CmaCh15G013540.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh15G013540.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr15: 8507345 .. 8512979 (-)
Sequence length324
RNA-Seq ExpressionCmaCh15G013540.1
SyntenyCmaCh15G013540.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTGCAGGTGTATTGCCTCTGCAGTATAACCTATCCTCCAAGCTACCATTTTCCATGTACTCATAAACCAGACAGTTCATATCCGGACATGCACCGAGGAGGAGTAGTAGATGAGGATGATGGATTTTGCTCAAGATTTCAAGCTGAAAAGAAACAAGGACAGATTTTGATAAAAAATGTAACGAAATTTGAGCAGAAAAGCAACAAGGGACAGATTTTGATCGAAAACGTAATGAAATTTGAGCAGAAAAGCAACAAGGGGCAGATTTTGATCAAAAACGTAACGAAGTTCGAGCTGAAAAGCAACAAGGGATAGATTTTGATCGAAAACATAACGGAGTTTGAGCTGCAAAGCATCAAGGGACAGATTTTGATCGAAAACATAACGAAGTTCAAGCTGAAAAGCAACAAGGGACAGATTTGAGTTTGAGCTGCAAAGCAACAAGGGACAGATTTTAATCGAAAACGTAACGAAGTTTGAGCTGAAAAGCAACAAGGGACAGATTTTGATCGAAAATGTAACGAAATTCTAAAAGAAACATGTTTGTGAGATGTTATTTTGAACAGTTCACTCACCTCCTGAAGAAATTGGGTCTTTTTGTGATCATCTCTAGAATGAAGAACCTTTACTGCTACAGTTGTATGATGTAAACTGCACTTATAAACTGTTCCATGTGCTCCCATTCCAAGCTTAAGATCCTCTGAGAAAGATGATGTTGCAGAAACAATATCTTCCCACTGAAAATGTTGGTATTGCTGCAGAGGTCCTTCAAGAGCATTCTCATGCTTTCCTTTCTCTTTGACATCTTGAAGAGCTTTTGTCTCTGCTTCCTTCCTGTAGATGCCCTCTCTTTCGGCACGTTCTTTTACGTACTTCGCTTCTCTTCTTAAAGCTTCACGCTTCGTTCTCTCTTCCCTTGCAAATTCTTTGGCAGCCACCTCTCTGTTCTTGATCTCGTCGAGCTTCCTAGCATCCTCCAATCGTTGTTTATTTAGATGGTTCAGCTGATAAAAATCAATAATGGGGTGGGTGACTGTCAAAGAGCATGAAAAGAAAACAAGTAGAGGGAGGAGTACTCATAGGTTATGAATGATGAATAGAAAAATGATATCTACCTTTCGAGAGGCATCGATCGTCTCTCGTTGAGCAATTGCGTACATTCCTCTCGCATGTCTTAGTTTGATTCTCAACTTTTCAAGCTCAAAGTTGACATCCGTCTGTCAATGCAAGAAGCAAATTGAATATACAAATATGTCATAGTAACATCAAATAAATGAACGTCAGAATGAAAGAAGCATTGTTTATAAGGGTGTGAAAACCTCTCCCTAACAGACGTCAAACGCATTTAAAACCCTAAGGAGTCACGAAGAGAAAGCTCAAAGAGAATAATATCTACTAACGGAGGGGGCTTGGGTTGTTACAATGGTATCATAGCCAGACAATCGGGCAGTGTGCTAGAGAGGACACCGGGTCACCCCGGATTGTGAGATCTACATTGGTTGAAGAAGGGAACGAACCATTTTTTATAAGAGTGTGGAAATCTCTTTCTAACAGAAAACCTTGAGGGGAAAACTGGAAGGAAAAGTCCAAAGAAGATAATATCTACTAGAAGTGGACTTGGGCTGTTACAATGATATCATAGCCAGACAACCAGGCAGTGTGCCAGCGAGGACGCTAGGCCACTCCGAATTGTGAGATCCCACATTAGTTGGAGAGGGGAACGATGACACAAGAACGCTAGTCCCCCAAGGGGGTGGATTGTGAGATCCCACGTTAGTTGGAAAAGGGAACGAAACATTTTTTATAAGGGTGTAGAAACCTCACCCTAACAGACGCATTTTAAAATCGGAAGGGAAAGCTATAATCTCTCTCAACCACTAGTGGTGAATTACATATAAGCTCTCCAAGAAAGAATTAGAGCCTTAAATGGATGCAAATGCTCAAGCCAAAAAGACCAAAAGATAACAAGCCAAGGGAACATATGAAATGATCCATTGAACTAACAACAAGCCAAGGCAAATAGCAGATGGATTACCTGACTTTCACATGAAACGTGATCACTGAACACGCCTGAGGACGAAGCTTCATCAATCCAAGATTGGCCATCTGTAGGCAAACTTTTACAGCTAGAGTCTCGACTCAATGTTCGTGCACAATCTGAAACATAGGAAGAAGAACGAACACCATCCACCTGATCCTCAATATCAACAGATTGACATCTAGAATGATCAGCTTTAATGGGGCTTGATTTCGTCGTAAGAAGAGTCTGGTTGATGGTTGAAAGAGCTTGAAATCGTTGTAATGGTAGGGACGGGGAAGAAGAAGGGAAATCAGAGTAGGGCGTAGTTAAGCTCGAATTGCTATCTGTATCAACAAAACAGGAAAAAATGAATAATAAAATTTATAATATGAACTAAAGATGAACAAACACTATCTCTGGTTGAATGCTGGTAAAATATGCATGCAGATCAAAGCTAATGGCTACCAGTAACTGAGCTGGATGAATAGCTCAAGTAGCTATTTGCAGAACTTGATTCACTCGCATCATCTTTAATGCTCACGTTTGTCTCCATATCAGGCTGCCGTATTGAGGCTAATTGTCCTTTTGAAATAGCATAGACTGTACAATGTCTAGGTGCAAGTGCTGATATTCTTGAGGATAGACCATTTAGTTTCCTACCAAAAAATGTCATCCAGACACGACAAAAAGATGAGAAAATAAACATAATACTATGTTTGAGAGCTGAAATATGTACTCAACAAAGTGTAATGAGAAAATAAACAGAAATCAGTGTAATGATAAAATAAGCAGCAGTTGTCCCTTTAGGCTTACTGTCCCCGACAAAGTGTAAGAACCTAGTACAATGTCATTGAAACGGTCAAAGTCCACCGCTAGTAGATATTGCTTCTTTGGGCTTTTCCATTTGGGCTTCCCGTCAAAGTTTTTAAAACCCGTTTACTAAAGAAAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCTCCTCTCCAACCAATATGGGATCTCACATTCCACACCTCCCTTGGGGCCAGCGTCCTCGCTGGCACACCGCTCAGTATCTAGCTCTGATACCATTTGTAACAGCCTAAGGCCACCGCTAGTAAATATTGTCCGCTTTAGCCCGTTGCGTATCGCCGTTAGACTCATAGTTTTAAAACACGTCTACTAGGGAGAAATTTCCACACCCTTATAAGGAATGTTTCGCTCCCCTCTCCAACGGATATAGGATCTCACAATTCACCCCTCTTGGGGGCCAGCGTCCTCGCTGGCACACTGTTCGGTGTCTGGCTCTGATAACATTTGTAACAGCCCAAGGTCACTACTAGTAAATATCGTCTGTTTTAGCCCATTACGTATTGCAGTCAATCTCACGGTTTTAAAACACGTCTACTAGAGGTTTCCACACGCTTATAAGGAATGTTTCATTTTCCTCTCAAACCAATGTGGGATCTCACAATCCACCCCTCTTGAAGGCCAGCGTCCTCGTTGGCACACTACCCGGTGTCTGGCTCCGATACCATTTGTAACAGTCTAAGACCACCCCTAGTAGATATTGTCCGTTTTAGCCCATTACGTATTGCCATCAGCTTCACAATTTTAAAATACGTCTACTAGAAAGAGGGTTCTACACCCGTATAAGGAATGCTTTGTTCTCCTATCCAACCAATGTGGGAATCAGGCACTTGTGTCCTGATGTCTCCACGTTAATCTCGTTTATAACTTTCACAACCCTACAGAAACCTTCATTTGATGTTTGTCATTACATATCTTAATTTAGTAAAGAGCATGCTAAAGAGAGTTAATTACCATGAGAAAAAACCCTGTGATGAAACTCCTATAACAAGCTTGCTAATTGAACACTTCGTGACCTCTTCTATTATTGCATTTGCCACATCATCTGCTTCAAGAGTCACAACATCAAGTTGAACCTACATTTTGAAAGAAGATTTCAGCTTATTCTGTTTTCCTATCCACAATTCAAATTAGTGTAAGGCCGGACCTTTCTTTGAGCAAACATCTTCGTGTATGGAAGAAGCTTTTCGTTCGTCTGCCACCCGATTTCTTTCCTATAAGCTGCAGCGACATCGTCACGAACTTGTGAAACTGGAATTGAATTCCCCACTGCATCAACATTGGCATACAGCTTGAATATGCTATCTAGATAAAGTTTAGTGTTAGCCACAAGGAAGTATAGGGAAAATCTGATCAATTTTTACGTCTAATGAGATTTTGTCTCACACGTTAAGAATTAAAAAATGAACACAACGTATAGGGTTGAAGTAACTTGGTCATGTCGGGAGGTTATTACCCTCTGAATGGACCATGCTTGACCTTGTCTTTTCACCTTAGTAGTCCTATGCATGGTCAGTACTATAGCTCCATGGCCTAATTTTCTGCGTCATTTCTTAACCTCATGATGCAACTTTGTTCAAGATTACATTGTGAGGGTGGATTTGCACATATTGGGGTCACTACATGTAACCGTGCAAGTCCACTGCTAATAGATATGGTCCTCTTTAGGTTTTTTCTTTCGGACTTCCCCTCAAGGTTTTTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTCATAAAGAATGTTTCGTTCCCCTCTCCAACTGATATGGGATCTCACAATCCACTCCGATTCGGGGCCTTTGGGCTTTCCCTCTTGGACTTCCTCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACCGACGTGGGATCTCACAATCCACCCCCCTTTGGGCTTTCCCTTTCGGACTTCACCTCTAAGTTTTCAAAACGCGTCTGTTAGGGAGAGGTTTCCACATCCTTATAAAGAATGTTTTGTTCCTCACTCCAATCAATGTAGGATCTCACAATCCACCCCCCTTCCGAGCCTTTGGGCTTTCCCTTTCGGACTCCACCTCAAGGTTTTTAAAACGCATCTGCTAGGGAGACGTTTCCACACCCTTATAAAGAATGTTTCGTTGCCCTCTCCAACCGATGTTGGATCTCACAATTCACCCCCCTTTAGAGCATTTGGGCTTTCCGTTTCGGACTTCCCCTCAAGATTTTTAAAGCACATCTGCTAGCGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTTCCCTCTCCAACCGATGAAGGATCTCACAATGCACCCTCTTTCGGGATCCAGCATCCTCACTGACACTCGTTCCTCTCTCCAATCGATGTGGGATCTCACAATCCACCCCTTTAAAGCCTAGCATCCTCACTGGCACTCGTTCCTCTCTCCATAATGTGGAAACTCATGGATCTTAAGATGGTCACAAAAATGTGTACTTTTCAATTTTCAGTACAAGAACCAAGCGTAAAGTGAACCTCCACATAAACAACCAAAAACATATTCAATTTGAAGTGCACGGCTTACTTGGAGTTGGGACACTAGTAATCCTCGGTGTGACATGTAGCAGCTTGAAATTAATGATGCCCTCAGGTAGAAACTTTTCCAACGACCACCTAATTATATATCTACTGTTTTTCTTCCCACTGATAGCAACGGCTACAACTGGAGAAGGGGAAGGCAGTGAAATAA

mRNA sequence

ATGGAATTGCAGGTGTATTGCCTCTGCAGTATAACCTATCCTCCAAGCTACCATTTTCCATGTACTCATAAACCAGACAGTTCATATCCGGACATGCACCGAGGAGGAGTAGTAGATGAGGATGATGGATTTTGCTCAAGATTTCAAGCTGAAAAGAAACAAGGACAGATTTTGATAAAAAATGTAACGAAATTTGAGCAGAAAAGCAACAAGGGACAGATTTTGATCGAAAACGTAATGAAATTTGAGCAGAAAAGCAACAAGGGGCAGATTTTGATCAAAAACCAACGGCTACAACTGGAGAAGGGGAAGGCAGTGAAATAA

Coding sequence (CDS)

ATGGAATTGCAGGTGTATTGCCTCTGCAGTATAACCTATCCTCCAAGCTACCATTTTCCATGTACTCATAAACCAGACAGTTCATATCCGGACATGCACCGAGGAGGAGTAGTAGATGAGGATGATGGATTTTGCTCAAGATTTCAAGCTGAAAAGAAACAAGGACAGATTTTGATAAAAAATGTAACGAAATTTGAGCAGAAAAGCAACAAGGGACAGATTTTGATCGAAAACGTAATGAAATTTGAGCAGAAAAGCAACAAGGGGCAGATTTTGATCAAAAACCAACGGCTACAACTGGAGAAGGGGAAGGCAGTGAAATAA

Protein sequence

MELQVYCLCSITYPPSYHFPCTHKPDSSYPDMHRGGVVDEDDGFCSRFQAEKKQGQILIKNVTKFEQKSNKGQILIENVMKFEQKSNKGQILIKNQRLQLEKGKAVK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh15G013540CmaCh15G013540gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh15G013540.1:exon:315CmaCh15G013540.1:exon:315exon
CmaCh15G013540.1:exon:314CmaCh15G013540.1:exon:314exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh15G013540.1:cdsCmaCh15G013540.1:cds_2CDS
CmaCh15G013540.1:cdsCmaCh15G013540.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh15G013540.1CmaCh15G013540.1-proteinpolypeptide