CmaCh16G005080.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G005080.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr16: 2608001 .. 2608443 (-)
Sequence length270
RNA-Seq ExpressionCmaCh16G005080.1
SyntenyCmaCh16G005080.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTTGAATATTCTTTTTGTCAATTATTATTCAACTGACTATAAGTAGTTGGGAAAAATTGTTTTAGTGCGGCCCACTGGGCCAGATGGGCCGATAAAACCTCCTTTTGATAAATCTTTTTCAAATATTTTCGGTATCGACCCTTTATTTTGAAATATTGCATAATTCCCCCAGGCTTTCTACTCCGAAAATCTCCCGCTCGCTAACTAGTTCAGATTTCTCGGACTTCGATTTCTTCCCTCACTTGCAGTTCGTCACTTTGTCGTCGTCGTCGCCGTCGCCGTCGCCGCGACTCTACGGCATTAACTGGAGTCAACTCACCGACTCGTTTCACTGGCAGCAGTTTTCTAATTTATTCTATCTGCTGCGTTGCTGTCGCGCCATTTCCGCATCGTTTGATTTCAGGCAGAATTTAGCAAGACAGGGTTGGGGATCGTAG

mRNA sequence

ATGAAGCTTTCTACTCCGAAAATCTCCCGCTCGCTAACTAGTTCAGATTTCTCGGACTTCGATTTCTTCCCTCACTTGCAGTTCGTCACTTTGTCGTCGTCGTCGCCGTCGCCGTCGCCGCGACTCTACGGCATTAACTGGAGTCAACTCACCGACTCGTTTCACTGGCAGCAGTTTTCTAATTTATTCTATCTGCTGCGTTGCTGTCGCGCCATTTCCGCATCGTTTGATTTCAGGCAGAATTTAGCAAGACAGGGTTGGGGATCGTAG

Coding sequence (CDS)

ATGAAGCTTTCTACTCCGAAAATCTCCCGCTCGCTAACTAGTTCAGATTTCTCGGACTTCGATTTCTTCCCTCACTTGCAGTTCGTCACTTTGTCGTCGTCGTCGCCGTCGCCGTCGCCGCGACTCTACGGCATTAACTGGAGTCAACTCACCGACTCGTTTCACTGGCAGCAGTTTTCTAATTTATTCTATCTGCTGCGTTGCTGTCGCGCCATTTCCGCATCGTTTGATTTCAGGCAGAATTTAGCAAGACAGGGTTGGGGATCGTAG

Protein sequence

MKLSTPKISRSLTSSDFSDFDFFPHLQFVTLSSSSPSPSPRLYGINWSQLTDSFHWQQFSNLFYLLRCCRAISASFDFRQNLARQGWGS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh16G005080CmaCh16G005080gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G005080.1:exon:865CmaCh16G005080.1:exon:865exon
CmaCh16G005080.1:exon:864CmaCh16G005080.1:exon:864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh16G005080.1:cdsCmaCh16G005080.1:cds_2CDS
CmaCh16G005080.1:cdsCmaCh16G005080.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh16G005080.1CmaCh16G005080.1-proteinpolypeptide