CmaCh18G006200.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh18G006200.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr18: 5505929 .. 5507482 (-)
Sequence length393
RNA-Seq ExpressionCmaCh18G006200.1
SyntenyCmaCh18G006200.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCACGCCACAGACACAGACACAGACACGTTCCTCTTGGAAGATGGGTTCGAATCATTCTGCCTGTTCATGATGAAGTCGAAGAAGCTCAGTTATTGATAGATGGGTTGATGAATTGTACTTGTTTTTGCCTGTCAACGATTTCAATTTTCACTTTGCATAAGTTATTGTATGTACCTTTTGTCATCTAAAGCTTCAGTATAGTTCACTGCAAAGTGAATTCAAGGCTGTCTGTTAACGTAACATCAGTGGATCAGGAGACATGAAGATGATGTTCTCCCAGAGAAGAAACCACAGATGTTCTTGAATTGGATGTTGCTGCTGAAATTCGGAGATGATGGAATATGTGACAAAGACGACCGAGGAGGACAACTCACTCATTTCGTAGGTGGATTCCTTTCCTTCATATATGATTTGTTAGAAATCATAACCTCCACATTAATATGATATTGTCCACTTCAAGCATAAGTTCGTAGCTTTGGTTTTGATTTTTTCTAAATGCCTCATACCAATAGAGATACAGTCATTACTTATAAACTCATGATTATCTTCCGGATTAGGTTGTCTAGAGGAGACAGACCTTGGTTTGATGCTCCCTGCTAGATCAATGCCACCATATCATTCTCAATCATCACAGCCCTCCACCTTAACCTGTAAAAAGTTGGTGACATTGTCAAAAACTTGTTCACAAAATCGAACTGAAATGCACACAACGCAATCTTATCTACCTGAGCAGAGCATTCATCAACAAACTTCTGAAACATTCCCGCTTTTAATTGCCATTAAATTGCTTAAAATCATTTTGTTTCGCATCAAATTCTACTGATTCTAGGGTTCTAGCAGAACTGAAGAAAGCTATTTTAAATCTGAAAGAAACAGAGAGAGAGGACATACATGGGCTGCGGAAAAACTAGACGATAGAAGATTGGTAAAACTGCGAAATAGAGAGTCCATTGTAAGGCGTCCATACTGGAATCGATGCTATCGCCGATCCTGACGTAAACGCAGGGGTTCGATTTGCGAAAATCGAAGGAAACCAATTTTCCTCGACCGCAATCCCTAGCTCGATCTCGATCAGCTCGCTCCATTTCTCCTCTTCATTCTTGCTTAAGCTTCGATCTAATTGGAAAATCTTCACCGGCGAAGTAGTGCTTCCTCGTCGATCCTTGATCTTCAGAACAAATACCTCCTTCCAGCAACAGAAATTGCTCAGTGGAAGCCAGTATGTTGGAATTCCACTTTTGAAATTTCTCAGTTGTTTTCCTTTTCTGCTGAAAACGATAAGATCCACTACCAAAATTAAAGAAATAAGAAACAGCGACTACGGAATCTAGAACAGAAAGGCATGAACAACAACGAGGAAACTGAAAATTTGCAGTCGAATTTTGTATGCGATTTACTGATTACTTGATTTCATTATGCCGTCTACTCTCATCTACCATTAATGTGGGATTTAAGCTTCTAACGTACAAGAATTGAGCATTAAAGCAATTGATCTTATACTGGTTTTGAAGATTGAGTCAAGCCAGCAGCCCGGATTTGACATCATAG

mRNA sequence

ATGGTTCACGCCACAGACACAGACACAGACACGTTCCTCTTGGAAGATGGGTTCGAATCATTCTGCCTGTTCATGATGAAGTCGAAGAAGCTCAGCGTCCATACTGGAATCGATGCTATCGCCGATCCTGACGTAAACGCAGGGGTTCGATTTGCGAAAATCGAAGGAAACCAATTTTCCTCGACCGCAATCCCTAGCTCGATCTCGATCAGCTCGCTCCATTTCTCCTCTTCATTCTTGCTTAAGCTTCGATCTAATTGGAAAATCTTCACCGGCGAAGTAGTGCTTCCTCGTCGATCCTTGATCTTCAGAACAAATACCTCCTTCCAGCAACAGAAATTGCTCAGTGGAAGCCAATTGAGTCAAGCCAGCAGCCCGGATTTGACATCATAG

Coding sequence (CDS)

ATGGTTCACGCCACAGACACAGACACAGACACGTTCCTCTTGGAAGATGGGTTCGAATCATTCTGCCTGTTCATGATGAAGTCGAAGAAGCTCAGCGTCCATACTGGAATCGATGCTATCGCCGATCCTGACGTAAACGCAGGGGTTCGATTTGCGAAAATCGAAGGAAACCAATTTTCCTCGACCGCAATCCCTAGCTCGATCTCGATCAGCTCGCTCCATTTCTCCTCTTCATTCTTGCTTAAGCTTCGATCTAATTGGAAAATCTTCACCGGCGAAGTAGTGCTTCCTCGTCGATCCTTGATCTTCAGAACAAATACCTCCTTCCAGCAACAGAAATTGCTCAGTGGAAGCCAATTGAGTCAAGCCAGCAGCCCGGATTTGACATCATAG

Protein sequence

MVHATDTDTDTFLLEDGFESFCLFMMKSKKLSVHTGIDAIADPDVNAGVRFAKIEGNQFSSTAIPSSISISSLHFSSSFLLKLRSNWKIFTGEVVLPRRSLIFRTNTSFQQQKLLSGSQLSQASSPDLTS
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh18G006200.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh18G006200.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh18G006200.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh18G006200.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh18G006200CmaCh18G006200gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh18G006200.1:exon:1556CmaCh18G006200.1:exon:1556exon
CmaCh18G006200.1:exon:1555CmaCh18G006200.1:exon:1555exon
CmaCh18G006200.1:exon:1554CmaCh18G006200.1:exon:1554exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh18G006200.1:cdsCmaCh18G006200.1:cds_3CDS
CmaCh18G006200.1:cdsCmaCh18G006200.1:cds_2CDS
CmaCh18G006200.1:cdsCmaCh18G006200.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh18G006200.1CmaCh18G006200.1-proteinpolypeptide