CmaCh15G009200.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTGGTTTTTTTTTTCTTCCGGCCATATTCTGTGAGAGCGACCAAAGAAACTAGCGACGGAAAAACAGCCCTTAACCATTCTCTCTCTCTCTCTCTACAAGCTCCGATACTTCTCTCTTCCTCTCAAATTTCCCCCAGAAATTCGTAGTAACAGAGTCCTACGGAAATCCGGCAACTCTGTCTGTAATCGGCTGTTTTGAATCTCCGGTCAATGGTGTGTGCGAGGGTCTCTTGAGACAACGAACGGAGCTGGTCGATGAGAATGCGGTCCGAGAGATCGAAATCTCTTCATAATTTCATGTTGCCGTGTTTGAAGTGGGGGAATCAAAAGCACTTGAGGTGCATGAAGGTGAATTCTAATGGTGTACAGGTCTCCGGCATGAATCGACAATCTCACTCCTCGAGATCGGAGGAGTCTACGGAGAGTAGGAGTCGGGAATCGGGCTCAGAGATGCGGATGTTCTTCAAGGATTTGGAGATGAGACCGAAGGTTTCGAAATCGATAATCAAGAAAACCGACGACGTCGGGATCGAGGCGGTCAGAGAGAAGCTTATGTTTGATCTGAAGACGGCGGCTGATAAAATGAAAGAGGCGATTTTAAGTAAGGAGGCAGTGGTGACCGGAGAAGAGGCGGAAGAGAAGAACGATTCTGCCGGAATGGAAGAGACGCCGGCGGCGGTTGCGTTATCGATGGCGGAGACCAGACCTTGGAATCTAAGGACGAGGAGAGCCGCCTGTAAGGCTCCGAATGTTGACGGTGGTGGAAGTAAGAATTTGAAGCTTGATGAGAAGAAATCGAATTCCAATTCCCCGTTGCGTAGTGACGGTGACGTCAAGTCACCTAGGTTGAAAATTGGGACGGAGAAGAAGAAGAAGAAGGTGAAATTGGTAGTGCCGCTCTCGAAGAGAGAGATCGATGAAGATTTCATGGAAATGGTGGGACTCAGACCACCGAGGCGGCCCAAGAAGAGGACCAGAATCGTACAAAAGCAATTAGATGTAAGTTCGTTCAAATTGCCCTTATTCTTCGTCAAGTTTCGAGTAATTTTCCAATTCAAGTTCTCTAATCTGCCTCTAGATACCATTTTTGCTTAGAAATAGAGAATCCACGTTTAATCTGTACCATTTTGCAGACGCTTTTTCCTGGGTTATGGCTGTCGGAGATCACAGCTGATTTGTATAAGGTCCCTGAATTACCTGAAAACGGCAAGGTAAATGCTCCTTTCGTTCTGTCGATAAAGATCATTTTCTAAATGTTTATCTCTGAAGAAAATGAGTGGTTCTGTTTAACTAGTCTTCGTCCATCCTACATGATTGAGCTTCAAAATTCTTCCTGGATTCTGATACTGTAGATTTTTCTTCAATCTCTGTTGTTGCACAGGTGATGAAGGTTTGAAGTGCTACTTCTTTGCAGAGATTCAAAAACTTCCCCATTCATGTGCTGACTCCAGAGTAATTCATGGGTTTGATTGGTGATCATGCTGTATGCCCTGGCAGTTTGGTATCAACCACTGTTGAATCCCACCCGATAACTTGCGGTGTATGGTCTTCCTCTACTTTCAAATGCTAATTTTTGTTCATAAATTAATCTGGTTTTGCCTTTGCTAGACGTGGAATAATTCACAAAGAATAGGATTGGAGGAATTTGGAACTGGATAAAAGGACATTTTCTTGTATGATCTTGAGTGATACAATGTCTTGTGGAAAGCCCTGGTCAAGAAATGAATGTGTAGCATACTGTCATCATTTGGGAATATCAGTGCTTGAATATTGATGCATATTCATGTAGTTACTTACAGAATAGATTCAGTCAACTTGTGTTAGAAATGTCAAACTTGTTGTTTCAACACTTCACAGATCATTTCTTGTTAATATTGAACTTTTTTGTTTTGTTTCAGTTGAATGCCTTCGTTGAGTTCTAGGAAATTAGTTTCTTGCACAACCCTAGTTTGAAGCTGCAGTCTGC GTGGTTTTTTTTTTCTTCCGGCCATATTCTGTGAGAGCGACCAAAGAAACTAGCGACGGAAAAACAGCCCTTAACCATTCTCTCTCTCTCTCTCTACAAGCTCCGATACTTCTCTCTTCCTCTCAAATTTCCCCCAGAAATTCGTAGTAACAGAGTCCTACGGAAATCCGGCAACTCTGTCTGTAATCGGCTGTTTTGAATCTCCGGTCAATGGTGTGTGCGAGGGTCTCTTGAGACAACGAACGGAGCTGGTCGATGAGAATGCGGTCCGAGAGATCGAAATCTCTTCATAATTTCATGTTGCCGTGTTTGAAGTGGGGGAATCAAAAGCACTTGAGGTGCATGAAGGTGAATTCTAATGGTGTACAGGTCTCCGGCATGAATCGACAATCTCACTCCTCGAGATCGGAGGAGTCTACGGAGAGTAGGAGTCGGGAATCGGGCTCAGAGATGCGGATGTTCTTCAAGGATTTGGAGATGAGACCGAAGGTTTCGAAATCGATAATCAAGAAAACCGACGACGTCGGGATCGAGGCGGTCAGAGAGAAGCTTATGTTTGATCTGAAGACGGCGGCTGATAAAATGAAAGAGGCGATTTTAAGTAAGGAGGCAGTGGTGACCGGAGAAGAGGCGGAAGAGAAGAACGATTCTGCCGGAATGGAAGAGACGCCGGCGGCGGTTGCGTTATCGATGGCGGAGACCAGACCTTGGAATCTAAGGACGAGGAGAGCCGCCTGTAAGGCTCCGAATGTTGACGGTGGTGGAAGTAAGAATTTGAAGCTTGATGAGAAGAAATCGAATTCCAATTCCCCGTTGCGTAGTGACGGTGACGTCAAGTCACCTAGGTTGAAAATTGGGACGGAGAAGAAGAAGAAGAAGGTGAAATTGGTAGTGCCGCTCTCGAAGAGAGAGATCGATGAAGATTTCATGGAAATGGTGGGACTCAGACCACCGAGGCGGCCCAAGAAGAGGACCAGAATCGTACAAAAGCAATTAGATACGCTTTTTCCTGGGTTATGGCTGTCGGAGATCACAGCTGATTTGTATAAGGTCCCTGAATTACCTGAAAACGGCAAGGTGATGAAGGTTTGAAGTGCTACTTCTTTGCAGAGATTCAAAAACTTCCCCATTCATGTGCTGACTCCAGAGTAATTCATGGGTTTGATTGGTGATCATGCTGTATGCCCTGGCAGTTTGGTATCAACCACTGTTGAATCCCACCCGATAACTTGCGGTGTATGGTCTTCCTCTACTTTCAAATGCTAATTTTTGTTCATAAATTAATCTGGTTTTGCCTTTGCTAGACGTGGAATAATTCACAAAGAATAGGATTGGAGGAATTTGGAACTGGATAAAAGGACATTTTCTTGTATGATCTTGAGTGATACAATGTCTTGTGGAAAGCCCTGGTCAAGAAATGAATGTGTAGCATACTGTCATCATTTGGGAATATCAGTGCTTGAATATTGATGCATATTCATGTAGTTACTTACAGAATAGATTCAGTCAACTTGTGTTAGAAATGTCAAACTTGTTGTTTCAACACTTCACAGATCATTTCTTGTTAATATTGAACTTTTTTGTTTTGTTTCAGTTGAATGCCTTCGTTGAGTTCTAGGAAATTAGTTTCTTGCACAACCCTAGTTTGAAGCTGCAGTCTGC ATGAGAATGCGGTCCGAGAGATCGAAATCTCTTCATAATTTCATGTTGCCGTGTTTGAAGTGGGGGAATCAAAAGCACTTGAGGTGCATGAAGGTGAATTCTAATGGTGTACAGGTCTCCGGCATGAATCGACAATCTCACTCCTCGAGATCGGAGGAGTCTACGGAGAGTAGGAGTCGGGAATCGGGCTCAGAGATGCGGATGTTCTTCAAGGATTTGGAGATGAGACCGAAGGTTTCGAAATCGATAATCAAGAAAACCGACGACGTCGGGATCGAGGCGGTCAGAGAGAAGCTTATGTTTGATCTGAAGACGGCGGCTGATAAAATGAAAGAGGCGATTTTAAGTAAGGAGGCAGTGGTGACCGGAGAAGAGGCGGAAGAGAAGAACGATTCTGCCGGAATGGAAGAGACGCCGGCGGCGGTTGCGTTATCGATGGCGGAGACCAGACCTTGGAATCTAAGGACGAGGAGAGCCGCCTGTAAGGCTCCGAATGTTGACGGTGGTGGAAGTAAGAATTTGAAGCTTGATGAGAAGAAATCGAATTCCAATTCCCCGTTGCGTAGTGACGGTGACGTCAAGTCACCTAGGTTGAAAATTGGGACGGAGAAGAAGAAGAAGAAGGTGAAATTGGTAGTGCCGCTCTCGAAGAGAGAGATCGATGAAGATTTCATGGAAATGGTGGGACTCAGACCACCGAGGCGGCCCAAGAAGAGGACCAGAATCGTACAAAAGCAATTAGATACGCTTTTTCCTGGGTTATGGCTGTCGGAGATCACAGCTGATTTGTATAAGGTCCCTGAATTACCTGAAAACGGCAAGGTGATGAAGGTTTGA MRMRSERSKSLHNFMLPCLKWGNQKHLRCMKVNSNGVQVSGMNRQSHSSRSEESTESRSRESGSEMRMFFKDLEMRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVTGEEAEEKNDSAGMEETPAAVALSMAETRPWNLRTRRAACKAPNVDGGGSKNLKLDEKKSNSNSPLRSDGDVKSPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGLWLSEITADLYKVPELPENGKVMKV Homology
BLAST of CmaCh15G009200.1 vs. ExPASy TrEMBL
Match: A0A6J1K1T4 (uncharacterized protein LOC111489849 OS=Cucurbita maxima OX=3661 GN=LOC111489849 PE=4 SV=1) HSP 1 Score: 527.3 bits (1357), Expect = 3.8e-146 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. ExPASy TrEMBL
Match: A0A6J1FH75 (uncharacterized protein LOC111445662 OS=Cucurbita moschata OX=3662 GN=LOC111445662 PE=4 SV=1) HSP 1 Score: 512.7 bits (1319), Expect = 9.7e-142 Identity = 271/278 (97.48%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. ExPASy TrEMBL
Match: A0A6J1GNC6 (uncharacterized protein LOC111456072 OS=Cucurbita moschata OX=3662 GN=LOC111456072 PE=4 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 2.9e-130 Identity = 256/278 (92.09%), Postives = 260/278 (93.53%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. ExPASy TrEMBL
Match: A0A6J1I6T6 (uncharacterized protein LOC111470496 OS=Cucurbita maxima OX=3661 GN=LOC111470496 PE=4 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 9.4e-129 Identity = 254/278 (91.37%), Postives = 258/278 (92.81%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. ExPASy TrEMBL
Match: A0A1S3BDW1 (uncharacterized protein LOC103488593 OS=Cucumis melo OX=3656 GN=LOC103488593 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127 Identity = 253/279 (90.68%), Postives = 261/279 (93.55%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. NCBI nr
Match: XP_022994039.1 (uncharacterized protein LOC111489849 [Cucurbita maxima]) HSP 1 Score: 527.3 bits (1357), Expect = 7.9e-146 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. NCBI nr
Match: XP_023549495.1 (uncharacterized protein LOC111807980 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 513.8 bits (1322), Expect = 9.0e-142 Identity = 272/278 (97.84%), Postives = 273/278 (98.20%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. NCBI nr
Match: XP_022939951.1 (uncharacterized protein LOC111445662 [Cucurbita moschata]) HSP 1 Score: 512.7 bits (1319), Expect = 2.0e-141 Identity = 271/278 (97.48%), Postives = 272/278 (97.84%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. NCBI nr
Match: KAG6579213.1 (hypothetical protein SDJN03_23661, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 508.1 bits (1307), Expect = 4.9e-140 Identity = 268/276 (97.10%), Postives = 270/276 (97.83%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. NCBI nr
Match: KAG7016725.1 (hypothetical protein SDJN02_21835, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 485.0 bits (1247), Expect = 4.5e-133 Identity = 256/264 (96.97%), Postives = 258/264 (97.73%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. TAIR 10
Match: AT1G68340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 148.3 bits (373), Expect = 9.2e-36 Identity = 113/270 (41.85%), Postives = 151/270 (55.93%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. TAIR 10
Match: AT1G25370.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 147.5 bits (371), Expect = 1.6e-35 Identity = 107/269 (39.78%), Postives = 149/269 (55.39%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. TAIR 10
Match: AT3G18295.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26 Identity = 98/270 (36.30%), Postives = 131/270 (48.52%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. TAIR 10
Match: AT3G60410.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14 Identity = 85/286 (29.72%), Postives = 128/286 (44.76%), Query Frame = 0
BLAST of CmaCh15G009200.1 vs. TAIR 10
Match: AT3G60410.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-14 Identity = 85/286 (29.72%), Postives = 128/286 (44.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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