CmaCh17G004660.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh17G004660.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	auxin-responsive protein SAUR36-like
Location	Cma_Chr17: 2821919 .. 2822422 (+)
Sequence length	504
RNA-Seq Expression	CmaCh17G004660.1
Synteny	CmaCh17G004660.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGCTCCGAGGCTTCAAGCTTCGAAAGCGATTCGTTCTATTCTCAAGATGGCTCTGTCGAAATATCCGACCGGCGACTCGATATTACAGGCTAAGCCAGGAGGACTCATCGCCCGAGCCGAAGTTGTCGTCAAGGCTTCTCAGCTGGAGGCGCGGTCTGAGTTTCCTCCGACGAGCTGAGCCGGTCCAGGAGAAGTGTAACCCGGTGCCGAAAGGACAGCTGGCGGTCTATGTCGGTGAAAGCGGAGGAGAATTCAGCCGGGTTTTGGTGCCGGTGGTGTATTTCAAGCATAGGCTTTTCATTGAGTTGTTGAGAGAGGCAGAGGATGAATATGGGTTTGAACATAAGAAAGGGATTACTTTTCCTTGTGGGTATTCGGAGTTTGAGCGGATCCTGACCCGGATCCGGGATTGCCGGTACTGGAGGAGCTCCGGCAGCTGCTGCTCGCCGGAGGAGGAGGAGGATGTGTGGAGGCTTGAAGCTAGGTTAAGAAGATGA

mRNA sequence

ATGAGAAAGCTCCGAGGCTTCAAGCTTCGAAAGCGATTCGTTCTATTCTCAAGATGGCTCTGTCGAAATATCCGACCGGCGACTCGATATTACAGGCTAAGCCAGGAGGACTCATCGCCCGAGCCGAAGTTGTCGTCAAGGCTTCTCAGCTGGAGGCGCGGTCTGAGTTTCCTCCGACGAGCTGAGCCGGTCCAGGAGAAGTGTAACCCGGTGCCGAAAGGACAGCTGGCGGTCTATGTCGGTGAAAGCGGAGGAGAATTCAGCCGGGTTTTGGTGCCGGTGGTGTATTTCAAGCATAGGCTTTTCATTGAGTTGTTGAGAGAGGCAGAGGATGAATATGGGTTTGAACATAAGAAAGGGATTACTTTTCCTTGTGGGTATTCGGAGTTTGAGCGGATCCTGACCCGGATCCGGGATTGCCGGTACTGGAGGAGCTCCGGCAGCTGCTGCTCGCCGGAGGAGGAGGAGGATGTGTGGAGGCTTGAAGCTAGGTTAAGAAGATGA

Coding sequence (CDS)

ATGAGAAAGCTCCGAGGCTTCAAGCTTCGAAAGCGATTCGTTCTATTCTCAAGATGGCTCTGTCGAAATATCCGACCGGCGACTCGATATTACAGGCTAAGCCAGGAGGACTCATCGCCCGAGCCGAAGTTGTCGTCAAGGCTTCTCAGCTGGAGGCGCGGTCTGAGTTTCCTCCGACGAGCTGAGCCGGTCCAGGAGAAGTGTAACCCGGTGCCGAAAGGACAGCTGGCGGTCTATGTCGGTGAAAGCGGAGGAGAATTCAGCCGGGTTTTGGTGCCGGTGGTGTATTTCAAGCATAGGCTTTTCATTGAGTTGTTGAGAGAGGCAGAGGATGAATATGGGTTTGAACATAAGAAAGGGATTACTTTTCCTTGTGGGTATTCGGAGTTTGAGCGGATCCTGACCCGGATCCGGGATTGCCGGTACTGGAGGAGCTCCGGCAGCTGCTGCTCGCCGGAGGAGGAGGAGGATGTGTGGAGGCTTGAAGCTAGGTTAAGAAGATGA

Protein sequence

MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRRAEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKGITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR

Homology

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BLAST of CmaCh17G004660.1 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-25
Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIR-PATRYYRL-SQEDSSPEPKLSSRLLSWRRGL--S 60
           MRK+ GF++ +R    SRW+ R  R   + Y R+ S + +    +  ++L SW + L  S
Sbjct: 1   MRKIIGFRIGRR---VSRWIFRKTRIQRSGYNRIHSTQQACMLMRPLAKLKSWGQRLKQS 60

Query: 61  FLRRAE------PV-QEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREA 120
           F RR+       PV  +K +PVP+G LA+YVG+  G+  RVLVP+VYF H LF ELLREA
Sbjct: 61  FRRRSTRRSAYIPVDHKKADPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREA 120

Query: 121 EDEYGFEHKKGITFPCGYSEFERILTRI 138
           E EYGF H+ GIT PC YS+FER+ TRI
Sbjct: 121 EKEYGFCHEGGITIPCLYSDFERVKTRI 145

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 67  KCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKGITFPCG 126
           K   VPKG LA+ VG  G E  R +VPV+YF H LF++LL+EAEDEYGF+ K  IT PC 
Sbjct: 20  KVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCH 79

Query: 127 YSEFERI 134
             EF  +
Sbjct: 80  VEEFRYV 86

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-10
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 66  EKCNP--VPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKGITF 125
           E C P  VPKG   VYVGE+    SR +VP+ +  H  F  LL+ AE+E+GF+H  G+T 
Sbjct: 36  EDCLPLDVPKGHFPVYVGENR---SRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTI 95

Query: 126 PCGYSEFERILTRIR 139
           PC    F+ + + IR
Sbjct: 96  PCDELVFQTLTSMIR 107

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-10
Identity = 31/84 (36.90%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 56  SFLRRAEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGF 115
           SFL   + ++ + +  P+G +AVYVGE+  +  R +VPV Y    LF +LL ++E+E+G+
Sbjct: 6   SFLGAKQIIRRESSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGY 65

Query: 116 EHKK-GITFPCGYSEFERILTRIR 139
           +H   G+T PC  S F  + ++I+
Sbjct: 66  DHPMGGLTIPCHESLFFTVTSQIQ 89

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-09
Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKK- 120
           A     K   VPKG L VYVG+   +  R L+PV Y     F +LL +AE+E+G++H   
Sbjct: 15  ANQASSKSVEVPKGYLVVYVGD---KMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMG 74

Query: 121 GITFPCGYSEFERILTRIRD 140
           G+T PC   EF  + + + D
Sbjct: 75  GLTIPCKEDEFLTVTSHLND 91

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy TrEMBL
Match: A0A6J1L2T6 (auxin-responsive protein SAUR36-like OS=Cucurbita maxima OX=3661 GN=LOC111499325 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 8.5e-93
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 60
           MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR
Sbjct: 18  MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 77

Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120
           AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG
Sbjct: 78  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 137

Query: 121 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 168
           ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR
Sbjct: 138 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 184

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy TrEMBL
Match: A0A6J1H5H7 (auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC111460307 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.9e-86
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 60
           MRKLRGFKLRKR VLFSRWLCRNIRPATRYYRLSQEDSSPE KLSSRLLSW RGLSFLRR
Sbjct: 1   MRKLRGFKLRKRLVLFSRWLCRNIRPATRYYRLSQEDSSPELKLSSRLLSWSRGLSFLRR 60

Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120
           AEPV+EK NPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG
Sbjct: 61  AEPVREKRNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120

Query: 121 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 168
           ITFPCGYSEFERILTRIRDCR+WRSSGSCCSP EEEDVWRLEARLRR
Sbjct: 121 ITFPCGYSEFERILTRIRDCRHWRSSGSCCSP-EEEDVWRLEARLRR 166

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy TrEMBL
Match: A0A1S3C755 (auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103497676 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.3e-60
Identity = 124/171 (72.51%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPAT-----RYYRLSQEDSSPEPKLSSRLLSWRRGL 60
           M+KLR FKLRKR +LFSRW  RNIRP T     RYYRLSQ DS  EPKLSS+LLSW R L
Sbjct: 1   MKKLRRFKLRKRLILFSRWFGRNIRPMTSLSSARYYRLSQGDSLKEPKLSSKLLSWGRQL 60

Query: 61  SFLRRAEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGF 120
           SFLR+    +EK + VPKGQLAVYVGESGG  SRVLVPVVYFKH+LFIELLREAE+EYGF
Sbjct: 61  SFLRQRVSSEEKPDLVPKGQLAVYVGESGGGLSRVLVPVVYFKHKLFIELLREAEEEYGF 120

Query: 121 EHKKGITFPCGYSEFERILTRIRDC----RYWRSSGSCCSPE-EEEDVWRL 162
            H+KGIT PCGYSEFERI T+IRDC      WRSSGSCCSPE ++ D+WRL
Sbjct: 121 RHEKGITLPCGYSEFERIQTKIRDCGRSWPRWRSSGSCCSPEGDDVDLWRL 171

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy TrEMBL
Match: A0A0A0K7J7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007440 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 5.8e-57
Identity = 124/173 (71.68%), Postives = 135/173 (78.03%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPAT-----RYYRLSQE-DSSPEPKLSSRLLSWRRG 60
           M+KLR FKLRKR +LFSRW  RNIRP T     RYYRL+QE +S  EPKLSS+LLSW R 
Sbjct: 1   MKKLRRFKLRKRLILFSRWFGRNIRPMTSLSSVRYYRLTQEANSLKEPKLSSKLLSWGRQ 60

Query: 61  LSFLRRAEPVQEKCNP-VPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEY 120
           LSFLR+    +EK +  VPKGQLAVYVGESGG  SRVLVPVVYFKHRLFIELLREAE+EY
Sbjct: 61  LSFLRQRVSTEEKPDHLVPKGQLAVYVGESGGGLSRVLVPVVYFKHRLFIELLREAEEEY 120

Query: 121 GFEHKKGITFPCGYSEFERILTRIRDCR----YWRSSGSCCSPEEEEDVWRLE 163
           GF H+KGIT PCGYSEFERI T+IRDCR     WRSSGSCCSPE   D  R E
Sbjct: 121 GFRHEKGITLPCGYSEFERIQTKIRDCRRSWARWRSSGSCCSPERGFDHERCE 173

[Close]

BLAST of CmaCh17G004660.1 vs. ExPASy TrEMBL
Match: A0A5D3CQF2 (Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold268G00180 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 6.8e-50
Identity = 103/140 (73.57%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 27  ATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRRAEPVQEKCNPVPKGQLAVYVGESGGE 86
           + RYYRLSQ DS  EPKLSS+LLSW R LSFLR+    +EK + VPKGQLAVYVGESGG 
Sbjct: 6   SARYYRLSQGDSLKEPKLSSKLLSWGRQLSFLRQRVSSEEKPDLVPKGQLAVYVGESGGG 65

Query: 87  FSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKGITFPCGYSEFERILTRIRDC----RY 146
            SRVLVPVVYFKH+LFIELLREAE+EYGF H+KGIT PCGYSEFERI T+IRDC      
Sbjct: 66  LSRVLVPVVYFKHKLFIELLREAEEEYGFRHEKGITLPCGYSEFERIQTKIRDCGRSWPR 125

Query: 147 WRSSGSCCSPE-EEEDVWRL 162
           WRSSGSCCSPE ++ D+WRL
Sbjct: 126 WRSSGSCCSPEGDDVDLWRL 145

[Close]

BLAST of CmaCh17G004660.1 vs. NCBI nr
Match: XP_023006669.1 (auxin-responsive protein SAUR36-like [Cucurbita maxima])

HSP 1 Score: 349.4 bits (895), Expect = 1.8e-92
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 60
           MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR
Sbjct: 18  MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 77

Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120
           AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG
Sbjct: 78  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 137

Query: 121 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 168
           ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR
Sbjct: 138 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 184

[Close]

BLAST of CmaCh17G004660.1 vs. NCBI nr
Match: KAG6575207.1 (Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.0 bits (837), Expect = 9.4e-86
Identity = 159/167 (95.21%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 60
           MRKLRGFKLRKR VLFSRWLCRNIRPATRYYRLSQED SP+PKLSSRLLSW RGLSFLRR
Sbjct: 1   MRKLRGFKLRKRLVLFSRWLCRNIRPATRYYRLSQEDLSPQPKLSSRLLSWSRGLSFLRR 60

Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120
           AEPV+EK NPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG
Sbjct: 61  AEPVREKRNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120

Query: 121 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 168
           ITFPCGYSEFERILTRIRDCR+WRSSGSCCSP EEEDVWRLEARLRR
Sbjct: 121 ITFPCGYSEFERILTRIRDCRHWRSSGSCCSP-EEEDVWRLEARLRR 166

[Close]

BLAST of CmaCh17G004660.1 vs. NCBI nr
Match: XP_022959278.1 (auxin-responsive protein SAUR36-like [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 60
           MRKLRGFKLRKR VLFSRWLCRNIRPATRYYRLSQEDSSPE KLSSRLLSW RGLSFLRR
Sbjct: 1   MRKLRGFKLRKRLVLFSRWLCRNIRPATRYYRLSQEDSSPELKLSSRLLSWSRGLSFLRR 60

Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120
           AEPV+EK NPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG
Sbjct: 61  AEPVREKRNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120

Query: 121 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 168
           ITFPCGYSEFERILTRIRDCR+WRSSGSCCSP EEEDVWRLEARLRR
Sbjct: 121 ITFPCGYSEFERILTRIRDCRHWRSSGSCCSP-EEEDVWRLEARLRR 166

[Close]

BLAST of CmaCh17G004660.1 vs. NCBI nr
Match: KAG7013771.1 (Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 4.6e-85
Identity = 159/167 (95.21%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 60
           MRKLRGFKLRKR VLFSRWLCRNIRPATRYYRL QEDSSPE KLSSRLLSW RGLSFLRR
Sbjct: 1   MRKLRGFKLRKRLVLFSRWLCRNIRPATRYYRLRQEDSSPELKLSSRLLSWSRGLSFLRR 60

Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120
           AEPV+EK NPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG
Sbjct: 61  AEPVREKRNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120

Query: 121 ITFPCGYSEFERILTRIRDCRYWRSSGSCCSPEEEEDVWRLEARLRR 168
           ITFPCGYSEFERILTRIRDCR+WRSSGSCCSP EEEDVWRLEARLRR
Sbjct: 121 ITFPCGYSEFERILTRIRDCRHWRSSGSCCSP-EEEDVWRLEARLRR 166

[Close]

BLAST of CmaCh17G004660.1 vs. NCBI nr
Match: XP_023548343.1 (auxin-responsive protein SAUR36-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72
Identity = 139/151 (92.05%), Postives = 140/151 (92.72%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPKLSSRLLSWRRGLSFLRR 60
           MRKLRGFKLRKR VLFSRWL  NIRP TRYYRLSQEDSS EPKLSSRLLSW   LSFLRR
Sbjct: 1   MRKLRGFKLRKRLVLFSRWLWGNIRPVTRYYRLSQEDSSLEPKLSSRLLSWSHRLSFLRR 60

Query: 61  AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120
           AE V+EK NPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG
Sbjct: 61  AESVREKPNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKG 120

Query: 121 ITFPCGYSEFERILTRIRDCRYWRSSGSCCS 152
           ITFPCGYSEFERILTRIRDCR WRSSGSCCS
Sbjct: 121 ITFPCGYSEFERILTRIRDCRQWRSSGSCCS 151

[Close]

BLAST of CmaCh17G004660.1 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 138.7 bits (348), Expect = 4.4e-33
Identity = 77/169 (45.56%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIR-PATRYYRLSQEDSSPEPKLSSRLLSWRRGLS--- 60
           MRKLRG K+R+     SRW+ R I+   +RY RLS      +P+  ++L+SW R L+   
Sbjct: 1   MRKLRGIKIRRPIKQISRWILRRIKIRRSRYTRLSPNRPVCKPRAITKLISWGRSLTSHS 60

Query: 61  --FLRR-----------AEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFI 120
             F+              EP++EK +PVPKG  AVY+G+  G+F RVLVP+VYF H LF 
Sbjct: 61  ARFIGSKCSNSGYIPIGQEPIREKPDPVPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFG 120

Query: 121 ELLREAEDEYGFEHKKGITFPCGYSEFERILTRIRDCRYWRSSGSCCSP 153
           ELLREAE+E+GF  + GIT PC YS+F+R+ TRI        SG C  P
Sbjct: 121 ELLREAEEEFGFSQEGGITIPCPYSDFKRVQTRIES-----GSGFCKFP 164

[Close]

BLAST of CmaCh17G004660.1 vs. TAIR 10
Match: AT2G45210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-26
Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIR-PATRYYRL-SQEDSSPEPKLSSRLLSWRRGL--S 60
           MRK+ GF++ +R    SRW+ R  R   + Y R+ S + +    +  ++L SW + L  S
Sbjct: 1   MRKIIGFRIGRR---VSRWIFRKTRIQRSGYNRIHSTQQACMLMRPLAKLKSWGQRLKQS 60

Query: 61  FLRRAE------PV-QEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREA 120
           F RR+       PV  +K +PVP+G LA+YVG+  G+  RVLVP+VYF H LF ELLREA
Sbjct: 61  FRRRSTRRSAYIPVDHKKADPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREA 120

Query: 121 EDEYGFEHKKGITFPCGYSEFERILTRI 138
           E EYGF H+ GIT PC YS+FER+ TRI
Sbjct: 121 EKEYGFCHEGGITIPCLYSDFERVKTRI 145

[Close]

BLAST of CmaCh17G004660.1 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-19
Identity = 62/147 (42.18%), Postives = 82/147 (55.78%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRNIRPATRYYRLSQEDSSPEPK---LSSRLLSWRRGLSF 60
           M++LRGFK+  RFV   +W+ R+ R  T   +      +P  K   L+ R L  RRG + 
Sbjct: 1   MKRLRGFKIGHRFVKIFKWIIRSRRNQTGKRQCLTGILNPVTKIYSLARRCL--RRGANR 60

Query: 61  L-RRAEPVQ------EKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAE 120
           L    +P Q       K   VP+G L V+VGESG +  RV+VPV+YF H LF ELL +AE
Sbjct: 61  LCGGMKPGQTRLGNEPKTPTVPRGHLVVHVGESGEDTRRVVVPVIYFNHPLFGELLEQAE 120

Query: 121 DEYGFEHKKGITFPCGYSEFERILTRI 138
             YGFE    I  PC  S+FE++  RI
Sbjct: 121 RVYGFEQPGRIMIPCRVSDFEKVQMRI 145

[Close]

BLAST of CmaCh17G004660.1 vs. TAIR 10
Match: AT4G12410.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 88.6 bits (218), Expect = 5.2e-18
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 1   MRKLRGFKLRKRFVLFSRWLCRN------IRPATRYYRLSQEDSSPEPKLSSRLLSWRRG 60
           M+++RGFK+  RFV   +W+ RN        P T    L++  S    +L         G
Sbjct: 1   MKRVRGFKIGHRFVKIFKWIPRNRCPTRITNPVTGIRSLARCLSRGAKRLCGGSKK-NPG 60

Query: 61  LSFLRRAEPVQEKCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYG 120
            + +R  +  ++    VP+G L V+VGES  +  RV+VPV+YF H LF ELL +AE  +G
Sbjct: 61  QNQIRLGKDPKKSNRVVPRGHLVVHVGESDDDTRRVVVPVIYFNHPLFGELLEQAERVHG 120

Query: 121 FEHKKGITFPCGYSEFERILTRIRDCRYWRSSGS 149
           F+    IT PC  S+FE++  RI    + R   S
Sbjct: 121 FDQPGRITIPCRVSDFEKVQLRIAAWDHCRRKNS 153

[Close]

BLAST of CmaCh17G004660.1 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 67  KCNPVPKGQLAVYVGESGGEFSRVLVPVVYFKHRLFIELLREAEDEYGFEHKKGITFPCG 126
           K   VPKG LA+ VG  G E  R +VPV+YF H LF++LL+EAEDEYGF+ K  IT PC 
Sbjct: 20  KVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCH 79

Query: 127 YSEFERI 134
             EF  +
Sbjct: 80  VEEFRYV 86

The following BLAST results are available for this feature:

BLAST of CmaCh17G004660.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22150	3.3e-25	47.97	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
Q9ZUZ3	1.5e-14	55.22	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 S...	[more]
O65695	3.9e-10	44.00	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q41220	5.1e-10	36.90	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 S...	[more]
P33080	7.4e-09	38.75	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CmaCh17G004660.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L2T6	8.5e-93	100.00	auxin-responsive protein SAUR36-like OS=Cucurbita maxima OX=3661 GN=LOC111499325...	[more]
A0A6J1H5H7	5.9e-86	95.81	auxin-responsive protein SAUR36-like OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A1S3C755	7.3e-60	72.51	auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103497676 PE=...	[more]
A0A0A0K7J7	5.8e-57	71.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007440 PE=3 SV=1	[more]
A0A5D3CQF2	6.8e-50	73.57	Auxin-responsive protein SAUR36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CmaCh17G004660.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006669.1	1.8e-92	100.00	auxin-responsive protein SAUR36-like [Cucurbita maxima]	[more]
KAG6575207.1	9.4e-86	95.21	Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022959278.1	1.2e-85	95.81	auxin-responsive protein SAUR36-like [Cucurbita moschata]	[more]
KAG7013771.1	4.6e-85	95.21	Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_023548343.1	2.6e-72	92.05	auxin-responsive protein SAUR36-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh17G004660.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60690.1	4.4e-33	45.56	SAUR-like auxin-responsive protein family	[more]
AT2G45210.1	2.3e-26	47.97	SAUR-like auxin-responsive protein family	[more]
AT4G22620.1	2.8e-19	42.18	SAUR-like auxin-responsive protein family	[more]
AT4G12410.1	5.2e-18	35.71	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.1e-15	55.22	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 59..136 e-value: 1.2E-18 score: 67.1
None	No IPR available	PANTHER	PTHR31374:SF304	SMALL AUXIN-UP RNA-RELATED	coord: 1..145
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 1..145

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh17G004660	CmaCh17G004660	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004660.1:exon:2499	CmaCh17G004660.1:exon:2499	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004660.1:cds	CmaCh17G004660.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh17G004660.1	CmaCh17G004660.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin