CmaCh16G005560.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G005560.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	COP1-interactive protein 1 isoform X1
Location	Cma_Chr16: 2856934 .. 2860309 (-)
Sequence length	2700
RNA-Seq Expression	CmaCh16G005560.1
Synteny	CmaCh16G005560.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAAGCACCGGTTCAGGAATTCTTTGAAGTCTCTATTTGGGAGTTACCTTGATCCAGAAACAAATGAACGGCTCAAAGGAAATAAATCAGGTAATTAAGGGATATTTTCCTTTTGATTTCTGTAGTTTTTGGTGCTTTTCTCCCATTATCTTACATTTTACATTTTTGATGCAGTTATCGAGGACAAGGTGAATAAAATTAGACAACTCATAAAAGGTGAAGATCTAGGAGTAGAAGACCACGACCAATCTGAAATTCGCAAGAAACAGTCCATTGATGAATTAATTGATGATTTCCTTAACGTTTACCAAGCCCTCTATGAACAATACGACAGCCTAACCGGAGAGTTGAGAAGAAAATTTCAAAAAAGAAGAGAAAAGGAAAGCTCTTCATCTAGTTCATCCGACTCGGATTCAGATGATTCTTCAAAGAAAAAGGTCAGCAAAGATGATCGAGGGTTGGAGAGAGAATTCCAAGAAGTTGGTGAAATCAAGCAGGAACTTGACGCAGCACTTTCAGAAGTAGCCGATTTGAAAAGGATATTGGCAACTACAAGTAAAGAACATGAATCCCTAAATTCAGAACATCTGACAGCTTTAAGTAAGCTACAAGAAGCAGATGAAATTATTAGAGATTTTAAGGTTGAAGCTGAAACTTGGGACTCTCAGAAGTCTAAATTTCAGCTTGAAATCGAAGAACTGAATCTGGCGTTAAGTAATGCTGGTAGGAATGAATCTGAATTGAATGAGAGATTAAAAGGTATGGCAACAGAGATGAATAACTACATTGAAGAAAAGGAGACTGCAAGGAGGAAGATTGAAGAAGGGGAAAAAACTATAGATGAATCGAAGGCTTTGGCTGATCAGTTGAAGGAGAAGTTGTCAGCCACAATGGAAGAAAAGGAAGCTCTGAACTCACAGCACTTGAAAACTTTAAGTAGGGTACATGAAGCATATATGATCACAAGAGATTTGAAGGTTGAATCAGAAACCTGGGGTGGTGAAAAATCTAAATTTCTTCTCGAGATTGAAGAGCTGAATCAGAAACTGGGTGCTGCCGGAAAATTGGAAGCGCAATTGAATGAGAGGTTGAAGGATATTGGAATTGAAAACGAATATTTGATCAGGGAAAAGGAATCTGCGCAGAGGACGATTGAAGAGATGAGTCAGAGGCTGAGCAATGCTGTTAAGATAGAAGCAGAACTCAGTGGAAGATTGAAAGATATTGAAACTGAGAAAGATGGGTTGATCAAGGAAAAGGAGATTGCATGGAAGGAGATTGAACAAGGTACACGAGTTAGAGAAGAATTAAACGCCATGGTTGATCAACTGAACAGTCAATTGACAATTACAGTAGAAGAAAAGAAATCTCTCAGTTTACAACTTGAAAAGGAGAAAGTTGAGTTGTTGAGATCAATTGCTGATCATCAAAGAAATTTGAAGGAACACGAGGATGCATACAAGAAGCTAAATGATGAGTTTCAAGAATGTAAGCTAAAGCTTGATAATGCAGAAATGAAGACGGCAGAAATGAGTCGAGAGTTTCATAATGACATTAGATCAAAGGAGCAAGTGAAAGAGGACCTGGAGGTAATGGTTGAGGATCTTAAAAGAGAGCTGGAAGTAAAAAGTGATGAGATAAATAGCCTAGTTGAAAACGCTCGCACGATCGAAGTCAAGCTTCGGTTATCAAACCAGAAGCTTCGTGTTACAGAACAACTATTAACTGAAAAGGAAGAGATTTTTCGGAAAGCTGAATTGAAGTATCAAAAGGAACGGAAATTGCTTGAGGAAAGAATTCATGGACTATCTGCAACAGTTGTTGCTAACAAAGTAACGTATCAAAAGACGATATCAACTGTTTCAGAAAACATTAACAGTAACCTCTCCCAACTGGAATGTGTCATCAGGAAATTCATATTGGAGCATGCAAAGTATGAGAAGTGTGTTATGGATACATCCCGCGATCTACGGCTTACAAAGAGTTGGGTTTCAAATGCTATTGAAGAAACAGAAGGCCTAAAAAAAGAGGTGGCAGACCTTGGGAAACAACTTGAAGATAAGAAAGAGAGGGAATCCATATTAGTAAAACAGGTTGAGAAGTTGGAGATTAAGGCCAACAAGGAAGGATCTGAGAAGGATGGGTTGGTTGAAGCAATCCACGAACTTGAAAAGAGACAGAGAGAATTGGAGAAGATGATGGAAGAGAAGAATGAAGGTATGGTGGGTCTGAAAGAGGAGAAGAAAGAAGCGATAAGACAACTTTGCATGTTGATCGAGTATCATCGGGACCGCTATGATTTTCTCAAGGATGAGGTCTTGAAGTTGAATGTTAAAGGAGGCCAGAGTGTAAGATAGTAAGTAAGTCAATCACCACTCCCTTTACTACTCATTTCTTTTTATTCTTTGTTTGATTGATGAATCTATTAGGAATTATGAACCTCATAATCATATGACGTTGCCTAATTTGAGCATAAGTTTTCATGATTTTGCTTTTGGTTTTTCCAAAAGGCCTCATACCAACGGGGATGTATTCCTTGTTTATAAACCCATGATCAATCCTTTAATTAGTTGATGTTGGACTCCTCTCCCAACAATCCTCAACAAAGTCTTGGACGTAGTTAATTAGTGAATCTCTTGTCCACCTTTTTTTCTTTTGTTATTTTAATGCATATTGCTTTCTTTTGTTGCATGCAACTAATTGATTGATTGACTTTGTCTGGTTCCTTTGTTAATATGTTTCTGAATCTTTTCTAGGCAGTCATTAGCCACTCAGGGATAATTGTAGAAAGTTGTTTCTTAGCTGATCCATCAATTAAGATATGACTTTCCTTCGACTTTTAGAATCTTATTCTTTAATCTTTAGGCTGTAGTGATTACAGGATTGCTTGTTTTTGTTTGTTGTTTTTTATTTGATTATAGATATTTTAATGTCTTTTATTTTCCTTTGTAGGTATTTTCTAAAAAAGAATGGAGGTCATTCGAGTAATAAATCAAAATTGTAGAAAAACGACAACGGTAAGGGTATTTTAGGATCCTTTTCTCTAAAGAGCAAATTCCCTATATTCAAAAGAGAATTTGACGTTGTTGTGTAGCTAGGTAGATGTAAAATTGCAAAATAGATCCCTAATTTTGATTAGGGTATATGAGATCTTCGTGTAGAAATATAAAAAATTTAAATGTACTAGAAGAAGACGTTAATTTAATTACTTGAGATCTAGGCCTAGCCGTGTCGACAAAGCTTTATAGAGTTTGAGAAAGACTTTGAGAAATTATTTCTTTTTTCTTTTGTACATTTATATTTGTATTATAGGTTTAGGGAACGATAAATTTTATTTTTTCATGTCAATGAATGACATTTAGATATTTTTAT

mRNA sequence

ATGACAAAGCACCGGTTCAGGAATTCTTTGAAGTCTCTATTTGGGAGTTACCTTGATCCAGAAACAAATGAACGGCTCAAAGGAAATAAATCAGTTATCGAGGACAAGGTGAATAAAATTAGACAACTCATAAAAGGTGAAGATCTAGGAGTAGAAGACCACGACCAATCTGAAATTCGCAAGAAACAGTCCATTGATGAATTAATTGATGATTTCCTTAACGTTTACCAAGCCCTCTATGAACAATACGACAGCCTAACCGGAGAGTTGAGAAGAAAATTTCAAAAAAGAAGAGAAAAGGAAAGCTCTTCATCTAGTTCATCCGACTCGGATTCAGATGATTCTTCAAAGAAAAAGGTCAGCAAAGATGATCGAGGGTTGGAGAGAGAATTCCAAGAAGTTGGTGAAATCAAGCAGGAACTTGACGCAGCACTTTCAGAAGTAGCCGATTTGAAAAGGATATTGGCAACTACAAGTAAAGAACATGAATCCCTAAATTCAGAACATCTGACAGCTTTAAGTAAGCTACAAGAAGCAGATGAAATTATTAGAGATTTTAAGGTTGAAGCTGAAACTTGGGACTCTCAGAAGTCTAAATTTCAGCTTGAAATCGAAGAACTGAATCTGGCGTTAAGTAATGCTGGTAGGAATGAATCTGAATTGAATGAGAGATTAAAAGGTATGGCAACAGAGATGAATAACTACATTGAAGAAAAGGAGACTGCAAGGAGGAAGATTGAAGAAGGGGAAAAAACTATAGATGAATCGAAGGCTTTGGCTGATCAGTTGAAGGAGAAGTTGTCAGCCACAATGGAAGAAAAGGAAGCTCTGAACTCACAGCACTTGAAAACTTTAAGTAGGGTACATGAAGCATATATGATCACAAGAGATTTGAAGGTTGAATCAGAAACCTGGGGTGGTGAAAAATCTAAATTTCTTCTCGAGATTGAAGAGCTGAATCAGAAACTGGGTGCTGCCGGAAAATTGGAAGCGCAATTGAATGAGAGGTTGAAGGATATTGGAATTGAAAACGAATATTTGATCAGGGAAAAGGAATCTGCGCAGAGGACGATTGAAGAGATGAGTCAGAGGCTGAGCAATGCTGTTAAGATAGAAGCAGAACTCAGTGGAAGATTGAAAGATATTGAAACTGAGAAAGATGGGTTGATCAAGGAAAAGGAGATTGCATGGAAGGAGATTGAACAAGGTACACGAGTTAGAGAAGAATTAAACGCCATGGTTGATCAACTGAACAGTCAATTGACAATTACAGTAGAAGAAAAGAAATCTCTCAGTTTACAACTTGAAAAGGAGAAAGTTGAGTTGTTGAGATCAATTGCTGATCATCAAAGAAATTTGAAGGAACACGAGGATGCATACAAGAAGCTAAATGATGAGTTTCAAGAATGTAAGCTAAAGCTTGATAATGCAGAAATGAAGACGGCAGAAATGAGTCGAGAGTTTCATAATGACATTAGATCAAAGGAGCAAGTGAAAGAGGACCTGGAGGTAATGGTTGAGGATCTTAAAAGAGAGCTGGAAGTAAAAAGTGATGAGATAAATAGCCTAGTTGAAAACGCTCGCACGATCGAAGTCAAGCTTCGGTTATCAAACCAGAAGCTTCGTGTTACAGAACAACTATTAACTGAAAAGGAAGAGATTTTTCGGAAAGCTGAATTGAAGTATCAAAAGGAACGGAAATTGCTTGAGGAAAGAATTCATGGACTATCTGCAACAGTTGTTGCTAACAAAGTAACGTATCAAAAGACGATATCAACTGTTTCAGAAAACATTAACAGTAACCTCTCCCAACTGGAATGTGTCATCAGGAAATTCATATTGGAGCATGCAAAGTATGAGAAGTGTGTTATGGATACATCCCGCGATCTACGGCTTACAAAGAGTTGGGTTTCAAATGCTATTGAAGAAACAGAAGGCCTAAAAAAAGAGGTGGCAGACCTTGGGAAACAACTTGAAGATAAGAAAGAGAGGGAATCCATATTAGTAAAACAGGTTGAGAAGTTGGAGATTAAGGCCAACAAGGAAGGATCTGAGAAGGATGGGTTGGTTGAAGCAATCCACGAACTTGAAAAGAGACAGAGAGAATTGGAGAAGATGATGGAAGAGAAGAATGAAGGTATGGTGGGTCTGAAAGAGGAGAAGAAAGAAGCGATAAGACAACTTTGCATGTTGATCGAGTATCATCGGGACCGCTATGATTTTCTCAAGGATGAGGTCTTGAAGTTGAATGTTAAAGGAGGCCAGAGTGTAAGATAGTAAGTATTTTCTAAAAAAGAATGGAGGTCATTCGAGTAATAAATCAAAATTGTAGAAAAACGACAACGGTAAGGGTATTTTAGGATCCTTTTCTCTAAAGAGCAAATTCCCTATATTCAAAAGAGAATTTGACGTTGTTGTGTAGCTAGGTAGATGTAAAATTGCAAAATAGATCCCTAATTTTGATTAGGGTATATGAGATCTTCGTGTAGAAATATAAAAAATTTAAATGTACTAGAAGAAGACGTTAATTTAATTACTTGAGATCTAGGCCTAGCCGTGTCGACAAAGCTTTATAGAGTTTGAGAAAGACTTTGAGAAATTATTTCTTTTTTCTTTTGTACATTTATATTTGTATTATAGGTTTAGGGAACGATAAATTTTATTTTTTCATGTCAATGAATGACATTTAGATATTTTTAT

Coding sequence (CDS)

ATGACAAAGCACCGGTTCAGGAATTCTTTGAAGTCTCTATTTGGGAGTTACCTTGATCCAGAAACAAATGAACGGCTCAAAGGAAATAAATCAGTTATCGAGGACAAGGTGAATAAAATTAGACAACTCATAAAAGGTGAAGATCTAGGAGTAGAAGACCACGACCAATCTGAAATTCGCAAGAAACAGTCCATTGATGAATTAATTGATGATTTCCTTAACGTTTACCAAGCCCTCTATGAACAATACGACAGCCTAACCGGAGAGTTGAGAAGAAAATTTCAAAAAAGAAGAGAAAAGGAAAGCTCTTCATCTAGTTCATCCGACTCGGATTCAGATGATTCTTCAAAGAAAAAGGTCAGCAAAGATGATCGAGGGTTGGAGAGAGAATTCCAAGAAGTTGGTGAAATCAAGCAGGAACTTGACGCAGCACTTTCAGAAGTAGCCGATTTGAAAAGGATATTGGCAACTACAAGTAAAGAACATGAATCCCTAAATTCAGAACATCTGACAGCTTTAAGTAAGCTACAAGAAGCAGATGAAATTATTAGAGATTTTAAGGTTGAAGCTGAAACTTGGGACTCTCAGAAGTCTAAATTTCAGCTTGAAATCGAAGAACTGAATCTGGCGTTAAGTAATGCTGGTAGGAATGAATCTGAATTGAATGAGAGATTAAAAGGTATGGCAACAGAGATGAATAACTACATTGAAGAAAAGGAGACTGCAAGGAGGAAGATTGAAGAAGGGGAAAAAACTATAGATGAATCGAAGGCTTTGGCTGATCAGTTGAAGGAGAAGTTGTCAGCCACAATGGAAGAAAAGGAAGCTCTGAACTCACAGCACTTGAAAACTTTAAGTAGGGTACATGAAGCATATATGATCACAAGAGATTTGAAGGTTGAATCAGAAACCTGGGGTGGTGAAAAATCTAAATTTCTTCTCGAGATTGAAGAGCTGAATCAGAAACTGGGTGCTGCCGGAAAATTGGAAGCGCAATTGAATGAGAGGTTGAAGGATATTGGAATTGAAAACGAATATTTGATCAGGGAAAAGGAATCTGCGCAGAGGACGATTGAAGAGATGAGTCAGAGGCTGAGCAATGCTGTTAAGATAGAAGCAGAACTCAGTGGAAGATTGAAAGATATTGAAACTGAGAAAGATGGGTTGATCAAGGAAAAGGAGATTGCATGGAAGGAGATTGAACAAGGTACACGAGTTAGAGAAGAATTAAACGCCATGGTTGATCAACTGAACAGTCAATTGACAATTACAGTAGAAGAAAAGAAATCTCTCAGTTTACAACTTGAAAAGGAGAAAGTTGAGTTGTTGAGATCAATTGCTGATCATCAAAGAAATTTGAAGGAACACGAGGATGCATACAAGAAGCTAAATGATGAGTTTCAAGAATGTAAGCTAAAGCTTGATAATGCAGAAATGAAGACGGCAGAAATGAGTCGAGAGTTTCATAATGACATTAGATCAAAGGAGCAAGTGAAAGAGGACCTGGAGGTAATGGTTGAGGATCTTAAAAGAGAGCTGGAAGTAAAAAGTGATGAGATAAATAGCCTAGTTGAAAACGCTCGCACGATCGAAGTCAAGCTTCGGTTATCAAACCAGAAGCTTCGTGTTACAGAACAACTATTAACTGAAAAGGAAGAGATTTTTCGGAAAGCTGAATTGAAGTATCAAAAGGAACGGAAATTGCTTGAGGAAAGAATTCATGGACTATCTGCAACAGTTGTTGCTAACAAAGTAACGTATCAAAAGACGATATCAACTGTTTCAGAAAACATTAACAGTAACCTCTCCCAACTGGAATGTGTCATCAGGAAATTCATATTGGAGCATGCAAAGTATGAGAAGTGTGTTATGGATACATCCCGCGATCTACGGCTTACAAAGAGTTGGGTTTCAAATGCTATTGAAGAAACAGAAGGCCTAAAAAAAGAGGTGGCAGACCTTGGGAAACAACTTGAAGATAAGAAAGAGAGGGAATCCATATTAGTAAAACAGGTTGAGAAGTTGGAGATTAAGGCCAACAAGGAAGGATCTGAGAAGGATGGGTTGGTTGAAGCAATCCACGAACTTGAAAAGAGACAGAGAGAATTGGAGAAGATGATGGAAGAGAAGAATGAAGGTATGGTGGGTCTGAAAGAGGAGAAGAAAGAAGCGATAAGACAACTTTGCATGTTGATCGAGTATCATCGGGACCGCTATGATTTTCTCAAGGATGAGGTCTTGAAGTTGAATGTTAAAGGAGGCCAGAGTGTAAGATAG

Protein sequence

MTKHRFRNSLKSLFGSYLDPETNERLKGNKSVIEDKVNKIRQLIKGEDLGVEDHDQSEIRKKQSIDELIDDFLNVYQALYEQYDSLTGELRRKFQKRREKESSSSSSSDSDSDDSSKKKVSKDDRGLEREFQEVGEIKQELDAALSEVADLKRILATTSKEHESLNSEHLTALSKLQEADEIIRDFKVEAETWDSQKSKFQLEIEELNLALSNAGRNESELNERLKGMATEMNNYIEEKETARRKIEEGEKTIDESKALADQLKEKLSATMEEKEALNSQHLKTLSRVHEAYMITRDLKVESETWGGEKSKFLLEIEELNQKLGAAGKLEAQLNERLKDIGIENEYLIREKESAQRTIEEMSQRLSNAVKIEAELSGRLKDIETEKDGLIKEKEIAWKEIEQGTRVREELNAMVDQLNSQLTITVEEKKSLSLQLEKEKVELLRSIADHQRNLKEHEDAYKKLNDEFQECKLKLDNAEMKTAEMSREFHNDIRSKEQVKEDLEVMVEDLKRELEVKSDEINSLVENARTIEVKLRLSNQKLRVTEQLLTEKEEIFRKAELKYQKERKLLEERIHGLSATVVANKVTYQKTISTVSENINSNLSQLECVIRKFILEHAKYEKCVMDTSRDLRLTKSWVSNAIEETEGLKKEVADLGKQLEDKKERESILVKQVEKLEIKANKEGSEKDGLVEAIHELEKRQRELEKMMEEKNEGMVGLKEEKKEAIRQLCMLIEYHRDRYDFLKDEVLKLNVKGGQSVR

Homology

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BLAST of CmaCh16G005560.1 vs. ExPASy Swiss-Prot
Match: F4JZY1 (COP1-interactive protein 1 OS=Arabidopsis thaliana OX=3702 GN=CIP1 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.6e-42
Identity = 217/787 (27.57%), Postives = 388/787 (49.30%), Query Frame = 0


Query: 1   MTKHRFRNSLKSLFGSYLDPETNERLKGNKSVIEDKVNKIRQLIKGEDLGVEDHDQSEIR 60
           M KH+FR +LKS F  + D E  E LKG K+ I++KVNKI  +++  D+   + D+S   
Sbjct: 1   MKKHKFRETLKSFFEPHFDHEKGEMLKGTKTEIDEKVNKILGMVESGDV---NEDES--- 60

Query: 61  KKQSIDELIDDFLNVYQALYEQYDSLTGELRRKFQKRREKESSSSSSSDSDSDDSSKKKV 120
            +Q + +L+ +F + YQ+LY QYD LTGE+R+K   +   ESSSSSSSDSDSD SSK+KV
Sbjct: 61  NRQVVADLVKEFYSEYQSLYRQYDDLTGEIRKKVNGK--GESSSSSSSDSDSDHSSKRKV 120

Query: 121 SKDDRG-LEREFQEV-GEIKQELDAALSEVADLKRILATTSKEHESLNSEHLTALSKLQE 180
            ++  G +E++ + V G +KQ+++AA  E+ADLK  L TT +E E+++SE   AL KL+E
Sbjct: 121 KRNGNGKVEKDVELVTGALKQQIEAANLEIADLKGKLTTTVEEKEAVDSELELALMKLKE 180

Query: 181 ADEIIRDFKVEAETWDSQKSKFQLEIEELNLALSNAGRNESELNERLKGMATEMNNYIEE 240
           ++EI    K+E E  + +KS    +  EL+  L  AG+ E++LN++L+ +  E +    E
Sbjct: 181 SEEISSKLKLETEKLEDEKSIALSDNRELHQKLEVAGKTETDLNQKLEDIKKERDELQTE 240

Query: 241 KETARRKIEEGEKTIDESKALADQLKEKLSATMEEKEALNSQHLKTLSRVHEAYMITRDL 300
           ++   ++ +E EK  ++ K  +DQLK++ S   ++ EA   +  +  S ++ A    + L
Sbjct: 241 RDNGIKRFQEAEKVAEDWKTTSDQLKDETSNLKQQLEASEQRVSELTSGMNSAEEENKSL 300

Query: 301 KVESETWGGEKSKFLLEIEELNQKLGAAGKLEAQLNERLKDIGIENEYLI-----REKES 360
            ++         +    I+EL  +LG       ++ E+ K+   E+  L+      E+ES
Sbjct: 301 SLKVSEISDVIQQGQTTIQELISELG-------EMKEKYKEKESEHSSLVELHKTHERES 360

Query: 361 AQRTIEEMSQRLSNAVKIEAELSGRLKDIETEKDGLIKEKEIAWKEIEQGTRVREELNAM 420
           + + ++E+   + ++ K+ A+ +  L + E EK  L ++      EI++     +EL + 
Sbjct: 361 SSQ-VKELEAHIESSEKLVADFTQSLNNAEEEKKLLSQKIAELSNEIQEAQNTMQELMSE 420

Query: 421 VDQLNSQLTITVEEKKSL--------------SLQLEKEKVELLRSIADHQRNLKEHEDA 480
             QL    ++   E  SL              + +LE +     + ++D   +LK  E+ 
Sbjct: 421 SGQLKESHSVKERELFSLRDIHEIHQRDSSTRASELEAQLESSKQQVSDLSASLKAAEEE 480

Query: 481 YKKLNDEFQECKLKLDN---------AEM-KTAEMSREFHNDIRSKEQVKE----DLEVM 540
            K ++ +  E   KL+          AE+ K  +  RE  +++ S  +V E    D  + 
Sbjct: 481 NKAISSKNVETMNKLEQTQNTIQELMAELGKLKDSHREKESELSSLVEVHETHQRDSSIH 540

Query: 541 VEDLKRELEVKSDEINSLVENARTIEVKLRLSNQKL-----RVTEQLLTEKEEIFRKAEL 600
           V++L+ ++E     +  L +     E + ++ +QK+      + E   T +E +    +L
Sbjct: 541 VKELEEQVESSKKLVAELNQTLNNAEEEKKVLSQKIAELSNEIKEAQNTIQELVSESGQL 600

Query: 601 KYQ---KERKLLEER-IHGLSATVVANKVTYQKTISTVSENINSNLSQLECVIRKFILEH 660
           K     K+R L   R IH           T+Q+  ST    + + L   E  I    ++ 
Sbjct: 601 KESHSVKDRDLFSLRDIH----------ETHQRESSTRVSELEAQLESSEQRISDLTVDL 660

Query: 661 AKYEKCVMDTSRDLRLTKSWVSNAIEETEGLKKEVAD-LGKQLEDKKERESILV------ 720
              E    + ++ +      + + +E+ +   KE+ D LG+  +  KE+ES L       
Sbjct: 661 KDAE----EENKAISSKNLEIMDKLEQAQNTIKELMDELGELKDRHKEKESELSSLVKSA 720

Query: 721 -KQVEKLEIKANKEGSEKDGLVEAIHELEKRQRELEKMMEEKNEGMVGLKEEKKEAIRQL 736
            +QV  ++   +    EK  L + I ++    +E +K ++E       LKE      R+L
Sbjct: 721 DQQVADMKQSLDNAEEEKKMLSQRILDISNEIQEAQKTIQEHMSESEQLKESHGVKEREL 757

[Close]

BLAST of CmaCh16G005560.1 vs. ExPASy Swiss-Prot
Match: P25386 (Intracellular protein transport protein USO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=USO1 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 2.0e-05
Identity = 167/795 (21.01%), Postives = 344/795 (43.27%), Query Frame = 0


Query: 22   TNERLKGNKSVIEDKVNKIRQLIKGEDLGVEDHDQSEIRKKQSIDELIDDFLNVYQALYE 81
            ++  LK N S++E ++  +R  +   D   +  D  E + K++   L    L     +++
Sbjct: 784  SHSSLKENFSILETELKNVRDSL---DEMTQLRDVLETKDKENQTAL----LEYKSTIHK 843

Query: 82   QYDSL----TGELRRKFQKRREKESSSSSSSDSDSDDSSKKKVSKDDRGLERE------- 141
            Q DS+     G      QK++ ++  +    D  +     + V ++ + L++E       
Sbjct: 844  QEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFALSREMQAVEENCKNLQKEKDKSNVN 903

Query: 142  -FQEVGEIKQELDAALSEV-------ADLKRILATTSKEHESLNSEHLTALSKLQEADEI 201
              +E   +K+++ A ++E+        ++K      SKE E ++ E +   S+ Q  D +
Sbjct: 904  HQKETKSLKEDIAAKITEIKAINENLEEMKIQCNNLSKEKEHISKELVEYKSRFQSHDNL 963

Query: 202  IRDFKVEAETWDSQKSKFQLEIEELNLALSNAGRNE-----SELNERLKGMATEMNNYIE 261
            +     + ++  +     Q E E L  A+  + +NE     S L  ++  M+ E  N+  
Sbjct: 964  VAKLTEKLKSLANNYKDMQAENESLIKAVEES-KNESSIQLSNLQNKIDSMSQEKENFQI 1023

Query: 262  EKETARRKIEEGEKTIDE-----------SKALADQLKEKLSATMEEKEALNSQHLKTLS 321
            E+ +  + IE+ +KTI +           S +  D+ + ++S   E+ E   + + + ++
Sbjct: 1024 ERGSIEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQISLLKEKLETATTANDENVN 1083

Query: 322  RVHEAYMITRDLKVESETWGGEKSKFLLEIEELNQKLGAAGKLEAQLNERLKDIGIENEY 381
            ++ E      +L+ E   +   K+       EL  KL  + K        LK++    E+
Sbjct: 1084 KISELTKTREELEAELAAYKNLKN-------ELETKLETSEK-------ALKEVKENEEH 1143

Query: 382  LIREKESAQRTIEEMSQRLSNAVKIEAELSGRLKDIETEKDGLIKEKEIAWKEIEQGTRV 441
            L  EK   ++   E  Q+L++       L   L+ +E E + L  + +   K  EQ    
Sbjct: 1144 LKEEKIQLEKEATETKQQLNS-------LRANLESLEKEHEDLAAQLK---KYEEQIANK 1203

Query: 442  REELNAMVDQLNSQLTITVEEKKSLSL---QLEKEKVELLRSIADHQRNLKEHEDAYKKL 501
              + N  + QLN ++T T +E +S+     +LE E V+ ++S ++ Q NLK+ E     L
Sbjct: 1204 ERQYNEEISQLNDEITSTQQENESIKKKNDELEGE-VKAMKSTSEEQSNLKKSE--IDAL 1263

Query: 502  NDEFQECKLKLDNAEMKTAEMSREFHNDIRSKEQVKEDL---EVMVEDLKRELEVKSDEI 561
            N + +E K K +  E    E  +   ++    ++++++    E  V +L+ +L+   D+ 
Sbjct: 1264 NLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKN 1323

Query: 562  NSLVE------------NARTIEVKLRLSNQKLRVTEQLLTEKEEIFRKAELKYQKERKL 621
            +  +E            +A+T E+K++L  +K+    +   + E    + +    +ERK 
Sbjct: 1324 SKYLELQKESEKIKEELDAKTTELKIQL--EKITNLSKAKEKSESELSRLKKTSSEERKN 1383

Query: 622  LEERIHGLSATVVANKVTYQKT-------ISTVSENINSNLSQLECVIRKFILEHAKYEK 681
             EE++  L   +      ++K         ST+++  +  ++ LE  + +   E+    K
Sbjct: 1384 AEEQLEKLKNEIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKAK 1443

Query: 682  CVMDTSRDLRLTKSWVSNAIEETEGLKKEVADLGKQLEDKKERESILVKQVEKLEIKANK 741
             + +T  +L          +EE +   K + D     +DK  R    +  +E+ + K + 
Sbjct: 1444 EIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDKITRNDEKLLSIER-DNKRDL 1503

Query: 742  EGSEKDGLVEAIHELEKRQRELEKMMEEKNEGMVGLKEEKKEAIRQLCMLIEYHRDRYDF 757
            E S K+ L  A     K +  L+K+ EE ++    L E+ KE +++L   IE +      
Sbjct: 1504 E-SLKEQLRAAQESKAKVEEGLKKLEEESSKEKAEL-EKSKEMMKKLESTIESNETELKS 1538

[Close]

BLAST of CmaCh16G005560.1 vs. ExPASy Swiss-Prot
Match: O67124 (Probable DNA double-strand break repair Rad50 ATPase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=rad50 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.7e-05
Identity = 125/559 (22.36%), Postives = 256/559 (45.80%), Query Frame = 0


Query: 203 EIEELNLALSNAGRNESELNERLKGMATEMNNYI-EEKETARRKIEEGEKTIDESKALAD 262
           E+E++    S   +N     E LK     + +Y   +KE   + ++  E+ + E K   +
Sbjct: 165 ELEKVRQLASETFKNLEGKREALKKEYELLKDYTPTKKEVLEKTLKNLEEELKELKETEE 224

Query: 263 QLKEKLSATMEEKEALNSQHLKTLSRVHEAYMITRDL-----KVESETWGGEKSKFLLEI 322
           +L+++L    EEK++L  +  + ++++ E   + +++     K+E              I
Sbjct: 225 KLRQELKKA-EEKDSLERELSQVVTKLKELENLEKEVEKLREKLEFSRKVAPYVPIAKRI 284

Query: 323 EELNQKLGAAGKLEAQLNERLKDIGIENEYLIREKESAQRTIEEMSQRLSNAVKIEAELS 382
           EE+++KL    +L+ + N+  K++ +  + L   +E   R IE   ++     + E EL 
Sbjct: 285 EEIDKKL---TELKVRKNKLTKELAVLKDELSFAQEELNR-IEAEKEKFKEEKEREKELE 344

Query: 383 GRLKDIETEKDGLIKEKEIAWKEIEQGTRVREELNAMVDQLNSQLTITVEEKKSLSLQLE 442
            RLK ++  K+ ++KE       +++  R  E+     + L+ +    VE+ K L  + E
Sbjct: 345 HRLKKLQEIKE-ILKELSQLSSSLKEKEREYEQAKQEFEDLSER----VEKGKKLVAETE 404

Query: 443 KEKVELLRSIADHQR--NLKEHEDAYKKLNDEFQECKLKLDNAEMKTAEMSREFHNDIRS 502
            EK+E ++ +   +   +LK  E    +L  + +E K K    E +   +++++    + 
Sbjct: 405 -EKLEKIKELFSEEEYTSLKMKERLLVELQRKLKELKEK----EGQLENLTQKYKEKKKV 464

Query: 503 KEQVKEDLEVMVEDLK-RELEVKSDEINSLVENARTIEVKLRLSNQKLRVTEQLLTEK-E 562
            E+V  +L+ +  +LK REL   +  + S +    T  V   +   K    E +  E   
Sbjct: 465 HEKVLNELKELERELKERELHYHAHMVASYLSPGDTCPVCGGIYRGK--ALENVDAEGIS 524

Query: 563 EIFRKAELKYQKER------KLLEERIHGLSATVVANKVTYQKTISTVSENINSNLSQLE 622
           E+    ELK ++ER      KL  ++I+ L   +   +   ++    + EN+   + +LE
Sbjct: 525 ELKHAKELKEKEEREIDTTLKLYAQKINSLKEEMEKLRNEVEELRKEIPENLKERIKKLE 584

Query: 623 CV-IRKFILEHA--KYEKCVMDTSRDLRLTKSWVSNAIEETEGLKKEVADLGKQLEDKKE 682
            + I K  LEH   KY K + D  +     ++ +  A  E E LK+++ +  + +++ KE
Sbjct: 585 ELRIEKEKLEHKLNKYRKALEDRQKQKEEAQAKLHKAQTELELLKEKIREKSRLVKEFKE 644

Query: 683 ---------RESILVKQVEKLEIKANKEGSEKDGLVEAIHELEKRQRELEKMMEEKNEGM 734
                     E  L +++  +  K  +   ++  L +   EL  R+ +LE  +   NE +
Sbjct: 645 LYRVERLEDYEESLKEEINYINSKLQEIEEKEKKLRKHFEELSSRKSKLEGELSALNESI 704

[Close]

BLAST of CmaCh16G005560.1 vs. ExPASy Swiss-Prot
Match: H0YM25 (Golgin subfamily A member 6-like protein 22 OS=Homo sapiens OX=9606 GN=GOLGA6L22 PE=3 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 2.2e-04
Identity = 138/645 (21.40%), Postives = 288/645 (44.65%), Query Frame = 0


Query: 127 LEREFQEVGEIKQELDAALSEVADLKRILATTSKEHESLNSEHLTALSKLQEADEIIRDF 186
           L   ++  GE++Q L A  ++     R +   +KE ++L+ E        +E  E     
Sbjct: 118 LHDSWKFAGELEQALSAVTTQKKKADRYIEELTKERDALSLELYRNTITDEELKEKNAKL 177

Query: 187 KVEAETWDSQKSKFQLEIEELNLALSNA--------GRNESELNERLKGMATEMNNYIEE 246
           + + +  +S+KS+ QL ++EL   L  A              L + L+ ++ ++   +EE
Sbjct: 178 QEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQLQAEADHLGKELQSVSAKLQAQVEE 237

Query: 247 KETARRKIEEGEKTI----DESKALADQLKEKLSATMEEKEALNSQHLKTLSRVHEAYMI 306
            E   R  ++ E+ +    ++ +   ++++E+     E++E +  Q  K   R  E  M 
Sbjct: 238 NELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIREQEEK--MRRQEEMMW 297

Query: 307 TRDLKV---ESETWGGEKSKFLLEIEELNQKLGAAGKLEAQLNERLKDIGIENEYLIREK 366
            ++ K+   E   W  E+     +I EL +K+    K+  Q  +R ++  I  +   +E+
Sbjct: 298 EKEEKMRRQEEMMWEKEE-----KIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQ 357

Query: 367 ESAQRTIEEMSQRLSNAVKIEAELSGRLKDIETEKDGL-----IKEKEIAWKEIEQGTRV 426
           E+     EE  +     ++ + +   R ++   E++ +      +E+E  W++ E+  R 
Sbjct: 358 EAKMWRQEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQ-EEKIRE 417

Query: 427 REELNAMVDQLNSQLTITVEEKKSLSLQLEKEKV-ELLRSIADHQRNLKEHEDAYKKLND 486
           +EE+    ++++ Q     EEK    ++ ++EKV      + D +  ++E E+   +  +
Sbjct: 418 QEEIWRQKEKMHEQ-----EEK----IRKQEEKVWRQEEKMHDQEEKIREQEEKVWRQEE 477

Query: 487 EFQECKLKLDNAE--MKTAEMSREFHNDIRSKEQVKEDLEVMVEDLK------------- 546
           + +E + K +  E   +  E  RE    IR +E++  + E M E  K             
Sbjct: 478 KIREQEKKREQEEKMWRQEEKIREQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDK 537

Query: 547 --------RELEVK----SDEINSLVENARTIEVKLRLSNQKLRVTEQLLTEKEEIFRKA 606
                   RE E K     ++I    E  +  E K+    +K+R  E+ + E+EE  R+ 
Sbjct: 538 MWRQEEKIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEEKIREQEEKIREQEEKIREQ 597

Query: 607 ELKYQKERKLLEERIHGLSATVVANKVTYQKTISTVSENINSNLSQLECVIRKFILEHAK 666
           E K +++ ++++E+   +       K+  Q+ +    E I     + E  IR+   +  +
Sbjct: 598 EEKIREQEEMMQEQEEKMGEQ--EEKMQEQEKMRRQEEKIR----EQEEKIREQKEKIRE 657

Query: 667 YEKCVMDTSRDLRLTKSWVSNAIEETEGLKKEVADLGKQLEDKKERESILVKQVEKLEIK 724
            E+ + +    +R          E+ E ++++   +G+Q E   E+E  + +Q EK+  +
Sbjct: 658 QEEKIWEQEEKIR----------EQEEMMQEQEEKMGEQEEKIWEQEEKMQEQEEKMRRQ 717

[Close]

BLAST of CmaCh16G005560.1 vs. TAIR 10
Match: AT1G64330.1 (myosin heavy chain-related )

HSP 1 Score: 224.6 bits (571), Expect = 2.8e-58
Identity = 231/756 (30.56%), Postives = 350/756 (46.30%), Query Frame = 0


Query: 1   MTKHRFRNSLKSLFGSYLDPETNERLKGNKSVIEDKVNKIRQLIKGEDLGVEDHDQSEIR 60
           M K   R+SLKS F  +L P+  E LKG K+ I++KV KI  +++  D+   + D+S   
Sbjct: 1   MRKLSIRDSLKSFFEPHLHPDNGESLKGTKTEIDEKVKKILGIVESGDI---EEDES--- 60

Query: 61  KKQSIDELIDDFLNVYQALYEQYDSLTGELRRKFQKRREKESSSSSSSDSDSDDSSKKKV 120
           K+  + EL+ DF   Y++LY QYD LTGE+R+K   + E +SSSSSSSDSDSD  SK+  
Sbjct: 61  KRLVVAELVKDFYKEYESLYHQYDDLTGEIRKKVHGKGENDSSSSSSSDSDSDKKSKRN- 120

Query: 121 SKDDRGLEREFQEVGEIKQELDAALSEVADLKRILATTSKEHESLNSEHLTALSKLQEAD 180
                   R   E+  +K++++ A  E+ADLK  LATT +  E++ SEH   L KL+E+D
Sbjct: 121 -------GRGENEIELLKKQMEDANLEIADLKMKLATTDEHKEAVESEHQEILKKLKESD 180

Query: 181 EIIRDFKVEAETWDSQKSKFQLEIEELNLALSNAGRNESELNERLKGMATEMNNYIEEKE 240
           EI  + +VE E       K   E +ELN  L  AG  ES+LN++L+              
Sbjct: 181 EICGNLRVETE-------KLTSENKELNEKLEVAGETESDLNQKLE-------------- 240

Query: 241 TARRKIEEGEKTIDESKALADQLKEKLSATMEEKEALNSQHLKTLSRVHEAYMITRDLKV 300
                                                                   D+K 
Sbjct: 241 --------------------------------------------------------DVKK 300

Query: 301 ESETWGGEKSKFLLEIEELNQKLGAAGKLEAQLNERLKDIGIENEYLIREKESAQRTIEE 360
           E +                         LEA+L  + KD               + T+EE
Sbjct: 301 ERD------------------------GLEAELASKAKD--------------HESTLEE 360

Query: 361 MSQRLSNAVKIEAELSGRLKDIETEKDGLIKEKEIAWKEIEQGTRVREELNAMVDQLNSQ 420
           +++      + EAEL                             R ++E  A+++Q+N  
Sbjct: 361 VNRLQGQKNETEAELE----------------------------REKQEKPALLNQINDV 420

Query: 421 LTITVEEKKSLSLQLEKEKVELLRSIADHQRNLKEHEDAYKKLNDEFQECKLKLDNAEMK 480
               +E++ + +  L +E  ++     + +  +K+  D YK+  +  +E   K++  E +
Sbjct: 421 QKALLEQEAAYN-TLSQEHKQINGLFEEREATIKKLTDDYKQAREMLEEYMSKMEETERR 480

Query: 481 TAEMSREFHNDIRSKEQVKEDLEVMVEDLKRELEVKSDEINSLVENARTIEVKLRLSNQK 540
             E  +    D+ S+E    DLE  VE L+ E+E K DEI SL+E    IEVKLRLSNQK
Sbjct: 481 MQETGK----DVASRESAIVDLEETVESLRNEVERKGDEIESLMEKMSNIEVKLRLSNQK 540

Query: 541 LRVTEQLLTEKEEIFRKAELKYQKERKLLEERIHGLSATVVANKVTYQKTISTVSENINS 600
           LRVTEQ+LTEKE   ++ E K+ +E+ LLEE+I            TY+  I  +SE ++S
Sbjct: 541 LRVTEQVLTEKEGELKRIEAKHLEEQALLEEKI-------ATTHETYRGLIKEISERVDS 549

Query: 601 N-LSQLECVIRKFILEHAKYEKCVMDTSRDLRLTKSWVSNAIEETEGLKKEVADLGKQLE 660
             L++ + +  K   +H  YEK V++ ++ L   K  V                    +E
Sbjct: 601 TILNRFQSLSEKLEEKHKSYEKTVVEATKMLLTAKKCV--------------------VE 549

Query: 661 DKKERESILVKQVEKLEIKANKEGSEKDGLVEAIHELEKRQRELEKMMEEKNEGMVGLKE 720
            KKE++          E+   KE  EK        +LE + RE EK  E+  E ++GL E
Sbjct: 661 MKKEKD----------EMAKEKEEVEK--------KLEGQVREEEKEKEKLKETLLGLGE 549

Query: 721 EKKEAIRQLCMLIEYHRDRYDFLKDEVLKLNVKGGQ 756
           EK+EAIRQLC+ IE+HRDR ++L++ + K+ V  GQ
Sbjct: 721 EKREAIRQLCIWIEHHRDRCEYLEEVLSKMVVARGQ 549

[Close]

BLAST of CmaCh16G005560.1 vs. TAIR 10
Match: AT5G41790.1 (COP1-interactive protein 1 )

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-43
Identity = 217/787 (27.57%), Postives = 388/787 (49.30%), Query Frame = 0


Query: 1   MTKHRFRNSLKSLFGSYLDPETNERLKGNKSVIEDKVNKIRQLIKGEDLGVEDHDQSEIR 60
           M KH+FR +LKS F  + D E  E LKG K+ I++KVNKI  +++  D+   + D+S   
Sbjct: 1   MKKHKFRETLKSFFEPHFDHEKGEMLKGTKTEIDEKVNKILGMVESGDV---NEDES--- 60

Query: 61  KKQSIDELIDDFLNVYQALYEQYDSLTGELRRKFQKRREKESSSSSSSDSDSDDSSKKKV 120
            +Q + +L+ +F + YQ+LY QYD LTGE+R+K   +   ESSSSSSSDSDSD SSK+KV
Sbjct: 61  NRQVVADLVKEFYSEYQSLYRQYDDLTGEIRKKVNGK--GESSSSSSSDSDSDHSSKRKV 120

Query: 121 SKDDRG-LEREFQEV-GEIKQELDAALSEVADLKRILATTSKEHESLNSEHLTALSKLQE 180
            ++  G +E++ + V G +KQ+++AA  E+ADLK  L TT +E E+++SE   AL KL+E
Sbjct: 121 KRNGNGKVEKDVELVTGALKQQIEAANLEIADLKGKLTTTVEEKEAVDSELELALMKLKE 180

Query: 181 ADEIIRDFKVEAETWDSQKSKFQLEIEELNLALSNAGRNESELNERLKGMATEMNNYIEE 240
           ++EI    K+E E  + +KS    +  EL+  L  AG+ E++LN++L+ +  E +    E
Sbjct: 181 SEEISSKLKLETEKLEDEKSIALSDNRELHQKLEVAGKTETDLNQKLEDIKKERDELQTE 240

Query: 241 KETARRKIEEGEKTIDESKALADQLKEKLSATMEEKEALNSQHLKTLSRVHEAYMITRDL 300
           ++   ++ +E EK  ++ K  +DQLK++ S   ++ EA   +  +  S ++ A    + L
Sbjct: 241 RDNGIKRFQEAEKVAEDWKTTSDQLKDETSNLKQQLEASEQRVSELTSGMNSAEEENKSL 300

Query: 301 KVESETWGGEKSKFLLEIEELNQKLGAAGKLEAQLNERLKDIGIENEYLI-----REKES 360
            ++         +    I+EL  +LG       ++ E+ K+   E+  L+      E+ES
Sbjct: 301 SLKVSEISDVIQQGQTTIQELISELG-------EMKEKYKEKESEHSSLVELHKTHERES 360

Query: 361 AQRTIEEMSQRLSNAVKIEAELSGRLKDIETEKDGLIKEKEIAWKEIEQGTRVREELNAM 420
           + + ++E+   + ++ K+ A+ +  L + E EK  L ++      EI++     +EL + 
Sbjct: 361 SSQ-VKELEAHIESSEKLVADFTQSLNNAEEEKKLLSQKIAELSNEIQEAQNTMQELMSE 420

Query: 421 VDQLNSQLTITVEEKKSL--------------SLQLEKEKVELLRSIADHQRNLKEHEDA 480
             QL    ++   E  SL              + +LE +     + ++D   +LK  E+ 
Sbjct: 421 SGQLKESHSVKERELFSLRDIHEIHQRDSSTRASELEAQLESSKQQVSDLSASLKAAEEE 480

Query: 481 YKKLNDEFQECKLKLDN---------AEM-KTAEMSREFHNDIRSKEQVKE----DLEVM 540
            K ++ +  E   KL+          AE+ K  +  RE  +++ S  +V E    D  + 
Sbjct: 481 NKAISSKNVETMNKLEQTQNTIQELMAELGKLKDSHREKESELSSLVEVHETHQRDSSIH 540

Query: 541 VEDLKRELEVKSDEINSLVENARTIEVKLRLSNQKL-----RVTEQLLTEKEEIFRKAEL 600
           V++L+ ++E     +  L +     E + ++ +QK+      + E   T +E +    +L
Sbjct: 541 VKELEEQVESSKKLVAELNQTLNNAEEEKKVLSQKIAELSNEIKEAQNTIQELVSESGQL 600

Query: 601 KYQ---KERKLLEER-IHGLSATVVANKVTYQKTISTVSENINSNLSQLECVIRKFILEH 660
           K     K+R L   R IH           T+Q+  ST    + + L   E  I    ++ 
Sbjct: 601 KESHSVKDRDLFSLRDIH----------ETHQRESSTRVSELEAQLESSEQRISDLTVDL 660

Query: 661 AKYEKCVMDTSRDLRLTKSWVSNAIEETEGLKKEVAD-LGKQLEDKKERESILV------ 720
              E    + ++ +      + + +E+ +   KE+ D LG+  +  KE+ES L       
Sbjct: 661 KDAE----EENKAISSKNLEIMDKLEQAQNTIKELMDELGELKDRHKEKESELSSLVKSA 720

Query: 721 -KQVEKLEIKANKEGSEKDGLVEAIHELEKRQRELEKMMEEKNEGMVGLKEEKKEAIRQL 736
            +QV  ++   +    EK  L + I ++    +E +K ++E       LKE      R+L
Sbjct: 721 DQQVADMKQSLDNAEEEKKMLSQRILDISNEIQEAQKTIQEHMSESEQLKESHGVKEREL 757

[Close]

BLAST of CmaCh16G005560.1 vs. TAIR 10
Match: AT1G64320.1 (myosin heavy chain-related )

HSP 1 Score: 82.0 bits (201), Expect = 2.2e-15
Identity = 120/460 (26.09%), Postives = 219/460 (47.61%), Query Frame = 0


Query: 320 NQKLGAAGKLEAQLNERLKDIGIENEYLIREKESAQRTIE----EMSQRLSNAVKIEAEL 379
           N +LG   ++E  L  +LK++  E  +L          +E    E  +R+   +     +
Sbjct: 43  NSELGLTSRIE-DLKCQLKNLEQEIGFLRARNAGLAGNLEVTKVEEKERVKGLMDQVNGM 102

Query: 380 SGRLKDIETEKDGLIKEKEIAWKEIEQGTRVREELNAMVDQLNSQLTITVEEKKSLSLQL 439
              L+ + ++KD    + E   K++E+ T  + +L ++ ++       T EE+  LS ++
Sbjct: 103 KHELESLRSQKDESEAKLE---KKVEEVTETKMQLKSLKEE-------TEEERNRLSEEI 162

Query: 440 EKEKVE---LLRSIAD--------HQRNLKEHEDAYKKLNDEFQECKLKLDNAEMKTAEM 499
           ++ K E   L R I++          ++  E EDA KKL+ E  + K KL          
Sbjct: 163 DQLKGENQMLHRRISELDSLHMEMKTKSAHEMEDASKKLDTEVSDQK-KL---------- 222

Query: 500 SREFHNDIRSKEQVKEDLEVMVEDLKRELEVKSDEINSLVENARTIEVKLRLSNQKLRVT 559
                  ++ ++ +   L   ++D +R L+ + D I+   E+ +  +     S++ L++ 
Sbjct: 223 -------VKEQDDIIRRLSAKIKDQQRLLKEQKDTIDKFAEDQKQSKRWSFGSSRDLKLN 282

Query: 560 EQLLTEK-EEIFRKAELKYQKERKLLEERIHGLSATVVANKVTYQKTISTVSENINSNLS 619
              L  K EE+     +K +   ++L  RIH      + +K  Y KT   + EN  +  S
Sbjct: 283 PNALERKMEELAEDFRMKIEDHIRILYRRIHVAEQIHLESKNEYIKTRDMLKENKENRES 342

Query: 620 ----QLECVIRKFILEHA---------KYEKCVMDTSRDLRLTKSWVSNAIEETEGLKKE 679
               + +    K  LE           K E+    T+R  R+ K   S  +  +E  K E
Sbjct: 343 LMFFETQFNKMKDALEKGYTGSETAMKKLEEAEEVTNRVARIGKEMESAKLWVSE-KKSE 402

Query: 680 VADLGKQLEDKKERESILVKQVEKLEIKANKEGSEKDGLVEAIHELEKRQRELEKMMEEK 739
           V  L  +LE  + +E++L +++ KLE K  +EG+EK  L + + + E R +ELE  ++ +
Sbjct: 403 VETLTAKLECSEAQETLLKEKLSKLEKKLAEEGTEKLKLAKVLSKFETRIKELEVKVKGR 462

Query: 740 NEGMVGLKEEKKEAIRQLCMLIEYHRDRYDFLKDEVLKLN 751
              ++ L EEK+EAIRQLC+L++YH+DRY+ LK  +LK++
Sbjct: 463 EVELLSLGEEKREAIRQLCILVDYHQDRYNQLKKSILKVD 472

[Close]

BLAST of CmaCh16G005560.1 vs. TAIR 10
Match: AT5G41780.1 (myosin heavy chain-related )

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-14
Identity = 123/490 (25.10%), Postives = 230/490 (46.94%), Query Frame = 0


Query: 275 EALNSQHLKTLSRVHEAYMITRDLKVESETWGGEKSKFLLEIEELNQKLGAAGKLEAQLN 334
           + L+S +   L ++ E  +   DL+ +      +++ FL +     Q +  AG +E + N
Sbjct: 92  DTLSSDYDVMLRKLQETELRNEDLERQVSNL-KQETVFLRD-----QNMEVAGDIEGKRN 151

Query: 335 ---ERLKDI--GIENEYLIREKESAQRTIEEMSQRLSNAVKIEAELSGRLKDIETEKD-- 394
              E LK +   +E   L  +K   +  + + + ++S       E   RLK +E E +  
Sbjct: 152 EDREHLKGLMTKLEAALLCNQKRELEMELVKKTNQVS-------ETQMRLKRLEEETEKR 211

Query: 395 -----GLIKEKEIAWKEIEQGTRVREELNAMVDQLNSQLTITVEEKKSLSLQLEK--EKV 454
                 ++KEKE  W ++       ++L A VD    +     EE KS   + +K   K+
Sbjct: 212 AKAEMKIVKEKEALWNKV-------QKLEAGVDTFRKKRKEFNEEMKSKITENQKLHTKI 271

Query: 455 ELLRSIADHQRNL----KEHEDAYKKLNDEFQECKLKLDNAEMKTAEMSREFHNDIRSKE 514
            ++  I D  + L    KE ED  ++L+ E ++ K  L   E K A    +F  D +  +
Sbjct: 272 AVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKDQKKLL--KEQKDA--IDKFSEDQKLMK 331

Query: 515 QVKEDLEVMVEDLKRELEVKSDEINSLVENARTIEVKLRLSNQKLRVTEQLLTEKEEIFR 574
           +     ++    L++++E  +++    +E+       +R+ ++++ V EQ+  E +  + 
Sbjct: 332 RWSFGSKLNTNLLEKKMEELAEDFRMKMED------HIRILHRRIHVAEQIHLESKSSYI 391

Query: 575 KAELKYQKERKLLEERIHGLSATVVANKVTYQKTISTVSENINSNLSQLECVIRKFILEH 634
           K     Q E    E R          N+   +     + E +   L+  E  I+K + E 
Sbjct: 392 KTRDNTQTE----ENR---------GNRAVSETQFKKIKEMVEQGLAGPEMAIKK-LEES 451

Query: 635 AKYEKCVMDTSRDLRLTKSWVSNAIEETEGLKKEVADLGKQLEDKKERESILVKQVEKLE 694
            +    V   ++++   + WV    E+   +K EV  L  +LE ++ +ES+L +++ KLE
Sbjct: 452 GELGNRVTRLAKEIDSARKWVK---EKDNNMKHEVETLEAKLECREAQESLLKEKLSKLE 511

Query: 695 IKANKEGSEKDGLVEAIHELEKRQRELEKMMEEKNEGMVGLKEEKKEAIRQLCMLIEYHR 747
            K  +EG+EK  L +A+ +++K    LE  ++EK   ++ L E K+EAIRQLC+L++Y R
Sbjct: 512 AKLAEEGTEKLSLSKAMRKIKK----LEINVKEKEFELLSLGEGKREAIRQLCVLVDYQR 530

The following BLAST results are available for this feature:

BLAST of CmaCh16G005560.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JZY1	1.6e-42	27.57	COP1-interactive protein 1 OS=Arabidopsis thaliana OX=3702 GN=CIP1 PE=1 SV=1	[more]
P25386	2.0e-05	21.01	Intracellular protein transport protein USO1 OS=Saccharomyces cerevisiae (strain...	[more]
O67124	7.7e-05	22.36	Probable DNA double-strand break repair Rad50 ATPase OS=Aquifex aeolicus (strain...	[more]
H0YM25	2.2e-04	21.40	Golgin subfamily A member 6-like protein 22 OS=Homo sapiens OX=9606 GN=GOLGA6L22...	[more]

BLAST of CmaCh16G005560.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64330.1	2.8e-58	30.56	myosin heavy chain-related	[more]
AT5G41790.1	1.1e-43	27.57	COP1-interactive protein 1	[more]
AT1G64320.1	2.2e-15	26.09	myosin heavy chain-related	[more]
AT5G41780.1	1.9e-14	25.10	myosin heavy chain-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 400..427
None	No IPR available	COILS	Coil	Coil	coord: 316..336
None	No IPR available	COILS	Coil	Coil	coord: 492..526
None	No IPR available	COILS	Coil	Coil	coord: 127..168
None	No IPR available	COILS	Coil	Coil	coord: 686..727
None	No IPR available	COILS	Coil	Coil	coord: 432..487
None	No IPR available	COILS	Coil	Coil	coord: 344..392
None	No IPR available	COILS	Coil	Coil	coord: 204..280
None	No IPR available	COILS	Coil	Coil	coord: 637..678
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..127
None	No IPR available	PANTHER	PTHR47357:SF1	COP1-INTERACTIVE PROTEIN 1	coord: 1..265
None	No IPR available	PANTHER	PTHR47357:SF1	COP1-INTERACTIVE PROTEIN 1	coord: 359..422
None	No IPR available	PANTHER	PTHR47357	COP1-INTERACTIVE PROTEIN 1	coord: 426..756
None	No IPR available	PANTHER	PTHR47357:SF1	COP1-INTERACTIVE PROTEIN 1	coord: 262..362
None	No IPR available	PANTHER	PTHR47357:SF1	COP1-INTERACTIVE PROTEIN 1	coord: 426..756
None	No IPR available	PANTHER	PTHR47357	COP1-INTERACTIVE PROTEIN 1	coord: 359..422
None	No IPR available	PANTHER	PTHR47357	COP1-INTERACTIVE PROTEIN 1	coord: 262..362 coord: 1..265
IPR011684	Protein Networked (NET), actin-binding (NAB) domain	PFAM	PF07765	KIP1	coord: 15..84 e-value: 1.0E-9 score: 38.3
IPR011684	Protein Networked (NET), actin-binding (NAB) domain	PROSITE	PS51774	NAB	coord: 10..90 score: 18.10754

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh16G005560	CmaCh16G005560	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G005560.1:exon:1059	CmaCh16G005560.1:exon:1059	exon
CmaCh16G005560.1:exon:1058	CmaCh16G005560.1:exon:1058	exon
CmaCh16G005560.1:exon:1057	CmaCh16G005560.1:exon:1057	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G005560.1:three_prime_utr	CmaCh16G005560.1:three_prime_utr_2	three_prime_UTR
CmaCh16G005560.1:three_prime_utr	CmaCh16G005560.1:three_prime_utr	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh16G005560.1:cds	CmaCh16G005560.1:cds_2	CDS
CmaCh16G005560.1:cds	CmaCh16G005560.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh16G005560.1	CmaCh16G005560.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003779	actin binding