CmaCh17G012670.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G012670.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Disease resistance protein (TIR-NBS class)
Location	Cma_Chr17: 8611472 .. 8611684 (-)
Sequence length	213
RNA-Seq Expression	CmaCh17G012670.1
Synteny	CmaCh17G012670.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTGGTTGTGATCTCAGAACACTACGCTTCCTCGTGGTGGTGCCTTGCGGAGTTGGTTAAGATACTCGAGTATAGAGAGCATACGGGAATGAAGACTATGCCGATCTTTTACAAAGTGGATCCTTCTGATGTTAATGAAGCTAGATTTGGAGAAGATGACTTGAAGGTTCTTCAATGGAGGAAGGCTCTGTTTGAGATCGCCGGCTAA

mRNA sequence

ATGGCCGTGGTTGTGATCTCAGAACACTACGCTTCCTCGTGGTGGTGCCTTGCGGAGTTGGTTAAGATACTCGAGTATAGAGAGCATACGGGAATGAAGACTATGCCGATCTTTTACAAAGTGGATCCTTCTGATGTTAATGAAGCTAGATTTGGAGAAGATGACTTGAAGGTTCTTCAATGGAGGAAGGCTCTGTTTGAGATCGCCGGCTAA

Coding sequence (CDS)

ATGGCCGTGGTTGTGATCTCAGAACACTACGCTTCCTCGTGGTGGTGCCTTGCGGAGTTGGTTAAGATACTCGAGTATAGAGAGCATACGGGAATGAAGACTATGCCGATCTTTTACAAAGTGGATCCTTCTGATGTTAATGAAGCTAGATTTGGAGAAGATGACTTGAAGGTTCTTCAATGGAGGAAGGCTCTGTTTGAGATCGCCGGCTAA

Protein sequence

MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVNEARFGEDDLKVLQWRKALFEIAG

Homology

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy Swiss-Prot
Match: O82500 (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 8.7e-12
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVNE--ARFGEDDLKV 60
           ++VV+ SE+YASS WCL EL++I++ +E  G+K MP+FYKVDPSD+ +   +FG   L+ 
Sbjct: 66  ISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLET 125

Query: 61  L---------QWRKALFEIA 70
                      WR+AL + A
Sbjct: 126 CCGKTEERQHNWRRALTDAA 145

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.5e-11
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 2   AVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVN-------------E 61
           AVVV S++YASS WCL ELVKILE  E   +  +P+FY VDPS V              E
Sbjct: 69  AVVVFSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPSTVRKQNGEYAVCFTKFE 128

Query: 62  ARFGEDDLKVLQWRKALFEIA 70
           A   +D  KVL+WR+AL ++A
Sbjct: 129 ANLVDDRDKVLRWREALTKVA 149

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-09
Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 2   AVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV--NEARFGEDDL--- 61
           +V+V SE+YA S WCL ELVKI+E ++  G    PIFY VDPS V   E  FGE      
Sbjct: 80  SVIVFSENYAHSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSHVRKQEGSFGEAFAGYE 139

Query: 62  -----KVLQWRKALFEIA 70
                K+ +WR AL E A
Sbjct: 140 ENWKDKIPRWRTALTEAA 157

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy Swiss-Prot
Match: F4JWM0 (Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-09
Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVNE--ARFGEDDLKV 60
           +A+V++S++YASS WCL ELV+I+  RE  G   M +FY+VDPSDV +    FG+   K 
Sbjct: 116 IAIVLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKT 175

Query: 61  L---------QWRKALFEIA 70
                     +W +AL ++A
Sbjct: 176 CVGKTQEVKQRWSRALMDVA 195

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-09
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 2   AVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-----------NEAR 61
           AVVV+SE+YA+S WCL ELV I+++ +   +  MPIFY V+P+ V            +  
Sbjct: 66  AVVVVSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHA 125

Query: 62  FGEDDLKVLQWRKALFEIA 70
             ED  KVL+WR+AL   A
Sbjct: 126 SREDPEKVLKWRQALTNFA 144

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy TrEMBL
Match: A0A6J1JU68 (TMV resistance protein N-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487933 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.0e-24
Identity = 62/83 (74.70%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GM+ MPIFYKVDPSDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRK+LFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKSLFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy TrEMBL
Match: A0A6J1JQ43 (TMV resistance protein N-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487933 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.0e-24
Identity = 62/83 (74.70%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GM+ MPIFYKVDPSDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRK+LFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKSLFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy TrEMBL
Match: A0A6J1JS91 (TMV resistance protein N-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487933 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.0e-24
Identity = 62/83 (74.70%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GM+ MPIFYKVDPSDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRK+LFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKSLFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy TrEMBL
Match: A0A6J1GN42 (TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455924 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 63/83 (75.90%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GMK MPIFYKVD SDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRKALFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKALFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. ExPASy TrEMBL
Match: A0A6J1GPD6 (TMV resistance protein N-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455924 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 63/83 (75.90%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GMK MPIFYKVD SDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRKALFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKALFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. NCBI nr
Match: KAG6575988.1 (Disease resistance protein TAO1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128.3 bits (321), Expect = 2.7e-26
Identity = 63/70 (90.00%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 1  MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVNEARFGEDDLKVLQ 60
          MAVVVISEHYAS  WCLAEL KILE REH GMK MPIFYKVDPSDVNEARFGEDDLKVLQ
Sbjct: 20 MAVVVISEHYASLRWCLAELAKILECREHMGMKIMPIFYKVDPSDVNEARFGEDDLKVLQ 79

Query: 61 WRKALFEIAG 71
          W KALFEIAG
Sbjct: 80 WWKALFEIAG 89

[Close]

BLAST of CmaCh17G012670.1 vs. NCBI nr
Match: XP_022991209.1 (TMV resistance protein N-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-23
Identity = 62/83 (74.70%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GM+ MPIFYKVDPSDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRK+LFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKSLFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. NCBI nr
Match: XP_022991211.1 (TMV resistance protein N-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-23
Identity = 62/83 (74.70%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GM+ MPIFYKVDPSDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRK+LFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKSLFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. NCBI nr
Match: XP_022991210.1 (TMV resistance protein N-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 119.4 bits (298), Expect = 1.2e-23
Identity = 62/83 (74.70%), Postives = 65/83 (78.31%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GM+ MPIFYKVDPSDV             +
Sbjct: 71  MAVVVISEHYASSRWCLAELVKILECREHMGMEVMPIFYKVDPSDVRNQRGSFGKAFLKH 130

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRK+LFEIAG
Sbjct: 131 EARFGEDDSKVLQWRKSLFEIAG 153

[Close]

BLAST of CmaCh17G012670.1 vs. NCBI nr
Match: XP_023548551.1 (TMV resistance protein N-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 118.2 bits (295), Expect = 2.8e-23
Identity = 63/83 (75.90%), Postives = 64/83 (77.11%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------N 60
           MAVVVISEHYASS WCLAELVKILE REH GMK MPIFYKVD SDV             +
Sbjct: 70  MAVVVISEHYASSRWCLAELVKILECREHMGMKVMPIFYKVDLSDVRNQRGSFGKAFLKH 129

Query: 61  EARFGEDDLKVLQWRKALFEIAG 71
           EARFGEDD KVLQWRKALFEIAG
Sbjct: 130 EARFGEDDSKVLQWRKALFEIAG 152

[Close]

BLAST of CmaCh17G012670.1 vs. TAIR 10
Match: AT4G11170.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 70.5 bits (171), Expect = 6.2e-13
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVNE--ARFGEDDLKV 60
           ++VV+ SE+YASS WCL EL++I++ +E  G+K MP+FYKVDPSD+ +   +FG   L+ 
Sbjct: 66  ISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLET 125

Query: 61  L---------QWRKALFEIA 70
                      WR+AL + A
Sbjct: 126 CCGKTEERQHNWRRALTDAA 145

[Close]

BLAST of CmaCh17G012670.1 vs. TAIR 10
Match: AT1G72950.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 66.6 bits (161), Expect = 8.9e-12
Identity = 38/81 (46.91%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 2   AVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-------------NE 61
           AVVV+S +YA+S WCL ELVKI+++     +K MPIFY VDP  V             +E
Sbjct: 68  AVVVVSVNYAASRWCLEELVKIMDFENMGSLKVMPIFYGVDPCHVRRQIGEVAEQFKKHE 127

Query: 62  ARFGEDDLKVLQWRKALFEIA 70
            R  ED  KVL WR+AL  +A
Sbjct: 128 GR--EDHEKVLSWRQALTNLA 146

[Close]

BLAST of CmaCh17G012670.1 vs. TAIR 10
Match: AT5G40910.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11
Identity = 39/80 (48.75%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 1   MAVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVNEAR--FGEDDLKV 60
           +++VV+SE YASS WCL ELV+IL+ +E +G   M IFYKVDPSDV + R  FG    K 
Sbjct: 67  VSIVVLSEKYASSCWCLDELVEILKCKEASGQVVMTIFYKVDPSDVRKQRGDFGSTFKKT 126

Query: 61  LQ---------WRKALFEIA 70
            +         W KAL  IA
Sbjct: 127 CEGKTWIVKQRWIKALEYIA 146

[Close]

BLAST of CmaCh17G012670.1 vs. TAIR 10
Match: AT5G17680.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 64.3 bits (155), Expect = 4.4e-11
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0


Query: 2   AVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDVNEAR--FGE------ 61
           A+VV+S +YA+S WCL EL+KI+E  + T    +PIFY+VDPSDV   R  FGE      
Sbjct: 75  AIVVVSRNYAASSWCLDELLKIMECNKDT---IVPIFYEVDPSDVRRQRGSFGEDVESHS 134

Query: 62  DDLKVLQWRKALFEIA 70
           D  KV +W++AL ++A
Sbjct: 135 DKEKVGKWKEALKKLA 147

[Close]

BLAST of CmaCh17G012670.1 vs. TAIR 10
Match: AT1G72930.1 (toll/interleukin-1 receptor-like )

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-10
Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 2   AVVVISEHYASSWWCLAELVKILEYREHTGMKTMPIFYKVDPSDV-----------NEAR 61
           AVVV+SE+YA+S WCL ELV I+++ +   +  MPIFY V+P+ V            +  
Sbjct: 66  AVVVVSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHA 125

Query: 62  FGEDDLKVLQWRKALFEIA 70
             ED  KVL+WR+AL   A
Sbjct: 126 SREDPEKVLKWRQALTNFA 144

The following BLAST results are available for this feature:

BLAST of CmaCh17G012670.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82500	8.7e-12	43.75	Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN...	[more]
A0A290U7C4	1.5e-11	48.15	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
V9M2S5	1.4e-09	47.44	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]
F4JWM0	1.8e-09	41.25	Disease resistance-like protein DSC2 OS=Arabidopsis thaliana OX=3702 GN=DSC2 PE=...	[more]
Q9SSN3	1.8e-09	43.04	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR ...	[more]

BLAST of CmaCh17G012670.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JU68	6.0e-24	74.70	TMV resistance protein N-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1JQ43	6.0e-24	74.70	TMV resistance protein N-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1JS91	6.0e-24	74.70	TMV resistance protein N-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1GN42	1.3e-23	75.90	TMV resistance protein N-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1GPD6	1.3e-23	75.90	TMV resistance protein N-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CmaCh17G012670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575988.1	2.7e-26	90.00	Disease resistance protein TAO1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022991209.1	1.2e-23	74.70	TMV resistance protein N-like isoform X1 [Cucurbita maxima]	[more]
XP_022991211.1	1.2e-23	74.70	TMV resistance protein N-like isoform X3 [Cucurbita maxima]	[more]
XP_022991210.1	1.2e-23	74.70	TMV resistance protein N-like isoform X2 [Cucurbita maxima]	[more]
XP_023548551.1	2.8e-23	75.90	TMV resistance protein N-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G012670.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11170.1	6.2e-13	43.75	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G72950.1	8.9e-12	46.91	Disease resistance protein (TIR-NBS class)	[more]
AT5G40910.1	1.2e-11	48.75	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G17680.1	4.4e-11	48.68	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT1G72930.1	1.3e-10	43.04	toll/interleukin-1 receptor-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 1..70 e-value: 1.8E-19 score: 72.1
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 2..68
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 2..65 e-value: 9.4E-15 score: 54.8
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 1..70 score: 17.938875
None	No IPR available	PANTHER	PTHR32009	TMV RESISTANCE PROTEIN N-LIKE	coord: 1..69
None	No IPR available	PANTHER	PTHR32009:SF84	TOLL/INTERLEUKIN-LIKE RECEPTOR-PROTEIN	coord: 1..69

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G012670	CmaCh17G012670	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G012670.1:exon:640	CmaCh17G012670.1:exon:640	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G012670.1:cds	CmaCh17G012670.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G012670.1	CmaCh17G012670.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity