATCCTACTGTAGTTTTCCCTTAAACTGATCCTTTCAGTTTTACCATGTGAGGTAATGCAATTCCCACAATAGAATTTTGGCAAACCTTAGCACTTCTTGCTAAGCACTTGCATCTTATCTATCACATTTTCTCCCGACTTATCTCCATTTTTATTTCTCGTGGATCTACTTAATATTTGCAGAATCCCTGTTCTGCAAACGTCCTTGAGGCTAAAAGTGAAATTCTCTTTGTACTTGAACCAAAACTATCAACTGTCGTTTACATCAAACAGTCTTTTAAATGAGGAGTTTTCTTTGTAATTTGGGTTTTGTCAAACCGTCTTTATTCAACCTGCTCCCTAGTGTCAAGCTTAGTTGGGGTTTACATGTTAGATTTGTATGGAAGTCACGACAACCTTGGTGATCACTAGTATGATCCAAATTTCACCCAGGACTGCTCTTCCTTGTACCGGAAGATAGTTTTTACTCCTCTGTCATTTATGCTTTCTTCCATCATTCCTAATTTTATGGGCTTAAGCACTTAGACCTGTGCTCTAATCTTGTGTTCAAACCAATTCCCATCTCCAAGGTGCCTTTTAATACCACATGAATAGTAACTTTTCTGGAAGCAGCTTGGTATTCTAATTTCTATCAACAGTCTCTTGAGGATGCTGTCATGTCTGAATCTATTTTAATGAGCTGCTAATTTGTAAGTAAACACTGCCTTGAAAGAGTAGTTCTCTCATATCCACATTTGTCAATTCATATTACTTCCACTCCCCCCAATGATTTCTGAAAGAACATATGCCAGTCTCATTATCGTGGTTGTGGCTCTTGATATTGGCTTTGTCTTGCTTGAAGCAAGCACTGGAAGAATTATGTCCAGGTGAATTAAGGAAAGGAACTGTGCCTATTTCAGTCTTGTTACTTGTTGCCAATCCCATTAGGTTTTAGTCCATCTCACAAGGAAATTGCCAATTTTGAGTGGTCATTTTGTTGTATTCGCTGCCCGAATGGTGGTTGAAGACCTTGTCCATATTCTTTGGAGCTGTGACTTTGCTTGGTGTTTTGTGTTCTTATTTTTAGGTGGTTGACTTGCAGTTTTCTAGACACAAATGCCTTTTGGATATAATCGAAGAGTTTTTCCCTCATTGCCATTACGAATACCCTTGTGTCACCTGTTCAAATCAAGAGAAGGGAATGTTTTTGTGATGGCAAGGATTCGCACGGTTTTGTGTGGCTTGTCCGGGAGAGAAACAAAATTGACCTATAGGGGACTTGAGAGGGACCCTTGTCCCTTTTCCTAAAGGGGTTTCCTCTTTTGTGGGATTGGTCTTTTGGATGCCATTATATTCCTTGAAAGATTGGTTATTCATCAAGAAAAATCTAAATAGATTTGCTGGCCCTTAATTTGTTTTCCTTTCTCTTTTAAAAGTCTTAAAAGGCTTGGTATTGCTGCTGCATTAATTATGCTGCTTGCTGGCACCAAACATCTATGAAGCAGAGAGAGTACATAAGCTGCATTCTGGAAATCTTCATATAAATAGTTGATCATTGTTGTATGTAGACATTTACTGCACAATTTTACAAGTGCAATTTGTCTATGGTACCTTCGGTAAATTTTGTAAACACATGGTCGTATCTTATTTTGTTATATTTTTTTGAACTGTTTTGCCACCATGTTTTCCTTTTGCCTTTTTGAATGTTACATTAACTGAGTTTTGTTGGTTTTAGGTTGCTGATGTGAAGAAAAAAATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCACAGCAGATGCTTATCCATCAGGGAAAAGTCCTTAAAGATGGCACAACACTGGATGAAAATAAAGTTGCAGAAAATAGTTTTATTGTAATCATGTTAACAAAGGTAATGCAGCTAATTTATTTTTTTAATTGAAAGGATTGTGTAAATAACAAATTCTAGGGAGATGAGAGATTGAAATTTATATTATTACAAAATACTAATAATAATAAGTTTGATTCCATGTTTAAACAAAAATAAATATTGAGTGAGTAAAAATATTAGATTACCACGTGCCACAATTTCAAAAATTCATCATGAAAGCCTTTAACTTCTGGGCTTTACTTTAGTGGAGGTTATACGCTAATAAACCAGACAAGAGTTATATAGATTACTCAACCATGTTGGAGACTGGAATTGAACCTGGCTATGCTTTTTTGTCCTCATTTGTGGATGGCTATAACAAGTGCTCTTGATTGTTAAGGATGAACTATATACCTAAAGGGGAAATATATATTTTTGGATGTGCTTCTCCACTCTAACAGCTTTGCCACAAAATACTCATTTTTAAGCTAGAAAAATGTAAAGAGACATGCAACTTTGGTTGGATGAAGAAATTTTGTTAGGAAAATTGTTGGGCATTCTATTCTTATCTGGACGAGGTGATCTTTACAGTTGCTTGATGTTGGTGGAGGTGATCTTCCACCCTTCCTTTTGGGATGGCGCTCTCCTTTGAGCGTCTGATTCCAAGGATGTAATGATTTTTGTTATTATTTCTTAGATTTGATTCTCCAGGATTGGATCTCTTTGGCATTCCCTTTGTTGGGTTGTTTCTTTGTTTTCCCTTTTGTGATCTTTCATTTTTTTCCAATGAAATCTGGTTTTTCATTCAAAAGAAGAAAGGAAAAGAAAAGGAAAAAATGTTCGGAAACATGTGGTATTTATTACTTACCTAGTGTTATACGTAGGTAAGATTATGTTCTACTTCAATAGATTGATGGAATGTCTTGCAAACGCTGTCTATTACATTGCTCTGATAGGGAGGCTTGCAATTTGTAGTCTTGAGCTCAGGCTGGGAAGTGTCAGCACTAGGACGGAAGAGAGTTTCTGCTTGCTTTTATATTTGGTTGTTATGACGTTTTGTAGCATTGTTCCTGTTGTTTGCACTTGGATTTGATTGAAGTGTGAACCCTTTTGATTTTCTTTTTTACCGTTTGTTTTGCTCAAATAGTCCTTTTTTTTTTTTTTTTTTTAATCTTTTTGTTTGTAGAATAAAAGTTCATCGGGTGGGACGTCTTCTACCACACAAGCTGCACCAGTGTCAAAGGTAAGTTATAATAATTCTATGTTTTTTTTTACTGACCAGTGGTAATGGCGATGATAGTCTCAGTGTGTCTCTGAATGCCTTAAATGTTGTAATTCACTTCTGTCCAATAAATTCTTTGTTGTATGTATTTATTTGTCACCTAATAGTTATTACCTGTCTCTGTAGGCAGATGTTTTTCTAAAAAAGTTCCATGTTTATTGCTTAAATAGTAGAGTCCTTAATCTGTCTTCAAGTACTTATATTATTTATGGACATTATGATACAGTTCTACATGTGATCATCTCCAAATGATCATATACAAACGTGGCATGATGTTTGATGCTCTGTTGCCAACCCTTCGGAGTTGGTGCAGTGTTCTTCAATAGTGATTATTTACTTATTCCCATAAAATACTGTTAGTTATCTACCCATATTCCTGATCGAGACGTAATTAAAGAAAAAAATATAGATATAGTATGACAAGGAGGACCTCCTTGCAGGCACCACAGAACACTGCCCCTGCACCTGCTGCAACTCCAGTCTCAACATCTGAAGTTCCTCTGCCAACTTCTGCACCGTGAGTTCAGATCTATCTGCTATGTCTTTCACTATATCTGTCCAGAATAATTGTTCTTGGAGCATTTATGATTACGACAATGATCTTTATTTCAGTCCGGCTACTATTACCACCTCTTCTCTTCCAGCTCCCGCTCCAGCGCCAGCTCAGGCACCTGCAACCACTGTCTTGTTAGTAGTTCTTCCTTCCCGTTCTACCTTTTTTATTCAATGCAAAGGTTTATTCGCTCTTTATTTTCAGACTTAGTTTTCTGAATTTCCTTTATTGTACTTCATGAAAAACAGGCCAGAATCTGATGTCTACAGCCAAGCAGCTTCTAACCTGGTCGCGGGCAGTAACTTGGAGGAGACTATCCAACAGATTCTTCTCATGGGCGGAGGGATTTGGGATAGGGACACTGTTGTTCAAGCTCTTCGTGCTGCTTACAATAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGTAAGTCTATTTGCAGATGTCTATATTTTTTCCATTCTATTGTTATTTTTTAGGTTTTCCTTCACATTCAGAGAATGAAATTATTAATGGCTATACTTTTATCTCTGCAAGGTCAATTGTTTAGAATGGCATTATTTGAACAAAATTATCTCCTGTAGGGCATACCTGAACAAGTTGAAGTTCCACCTGCTGCTCATGTTCCGTCTACTGTTCCAGTGACCAACCCTTCCGCTCAACCTGCACAGCCTGCCCAACCTGCGTCTGCGACAGCCACTGGTCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGTAGGGAAAGAAAAATTAATCAACTTATAGGGTCAGTTGCAATTATTGGTAGAAAGAAGAATAGTGAGCAATGTTATATATGGGTTTTCAAATTTGCAAGTTTATGATTTTTTCTTTTGTCCCCCTTTTTATTTCAGGGTGTACCTAATTTAGCTTCCGGAGCCGTTAGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGGTCCTTCTCTCTCCTTCTCCCTCTCTCCACATACAAACGGACACGTTCACATCATGTATTGCCCACCTCTGAGAATTTGTTCTTTCTCATCTCAGTTCCAAGCTTTGCGAGCTATGGTGCGAGCTAACCCTCAGATACTCCAGGTTTTTCATCTAGTACACTTGATACTTGTTTTTTTTTTTTAATAAAAAAAAGCAAGGTGCCATATGTTGTCATTTTATACAAGTTTTGTTTTCCTTGATTTTGTTTCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTTATTAGACTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCTCTTGAAGGAGAAGGGTAAATTTCTGTTCCCCACATCTCAATTTGAAACAATGGTGGAAGTTTATGTATTAATAATTTAAAGCTTGTTCAGGAATGTACTTGGGCAGCTTGCTGATGCTATGCCGCAGGCTATAACTGTAACCCCAGAGGAACGGGAAGCCATTCAACGGGTTAGTTCACCTTCTCTATTATCTTATGATGATAAAGACAACTGAATTCATCTTGATTCTTAAATTGATATTTTGGATAATTGTCTTTCCCTCCCCAACAGCTTGAGGATTTAGGTTTCGACAGAGCTCTAGTGGTGGAGGTTTTCTTCGCCTGCAACAAGAACGAGGAAATGGCTGCGAACTACCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAATTAGTCCATTCTCTTTTCGTTGTGCCCATTTTAAGAAACCCCCAAAAAGGAAAGGAAAAAGAAATGACGGCCAATCCAACAAGAAAACAAAAAGGAAAGAATCTGTGTATTTATCCGTTGTGCTCCCCCCTCGGGTCTCTGTCTCTCTCTCTTTTCGCCTCTGGCCACATTGTGAATGGTGCTTGTTGTGAACATATAGATGTGAAGATGCATTTTATCCTTTTCAATTTTAATTCGCAACTCAATACTTCGAGCCTGCCATCCGTTCATGTTATATATACCGTCCGTTCATTTTATTCGTTGTTTTCAACTACTTTTTCTACGTCCTTTCTGTGTCTTTTATTTGTTGAGTGATGTTGCCTTAGACACCAAATGATTTTTCATGCAAAGTTTGGAATGCTGACAATCGTCGAAGTGCTTCTTTTATATAATGTTAACCGCTTTATTACTCTGTTGATGTAATGTATAAGTTTCATTAATGCTTTTAGATATTGTTTTCAACCTACGCCATCTGCATGCACTATTTGATCTTTGATTTGTTCTTTTAGGGGCTGTTTGAGGGCCAGAGTGGGAGTTATAGAGCTTGAAATTCTATATTTGGAACAGGAAGTCTCTGTTTTGAGCGCAGAGTTTAAACATAGAAATTTGCAGTTAGG

mRNA sequence

CTCTCTTTGCTTGCGCTTTCGGTTACCGTCGTTCGGAGGCTTTGCTCGCTCTAGGGTACTAGCATAATTCTCTCGAATCCGGCGTACGACGTGCTGCTGTGGTCTTGCATCTCTGCGAAGGCCGCGATCGAGTTCTGAAGATGAAGATTTTCGTCAAGACTCTCAAGGGCTCACACTTCGAAATCGAAGTGCAGCCTCAAGATATGGTTGCTGATGTGAAGAAAAAAATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCACAGCAGATGCTTATCCATCAGGGAAAAGTCCTTAAAGATGGCACAACACTGGATGAAAATAAAGTTGCAGAAAATAGTTTTATTGTAATCATGTTAACAAAGAATAAAAGTTCATCGGGTGGGACGTCTTCTACCACACAAGCTGCACCAGTGTCAAAGGCACCACAGAACACTGCCCCTGCACCTGCTGCAACTCCAGTCTCAACATCTGAAGTTCCTCTGCCAACTTCTGCACCTCCGGCTACTATTACCACCTCTTCTCTTCCAGCTCCCGCTCCAGCGCCAGCTCAGGCACCTGCAACCACTGTCTTGCCAGAATCTGATGTCTACAGCCAAGCAGCTTCTAACCTGGTCGCGGGCAGTAACTTGGAGGAGACTATCCAACAGATTCTTCTCATGGGCGGAGGGATTTGGGATAGGGACACTGTTGTTCAAGCTCTTCGTGCTGCTTACAATAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGGCATACCTGAACAAGTTGAAGTTCCACCTGCTGCTCATGTTCCGTCTACTGTTCCAGTGACCAACCCTTCCGCTCAACCTGCACAGCCTGCCCAACCTGCGTCTGCGACAGCCACTGGTCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGGTGTACCTAATTTAGCTTCCGGAGCCGTTAGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGTTCCAAGCTTTGCGAGCTATGGTGCGAGCTAACCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTTATTAGACTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCTCTTGAAGGAGAAGGGAATGTACTTGGGCAGCTTGCTGATGCTATGCCGCAGGCTATAACTGTAACCCCAGAGGAACGGGAAGCCATTCAACGGCTTGAGGATTTAGGTTTCGACAGAGCTCTAGTGGTGGAGGTTTTCTTCGCCTGCAACAAGAACGAGGAAATGGCTGCGAACTACCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAATTAGTCCATTCTCTTTTCGTTGTGCCCATTTTAAGAAACCCCCAAAAAGGAAAGGAAAAAGAAATGACGGCCAATCCAACAAGAAAACAAAAAGGAAAGAATCTGTGTATTTATCCGTTGTGCTCCCCCCTCGGGTCTCTGTCTCTCTCTCTTTTCGCCTCTGGCCACATTGTGAATGGTGCTTGTTGTGAACATATAGATGTGAAGATGCATTTTATCCTTTTCAATTTTAATTCGCAACTCAATACTTCGAGCCTGCCATCCGTTCATGTTATATATACCGTCCGTTCATTTTATTCGTTGTTTTCAACTACTTTTTCTACGTCCTTTCTGTGTCTTTTATTTGTTGAGTGATGTTGCCTTAGACACCAAATGATTTTTCATGCAAAGTTTGGAATGCTGACAATCGTCGAAGTGCTTCTTTTATATAATGTTAACCGCTTTATTACTCTGTTGATGTAATGTATAAGTTTCATTAATGCTTTTAGATATTGTTTTCAACCTACGCCATCTGCATGCACTATTTGATCTTTGATTTGTTCTTTTAGGGGCTGTTTGAGGGCCAGAGTGGGAGTTATAGAGCTTGAAATTCTATATTTGGAACAGGAAGTCTCTGTTTTGAGCGCAGAGTTTAAACATAGAAATTTGCAGTTAGG

Coding sequence (CDS)

ATGAAGATTTTCGTCAAGACTCTCAAGGGCTCACACTTCGAAATCGAAGTGCAGCCTCAAGATATGGTTGCTGATGTGAAGAAAAAAATAGAAACTGTTCAGGGTGCTGATGTTTACCCTGCTGCACAGCAGATGCTTATCCATCAGGGAAAAGTCCTTAAAGATGGCACAACACTGGATGAAAATAAAGTTGCAGAAAATAGTTTTATTGTAATCATGTTAACAAAGAATAAAAGTTCATCGGGTGGGACGTCTTCTACCACACAAGCTGCACCAGTGTCAAAGGCACCACAGAACACTGCCCCTGCACCTGCTGCAACTCCAGTCTCAACATCTGAAGTTCCTCTGCCAACTTCTGCACCTCCGGCTACTATTACCACCTCTTCTCTTCCAGCTCCCGCTCCAGCGCCAGCTCAGGCACCTGCAACCACTGTCTTGCCAGAATCTGATGTCTACAGCCAAGCAGCTTCTAACCTGGTCGCGGGCAGTAACTTGGAGGAGACTATCCAACAGATTCTTCTCATGGGCGGAGGGATTTGGGATAGGGACACTGTTGTTCAAGCTCTTCGTGCTGCTTACAATAATCCAGAAAGGGCTGTTGATTACCTTTATTCTGGCATACCTGAACAAGTTGAAGTTCCACCTGCTGCTCATGTTCCGTCTACTGTTCCAGTGACCAACCCTTCCGCTCAACCTGCACAGCCTGCCCAACCTGCGTCTGCGACAGCCACTGGTCCAAATGCTAATCCATTAGATCTCTTTCCTCAGGGTGTACCTAATTTAGCTTCCGGAGCCGTTAGTTCCGGCAGTCTTGATTTTCTACGAAATAGTCCTCAGTTCCAAGCTTTGCGAGCTATGGTGCGAGCTAACCCTCAGATACTCCAGCCTATGCTTCAAGAGTTGGGTAAACAAAATCCTCAGCTTATTAGACTTATTCAAGATCATCAACCTGACTTCCTCCGCTTGATTAATGAGCCTCTTGAAGGAGAAGGGAATGTACTTGGGCAGCTTGCTGATGCTATGCCGCAGGCTATAACTGTAACCCCAGAGGAACGGGAAGCCATTCAACGGCTTGAGGATTTAGGTTTCGACAGAGCTCTAGTGGTGGAGGTTTTCTTCGCCTGCAACAAGAACGAGGAAATGGCTGCGAACTACCTTTTAGATCATATTCACGAATTTGAGGGTAATCAGAATTAA

Protein sequence

MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLDENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSAPPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN

Homology

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BLAST of CmaCh18G010280.1 vs. ExPASy Swiss-Prot
Match: Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)

HSP 1 Score: 481.1 bits (1237), Expect = 1.2e-134
Identity = 269/395 (68.10%), Postives = 311/395 (78.73%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEIEV+P D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S  G S+ +  AP +  PQ  A    + P  T+ VP+PTS 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAP--TASVPVPTS- 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
                          A A APAT    ++DVY QAASNLVAG+ LE T+QQIL MGGG W
Sbjct: 121 -------------GTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPST-VPVTNPSAQPAQPAQPA 240
           DRDTVV+ALRAA+NNPERAV+YLYSGIP Q E+PP A  P+T     NP AQP Q A PA
Sbjct: 181 DRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPA 240

Query: 241 SATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQ 300
           +AT  GPNANPL+LFPQG+P   +GA  +G+LDFLRNS QFQALRAMV+ANPQILQPMLQ
Sbjct: 241 AATG-GPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQILQPMLQ 300

Query: 301 ELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLE 360
           ELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE NV+ QL  AMPQA+TVTPEEREAI+RLE
Sbjct: 301 ELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLE 360

Query: 361 DLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 395
            +GFDRA+V+EVFFACNKNEE+AANYLLDH+HEFE
Sbjct: 361 GMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFE 376

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BLAST of CmaCh18G010280.1 vs. ExPASy Swiss-Prot
Match: Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)

HSP 1 Score: 479.9 bits (1234), Expect = 2.7e-134
Identity = 276/421 (65.56%), Postives = 320/421 (76.01%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEIEV+P+D V DVKK IE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNK-------SSSGGTSSTTQAAPVSKAPQNT--APAPAATPVST 120
           ENKVAENSFIVIM+ K+K       S+S GTS      P +  P  +   PA  + PV+ 
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 S------EVPLPTSAPPATITTSSLPAPAPAPAQAPATTVLPES-------DVYSQAASN 180
           +        P PT AP A   T + P P P PA   ++T  P+S       DVY QAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAH 240
           L AGSNLE TIQQIL MGGG WDR+TVV ALRAA+NNPERAV+YLY+GIPEQ EVPP A 
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVAR 240

Query: 241 VPSTVPVTNPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSP 300
            P++     P+  PAQ  QPA+A A+GPNANPLDLFPQG+PN+  G   +G+LDFLRNS 
Sbjct: 241 PPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFLRNSQ 300

Query: 301 QFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EGNVLG 360
           QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    GN+LG
Sbjct: 301 QFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLG 360

Query: 361 QLADAM--PQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEF 395
           Q+A  M  PQAI VT EEREAI+RLE +GF+RALV+EVFFACNKNEE+AANYLLDH+HEF
Sbjct: 361 QMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEF 418

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BLAST of CmaCh18G010280.1 vs. ExPASy Swiss-Prot
Match: Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)

HSP 1 Score: 415.6 bits (1067), Expect = 6.3e-115
Identity = 240/400 (60.00%), Postives = 293/400 (73.25%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKI VKTLKGS F+IEV     VADVK+ IET QG  +YPA QQMLIHQGKVLKD TTLD
Sbjct: 1   MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVS-TSEVPLPTS 120
           ENKV ENSF+VIML + K SS    +T      SKAP N AP     P +  S+ P+   
Sbjct: 61  ENKVLENSFLVIMLRQGKGSSSSAPAT------SKAPSNQAPPTQTVPAAPASQAPV--- 120

Query: 121 APPATI-TTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGG 180
           AP  T+  T S P P    + APA  V  E+D Y QA SNLVAGSNLE TIQ IL MGGG
Sbjct: 121 APATTVPVTVSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGG 180

Query: 181 IWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNP--SAQPAQPA 240
           IWDRD V+ AL AA+NNPERAV+YLYSG+PEQ+++P     P ++   NP  ++Q  QPA
Sbjct: 181 IWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVP---PPSIQPANPTQASQATQPA 240

Query: 241 QPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQP 300
            P S  ++GPNA+PLDLFPQ +PN ++ A   G+LD LRN+ QF+ L ++V+ANPQILQP
Sbjct: 241 AP-SILSSGPNASPLDLFPQALPNASTDAAGLGNLDALRNNAQFRTLLSLVQANPQILQP 300

Query: 301 MLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG--EGNVLGQLADAMPQAITVTPEEREA 360
           +LQELGKQNPQ+++LIQ++Q +FL LINEP EG  E N+L Q  +AMPQ I VTPEE EA
Sbjct: 301 LLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEA 360

Query: 361 IQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 395
           I RLE +GFDRALV++VFFACNK+E++AANYLLDH++EF+
Sbjct: 361 ILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFD 387

[Close]

BLAST of CmaCh18G010280.1 vs. ExPASy Swiss-Prot
Match: Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-100
Identity = 221/398 (55.53%), Postives = 273/398 (68.59%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P D +  VKK IE  QG D YP  QQ+LIH GKVLKD T+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV E  F+V+ML+K+KS      ++ Q + VS+            PVS +     ++ 
Sbjct: 61  ENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQ------------PVSAT---TSSTK 120

Query: 121 PPATITTSSLPAPA-PAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGI 180
           P A  TT S P PA P PAQ        ++D Y QAAS LV+GS+LE+ +QQI+ MGGG 
Sbjct: 121 PAAPSTTQSSPVPASPIPAQEQPAA---QTDTYGQAASTLVSGSSLEQMVQQIMEMGGGS 180

Query: 181 WDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPA 240
           WD++TV +ALRAAYNNPERAVDYLYSGIP+  EV     VP  VP    +   A P  PA
Sbjct: 181 WDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVA----VP--VPEAQIAGSGAAPVAPA 240

Query: 241 SATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQ 300
           S    GPN++PLDLFPQ     A+G+   G+L+FLRN+ QFQ LR MV +NPQILQPMLQ
Sbjct: 241 SG---GPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQ 300

Query: 301 ELGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNVLGQLADAMPQAITVTPEEREAIQ 360
           ELGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  Q    MP AI VTP E+EAIQ
Sbjct: 301 ELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQ 360

Query: 361 RLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 395
           RLE +GFDRALV+E F AC++NEE+AANYLL++  +FE
Sbjct: 361 RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 370

[Close]

BLAST of CmaCh18G010280.1 vs. ExPASy Swiss-Prot
Match: Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)

HSP 1 Score: 359.4 bits (921), Expect = 5.3e-98
Identity = 208/397 (52.39%), Postives = 269/397 (67.76%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P D +  VKK IE  Q  D YP  QQ+LIH GKVLKD TTL 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV E  F+V+ML+K+K++S    S+TQ                 T  +TS +   T A
Sbjct: 61  ENKVTEEGFLVVMLSKSKTASSAGPSSTQ----------------PTSTTTSTISSTTLA 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
            P+T  + ++PA    P Q   T    +SD Y QAAS LV+GS++E+ +QQI+ MGGG W
Sbjct: 121 APSTTQSIAVPASNSTPVQEQPTA---QSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240
           D++TV +ALRAAYNNPERAVDYLYSGIPE V          T+P TN S   +     A 
Sbjct: 181 DKETVTRALRAAYNNPERAVDYLYSGIPETV----------TIPATNLSGVGSGRELTAP 240

Query: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300
             + GPN++PLDLFPQ   + A+G    G+L+FLR + QFQ LR+MV +NPQILQPMLQE
Sbjct: 241 PPSGGPNSSPLDLFPQEAVSDAAGG-DLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQE 300

Query: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNVLGQLADAMPQAITVTPEEREAIQR 360
           LGKQNPQL+RLIQ++Q +FL+L+NEP E   G+ ++  Q    MP ++ VTPEE+E+I+R
Sbjct: 301 LGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIER 360

Query: 361 LEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 395
           LE +GFDRA+V+E F +C++NEE+AANYLL+H  +FE
Sbjct: 361 LEAMGFDRAIVIEAFLSCDRNEELAANYLLEHSADFE 367

[Close]

BLAST of CmaCh18G010280.1 vs. ExPASy TrEMBL
Match: A0A6J1HT74 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111467562 PE=3 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 1.2e-212
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
           PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW
Sbjct: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240
           DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS
Sbjct: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240

Query: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300
           ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE
Sbjct: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300

Query: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360
           LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED
Sbjct: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360

Query: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 398

[Close]

BLAST of CmaCh18G010280.1 vs. ExPASy TrEMBL
Match: A0A6J1G0K5 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1)

HSP 1 Score: 745.3 bits (1923), Expect = 1.3e-211
Identity = 396/398 (99.50%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQPQDMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
           PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW
Sbjct: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240
           DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS
Sbjct: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240

Query: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300
           AT TGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE
Sbjct: 241 ATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300

Query: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360
           LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED
Sbjct: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360

Query: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 398

[Close]

BLAST of CmaCh18G010280.1 vs. ExPASy TrEMBL
Match: A0A6J1G0H9 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1)

HSP 1 Score: 735.7 bits (1898), Expect = 1.0e-208
Identity = 396/412 (96.12%), Postives = 396/412 (96.12%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQPQDMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLP--------------APAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE 180
           PPATITTSSLP              APAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE
Sbjct: 121 PPATITTSSLPAPAPAQAPAPAPAQAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE 180

Query: 181 ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT 240
           ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT
Sbjct: 181 ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT 240

Query: 241 NPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM 300
           NPSAQPAQPAQPASAT TGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM
Sbjct: 241 NPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM 300

Query: 301 VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT 360
           VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT
Sbjct: 301 VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT 360

Query: 361 VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 412

[Close]

BLAST of CmaCh18G010280.1 vs. ExPASy TrEMBL
Match: A0A6J1IZ65 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111479749 PE=3 SV=1)

HSP 1 Score: 694.1 bits (1790), Expect = 3.4e-196
Identity = 373/409 (91.20%), Postives = 385/409 (94.13%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQP+DMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+ENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLP-----APAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLM 180
           PPAT+T SS P     APAPAPA  PAT VL ESDVYSQAASNLVAGSNLE+TIQQILLM
Sbjct: 121 PPATVTDSSPPAPPALAPAPAPATVPATPVLAESDVYSQAASNLVAGSNLEDTIQQILLM 180

Query: 181 GGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPS------ 240
           GGGIWDRDTVV+ALRAAYNNPERAVDYLYSGIPEQ+E PPAA VPSTV  TNPS      
Sbjct: 181 GGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPAQP 240

Query: 241 AQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRA 300
           AQPAQPAQPAS T+TGPNANPLDLFPQG+PN++SGAV SGSLDFLRNSPQFQALRAMVRA
Sbjct: 241 AQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMVRA 300

Query: 301 NPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTP 360
           NPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQLA+AMPQAITVTP
Sbjct: 301 NPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITVTP 360

Query: 361 EEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           EEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 EEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 409

[Close]

BLAST of CmaCh18G010280.1 vs. ExPASy TrEMBL
Match: A0A6J1GXU6 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111458469 PE=3 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 4.9e-195
Identity = 370/411 (90.02%), Postives = 385/411 (93.67%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEV+P+DMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVKPEDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV+ENSFIVIMLTKNKSSSG TSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVSENSFIVIMLTKNKSSSGATSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSS-------LPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQIL 180
           PPAT+T S+        PAPAP+PA  PATTVL ESDVYSQAASNLVAGSNLE+TIQQIL
Sbjct: 121 PPATVTDSTPPAPPALAPAPAPSPAAVPATTVLAESDVYSQAASNLVAGSNLEDTIQQIL 180

Query: 181 LMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPS---- 240
           LMGGGIWDRDTVV+ALRAAYNNPERAVDYLYSGIPEQ+E PPAA VPSTV  TNPS    
Sbjct: 181 LMGGGIWDRDTVVRALRAAYNNPERAVDYLYSGIPEQLETPPAAGVPSTVQATNPSAQPA 240

Query: 241 --AQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMV 300
             AQPAQPAQPAS T+TGPNANPLDLFPQG+PN++SGAV SGSLDFLRNSPQFQALRAMV
Sbjct: 241 QPAQPAQPAQPASVTSTGPNANPLDLFPQGLPNISSGAVGSGSLDFLRNSPQFQALRAMV 300

Query: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITV 360
           RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGN+LGQLA+AMPQAITV
Sbjct: 301 RANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNILGQLAEAMPQAITV 360

Query: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 TPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 411

[Close]

BLAST of CmaCh18G010280.1 vs. NCBI nr
Match: XP_022968287.1 (ubiquitin receptor RAD23d-like [Cucurbita maxima])

HSP 1 Score: 748.8 bits (1932), Expect = 2.4e-212
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
           PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW
Sbjct: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240
           DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS
Sbjct: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240

Query: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300
           ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE
Sbjct: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300

Query: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360
           LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED
Sbjct: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360

Query: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 398

[Close]

BLAST of CmaCh18G010280.1 vs. NCBI nr
Match: XP_022945312.1 (ubiquitin receptor RAD23d-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 745.3 bits (1923), Expect = 2.6e-211
Identity = 396/398 (99.50%), Postives = 396/398 (99.50%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQPQDMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
           PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW
Sbjct: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240
           DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS
Sbjct: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240

Query: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300
           AT TGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE
Sbjct: 241 ATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300

Query: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360
           LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED
Sbjct: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLED 360

Query: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 LGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 398

[Close]

BLAST of CmaCh18G010280.1 vs. NCBI nr
Match: KAG7013030.1 (Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 740.3 bits (1910), Expect = 8.5e-210
Identity = 396/400 (99.00%), Postives = 396/400 (99.00%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQPQDMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 66  MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 125

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 126 ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 185

Query: 121 PPATITTSSL--PAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGG 180
           PPATITTSSL  PAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGG
Sbjct: 186 PPATITTSSLPAPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGG 245

Query: 181 IWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQP 240
           IWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQP
Sbjct: 246 IWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQP 305

Query: 241 ASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPML 300
           ASAT TGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPML
Sbjct: 306 ASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPML 365

Query: 301 QELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRL 360
           QELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRL
Sbjct: 366 QELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRL 425

Query: 361 EDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           EDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 426 EDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 465

[Close]

BLAST of CmaCh18G010280.1 vs. NCBI nr
Match: XP_023542376.1 (ubiquitin receptor RAD23d-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 739.6 bits (1908), Expect = 1.4e-209
Identity = 396/401 (98.75%), Postives = 396/401 (98.75%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEV PQDMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVHPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
           PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW
Sbjct: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQP-- 240
           DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQP  
Sbjct: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAQ 240

Query: 241 -ASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPM 300
            ASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPM
Sbjct: 241 TASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPM 300

Query: 301 LQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQR 360
           LQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQR
Sbjct: 301 LQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQR 360

Query: 361 LEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           LEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 LEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 401

[Close]

BLAST of CmaCh18G010280.1 vs. NCBI nr
Match: XP_022945311.1 (ubiquitin receptor RAD23d-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 735.7 bits (1898), Expect = 2.1e-208
Identity = 396/412 (96.12%), Postives = 396/412 (96.12%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKGSHFEIEVQPQDMVADVKK IETVQGADVYPAAQQMLIHQGKVLKDGTTLD
Sbjct: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKNIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA
Sbjct: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120

Query: 121 PPATITTSSLP--------------APAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE 180
           PPATITTSSLP              APAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE
Sbjct: 121 PPATITTSSLPAPAPAQAPAPAPAQAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLE 180

Query: 181 ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT 240
           ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT
Sbjct: 181 ETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVT 240

Query: 241 NPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM 300
           NPSAQPAQPAQPASAT TGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM
Sbjct: 241 NPSAQPAQPAQPASATTTGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAM 300

Query: 301 VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT 360
           VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT
Sbjct: 301 VRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAIT 360

Query: 361 VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 399
           VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN
Sbjct: 361 VTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFEGNQN 412

[Close]

BLAST of CmaCh18G010280.1 vs. TAIR 10
Match: AT5G38470.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 481.1 bits (1237), Expect = 8.6e-136
Identity = 269/395 (68.10%), Postives = 311/395 (78.73%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEIEV+P D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S  G S+ +  AP +  PQ  A    + P  T+ VP+PTS 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAP--TASVPVPTS- 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
                          A A APAT    ++DVY QAASNLVAG+ LE T+QQIL MGGG W
Sbjct: 121 -------------GTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPST-VPVTNPSAQPAQPAQPA 240
           DRDTVV+ALRAA+NNPERAV+YLYSGIP Q E+PP A  P+T     NP AQP Q A PA
Sbjct: 181 DRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPA 240

Query: 241 SATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQ 300
           +AT  GPNANPL+LFPQG+P   +GA  +G+LDFLRNS QFQALRAMV+ANPQILQPMLQ
Sbjct: 241 AATG-GPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQILQPMLQ 300

Query: 301 ELGKQNPQLIRLIQDHQPDFLRLINEPLEGEGNVLGQLADAMPQAITVTPEEREAIQRLE 360
           ELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE NV+ QL  AMPQA+TVTPEEREAI+RLE
Sbjct: 301 ELGKQNPQLVRLIQEHQADFLRLINEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLE 360

Query: 361 DLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 395
            +GFDRA+V+EVFFACNKNEE+AANYLLDH+HEFE
Sbjct: 361 GMGFDRAMVLEVFFACNKNEELAANYLLDHMHEFE 376

[Close]

BLAST of CmaCh18G010280.1 vs. TAIR 10
Match: AT3G02540.3 (Rad23 UV excision repair protein family )

HSP 1 Score: 480.3 bits (1235), Expect = 1.5e-135
Identity = 276/420 (65.71%), Postives = 320/420 (76.19%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEIEV+P+D V DVKK IE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNK-------SSSGGTSSTTQAAPVSKAPQNT--APAPAATPVST 120
           ENKVAENSFIVIM+ K+K       S+S GTS      P +  P  +   PA  + PV+ 
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 S------EVPLPTSAPPATITTSSLPAPAPAPAQAPATTVLPES------DVYSQAASNL 180
           +        P PT AP A   T + P P P PA   ++T  P+S      DVY QAASNL
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGQGDVYGQAASNL 180

Query: 181 VAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHV 240
            AGSNLE TIQQIL MGGG WDR+TVV ALRAA+NNPERAV+YLY+GIPEQ EVPP A  
Sbjct: 181 AAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVARP 240

Query: 241 PSTVPVTNPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQ 300
           P++     P+  PAQ  QPA+A A+GPNANPLDLFPQG+PN+  G   +G+LDFLRNS Q
Sbjct: 241 PAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFLRNSQQ 300

Query: 301 FQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EGNVLGQ 360
           FQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    GN+LGQ
Sbjct: 301 FQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLGQ 360

Query: 361 LADAM--PQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 395
           +A  M  PQAI VT EEREAI+RLE +GF+RALV+EVFFACNKNEE+AANYLLDH+HEFE
Sbjct: 361 MAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFE 417

[Close]

BLAST of CmaCh18G010280.1 vs. TAIR 10
Match: AT3G02540.1 (Rad23 UV excision repair protein family )

HSP 1 Score: 479.9 bits (1234), Expect = 1.9e-135
Identity = 276/421 (65.56%), Postives = 320/421 (76.01%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTLKG+HFEIEV+P+D V DVKK IE+VQGADVYPAA+QMLIHQGKVLKD TT++
Sbjct: 1   MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60

Query: 61  ENKVAENSFIVIMLTKNK-------SSSGGTSSTTQAAPVSKAPQNT--APAPAATPVST 120
           ENKVAENSFIVIM+ K+K       S+S GTS      P +  P  +   PA  + PV+ 
Sbjct: 61  ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120

Query: 121 S------EVPLPTSAPPATITTSSLPAPAPAPAQAPATTVLPES-------DVYSQAASN 180
           +        P PT AP A   T + P P P PA   ++T  P+S       DVY QAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180

Query: 181 LVAGSNLEETIQQILLMGGGIWDRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAH 240
           L AGSNLE TIQQIL MGGG WDR+TVV ALRAA+NNPERAV+YLY+GIPEQ EVPP A 
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVPPVAR 240

Query: 241 VPSTVPVTNPSAQPAQPAQPASATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSP 300
            P++     P+  PAQ  QPA+A A+GPNANPLDLFPQG+PN+  G   +G+LDFLRNS 
Sbjct: 241 PPAS--AGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNV-GGNPGAGTLDFLRNSQ 300

Query: 301 QFQALRAMVRANPQILQPMLQELGKQNPQLIRLIQDHQPDFLRLINEPLEG---EGNVLG 360
           QFQALRAMV+ANPQ+LQPMLQELGKQNP L+RLIQDHQ DFLRLINEP+EG    GN+LG
Sbjct: 301 QFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNLLG 360

Query: 361 QLADAM--PQAITVTPEEREAIQRLEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEF 395
           Q+A  M  PQAI VT EEREAI+RLE +GF+RALV+EVFFACNKNEE+AANYLLDH+HEF
Sbjct: 361 QMAAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEF 418

[Close]

BLAST of CmaCh18G010280.1 vs. TAIR 10
Match: AT5G38470.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 375.6 bits (963), Expect = 5.1e-104
Identity = 218/331 (65.86%), Postives = 252/331 (76.13%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MKIFVKTL GS+FEIEV+P D V+DVK  IETV+GA+ YPAA+QMLIHQGKVLKD TTL+
Sbjct: 1   MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           EN V ENSFIVIML+K K+S  G S+ +  AP +  PQ  A    + P  T+ VP+PTS 
Sbjct: 61  ENNVVENSFIVIMLSKTKASPSGASTASAPAPSATQPQTVATPQVSAP--TASVPVPTS- 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
                          A A APAT    ++DVY QAASNLVAG+ LE T+QQIL MGGG W
Sbjct: 121 -------------GTATAAAPATAASVQTDVYGQAASNLVAGTTLESTVQQILDMGGGSW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPST-VPVTNPSAQPAQPAQPA 240
           DRDTVV+ALRAA+NNPERAV+YLYSGIP Q E+PP A  P+T     NP AQP Q A PA
Sbjct: 181 DRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPA 240

Query: 241 SATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQ 300
           +AT  GPNANPL+LFPQG+P   +GA  +G+LDFLRNS QFQALRAMV+ANPQILQPMLQ
Sbjct: 241 AATG-GPNANPLNLFPQGMPAADAGA-GAGNLDFLRNSQQFQALRAMVQANPQILQPMLQ 300

Query: 301 ELGKQNPQLIRLIQDHQPDFLRLINEPLEGE 331
           ELGKQNPQL+RLIQ+HQ DFLRLINEP+EGE
Sbjct: 301 ELGKQNPQLVRLIQEHQADFLRLINEPVEGE 312

[Close]

BLAST of CmaCh18G010280.1 vs. TAIR 10
Match: AT1G79650.2 (Rad23 UV excision repair protein family )

HSP 1 Score: 371.7 bits (953), Expect = 7.4e-103
Identity = 222/397 (55.92%), Postives = 270/397 (68.01%), Query Frame = 0


Query: 1   MKIFVKTLKGSHFEIEVQPQDMVADVKKKIETVQGADVYPAAQQMLIHQGKVLKDGTTLD 60
           MK+ VKTLKGSHFEI V P D +  VKK IE  QG D YP  QQ+LIH GKVLKD T+L 
Sbjct: 1   MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60

Query: 61  ENKVAENSFIVIMLTKNKSSSGGTSSTTQAAPVSKAPQNTAPAPAATPVSTSEVPLPTSA 120
           ENKV E  F+V+ML+K+K  SGG++      PVS    +T P   A P +T   P+P S 
Sbjct: 61  ENKVTEEGFLVVMLSKSK--SGGSAGQASVQPVSATTSSTKP---AAPSTTQSSPVPAS- 120

Query: 121 PPATITTSSLPAPAPAPAQAPATTVLPESDVYSQAASNLVAGSNLEETIQQILLMGGGIW 180
                       P PA  Q  A T     D Y QAAS LV+GS+LE+ +QQI+ MGGG W
Sbjct: 121 ------------PIPAQEQPAAQT-----DTYGQAASTLVSGSSLEQMVQQIMEMGGGSW 180

Query: 181 DRDTVVQALRAAYNNPERAVDYLYSGIPEQVEVPPAAHVPSTVPVTNPSAQPAQPAQPAS 240
           D++TV +ALRAAYNNPERAVDYLYSGIP+  EV     VP  VP    +   A P  PAS
Sbjct: 181 DKETVTRALRAAYNNPERAVDYLYSGIPQTAEVA----VP--VPEAQIAGSGAAPVAPAS 240

Query: 241 ATATGPNANPLDLFPQGVPNLASGAVSSGSLDFLRNSPQFQALRAMVRANPQILQPMLQE 300
               GPN++PLDLFPQ     A+G+   G+L+FLRN+ QFQ LR MV +NPQILQPMLQE
Sbjct: 241 G---GPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQE 300

Query: 301 LGKQNPQLIRLIQDHQPDFLRLINEPLE---GEGNVLGQLADAMPQAITVTPEEREAIQR 360
           LGKQNPQL+RLIQ++Q +FL+L+NEP E   GEG++  Q    MP AI VTP E+EAIQR
Sbjct: 301 LGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQR 360

Query: 361 LEDLGFDRALVVEVFFACNKNEEMAANYLLDHIHEFE 395
           LE +GFDRALV+E F AC++NEE+AANYLL++  +FE
Sbjct: 361 LEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFE 364

The following BLAST results are available for this feature:

BLAST of CmaCh18G010280.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84L30	1.2e-134	68.10	Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2	[more]
Q84L31	2.7e-134	65.56	Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2	[more]
Q40742	6.3e-115	60.00	Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]
Q84L33	1.1e-100	55.53	Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3	[more]
Q84L32	5.3e-98	52.39	Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=...	[more]

BLAST of CmaCh18G010280.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HT74	1.2e-212	100.00	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111467562 PE=3 SV=1	[more]
A0A6J1G0K5	1.3e-211	99.50	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1	[more]
A0A6J1G0H9	1.0e-208	96.12	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111449587 PE=3 SV=1	[more]
A0A6J1IZ65	3.4e-196	91.20	Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111479749 PE=3 SV=1	[more]
A0A6J1GXU6	4.9e-195	90.02	Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111458469 PE=3 SV=1	[more]

BLAST of CmaCh18G010280.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968287.1	2.4e-212	100.00	ubiquitin receptor RAD23d-like [Cucurbita maxima]	[more]
XP_022945312.1	2.6e-211	99.50	ubiquitin receptor RAD23d-like isoform X2 [Cucurbita moschata]	[more]
KAG7013030.1	8.5e-210	99.00	Ubiquitin receptor RAD23c, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023542376.1	1.4e-209	98.75	ubiquitin receptor RAD23d-like [Cucurbita pepo subsp. pepo]	[more]
XP_022945311.1	2.1e-208	96.12	ubiquitin receptor RAD23d-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh18G010280.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38470.1	8.6e-136	68.10	Rad23 UV excision repair protein family	[more]
AT3G02540.3	1.5e-135	65.71	Rad23 UV excision repair protein family	[more]
AT3G02540.1	1.9e-135	65.56	Rad23 UV excision repair protein family	[more]
AT5G38470.2	5.1e-104	65.86	Rad23 UV excision repair protein family	[more]
AT1G79650.2	7.4e-103	55.92	Rad23 UV excision repair protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004806	UV excision repair protein Rad23	PRINTS	PR01839	RAD23PROTEIN	coord: 345..361 score: 61.76 coord: 297..319 score: 58.89 coord: 362..376 score: 62.42 coord: 377..392 score: 61.36
IPR004806	UV excision repair protein Rad23	TIGRFAM	TIGR00601	TIGR00601	coord: 1..394 e-value: 4.6E-114 score: 379.5
IPR006636	Heat shock chaperonin-binding	SMART	SM00727	CBM	coord: 269..312 e-value: 6.6E-6 score: 35.6
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..75 e-value: 8.4E-23 score: 91.8
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..76 e-value: 1.8E-18 score: 66.0
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 19.477304
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 165..205 e-value: 7.3E-7 score: 38.8 coord: 351..388 e-value: 1.7E-8 score: 44.3
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 351..386 e-value: 2.4E-11 score: 43.2 coord: 165..203 e-value: 7.6E-14 score: 51.3
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 163..206 score: 12.619185
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 348..389 score: 14.474662
None	No IPR available	GENE3D	1.10.8.10		coord: 158..208 e-value: 5.5E-21 score: 76.2
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 6.5E-29 score: 101.5
None	No IPR available	GENE3D	1.10.8.10		coord: 343..390 e-value: 3.7E-23 score: 83.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..249
None	No IPR available	PANTHER	PTHR10621:SF46	EXCISION REPAIR PROTEIN RAD23, PUTATIVE-RELATED	coord: 1..394
None	No IPR available	PANTHER	PTHR10621	UV EXCISION REPAIR PROTEIN RAD23	coord: 1..394
None	No IPR available	CDD	cd01805	Ubl_Rad23	coord: 1..74 e-value: 2.17943E-30 score: 109.569
IPR015360	XPC-binding domain	PFAM	PF09280	XPC-binding	coord: 271..326 e-value: 3.6E-22 score: 77.9
IPR036353	XPC-binding domain superfamily	GENE3D	1.10.10.540		coord: 262..326 e-value: 1.7E-26 score: 93.6
IPR036353	XPC-binding domain superfamily	SUPERFAMILY	101238	XPC-binding domain	coord: 268..332
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 332..393
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 162..213
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh18G010280	CmaCh18G010280	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G010280.1:exon:335	CmaCh18G010280.1:exon:335	exon
CmaCh18G010280.1:exon:336	CmaCh18G010280.1:exon:336	exon
CmaCh18G010280.1:exon:337	CmaCh18G010280.1:exon:337	exon
CmaCh18G010280.1:exon:338	CmaCh18G010280.1:exon:338	exon
CmaCh18G010280.1:exon:339	CmaCh18G010280.1:exon:339	exon
CmaCh18G010280.1:exon:340	CmaCh18G010280.1:exon:340	exon
CmaCh18G010280.1:exon:341	CmaCh18G010280.1:exon:341	exon
CmaCh18G010280.1:exon:342	CmaCh18G010280.1:exon:342	exon
CmaCh18G010280.1:exon:343	CmaCh18G010280.1:exon:343	exon
CmaCh18G010280.1:exon:344	CmaCh18G010280.1:exon:344	exon
CmaCh18G010280.1:exon:345	CmaCh18G010280.1:exon:345	exon
CmaCh18G010280.1:exon:346	CmaCh18G010280.1:exon:346	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G010280.1:five_prime_utr	CmaCh18G010280.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_2	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_3	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_4	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_5	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_6	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_7	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_8	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_9	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_10	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_11	CDS
CmaCh18G010280.1:cds	CmaCh18G010280.1:cds_12	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh18G010280.1:three_prime_utr	CmaCh18G010280.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh18G010280.1	CmaCh18G010280.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding
molecular_function	GO:0070628	proteasome binding
molecular_function	GO:0043130	ubiquitin binding