CmaCh15G007950.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTGGTGGACGGCCATGGCTGACTCAGCTCAAAGCTTCATGTTTCAATGTCTCACCATTTTCACTCACTCCATATATAAGAGTTGGAGGAAGAACATCGATCATCCACCCTCACTCCTTTACCTTGTACATTAATTCATACATACAACTAGAAAGCAGAAGAAAATGGATGCTTTGATGACACGAGAAGTCGCCGGGATCCTCGTTGGCTCCATGGCGTTTCAGCCGGTTGAGAAGTCGCTGAAGAGACTGTTGCCTGCTCCGATCGGTAGTCAATCTCCCGATGGCGAACCCCGGGCGACGAAACAATGTAAAGCTTCTATTTCTTTTTTTCTTTCCTTGGGTTGATGTCTATGTGTATTTGTTGTGAGGGTGAATGGAGATTGAATGGAGAGTTTTATAAATGTTTGCAGGTAGAGAGGATGCAGTTGTTAGCAGGGGGAGCAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGGTAAGCTCTTTTTCACAATATGGTTCTTTCATAACAAATCAAATCCATGAGGCTTATAATTAAGACTATCAACATCCCACTAAACCAACTCAAAAATGATTGTTCTTCAATCAAATTATTTTAGGACAGCCCAAACCCACTGCTAGCAGATATTGTCCTCTTTAGACTTTTCCTTTCGGGTTTCCTCACGATTTTGAAATACGTCTGTTAGGAAGAGGTTTCCACACCTTTATAAAAAATGTTTCATTCCCCTTTCCAGCCGATGTGGGATCTCACAATCCACCCCTCTTATGGGCTCAGCGTCCTTGCTAGCACTTGTTCCCCTCTCCAATTGATGTGAGATCTTACAATCAACCCCCTTCGAGGCTCAACATCCTCGTTGGCACACCGTCCGATGTCTGGTTCTAATACCATTTGTAACAACTTAAGCCCAACGCTAGCAAGATATTGTCCTCTTTGGGTTTTCCCTTCTGGGTTTCTCCTCAAGGTTTTAAAACTTGTTTGCTAGGGAGAGGTTTCCACACGCTTATTAAAAATGTATCGTTTCCCTCTCTAATCGAAGTACAACATAGAAGCCTTGAACTTATGTTTGTATTGTTTGGTTTGTCAAGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAGGGAAAGTTGAACTTGGGAGCAAAGATTCTTCAAGTTGGTGGGTTGAGGAAAGTTTACAAGCAGTTATTTAGTGTAAGAGAAGGAGAGAAGTTATTGAAGGCTTGTCAATGCCATTTGTCAACAACAACAGGACCTCTTTCAGGTCTTCTCTTCATATCCACACACAAATTAGCTTTTTGCAGTGACAAATCACTCAAACTTTCTTCCCCAACTGGAGAGCTCCTAAGATTTCATTACAAGGTAACAACCTATCTCTCTCTTCGATCCACTATTTGTTTATGAGAGAAAAACATTCTTATTAGGTCTCCCCTCATCTGGCTCTATGCAGGCTTAACCGCCGCACCTAGTTTACAAGGAGACAATGTAAGATGAGTAGTTTGTCTCGGGATTAGTTCCTTGAAGGACCAACTAATTATTAGTAAAGTCATGTTCGAAAAGGGAACAAACCCGTCTTAGGTCAAAAAAAGTTATGGTTAAAATTTTCTTTCAAACGTAAAGTTGTCTCGAGTTAGATGTTTACTAAACTGGTTGTGATGTTGGTGCAGGTAGTGATTCCAATGGGGAGGATAGAGAGAGTGAATCAAAGTAAGAATGTGATGAAGCCTTCACAGAAATACTTGGAGATAGTAACGGTGGATAATTTTGATTTCTGGTTCATGGGGTTCCAAAATTTTCAAAAAACATTCAGATTTCTTCAACAAGCTATCTCTCATGAGTGGAAGACTAACTGCTAGTTACGTTTGGAACTTGGAAGAATATGTTTAGCAGAAGTGTTTTCTTTTCTATTCTATTCCTTTCGGTTTCCTTGTGCTTCCTAGGATTTACTTAATGGAGCCAAGGAAAGCTAGATAGATACATTTGTCTCAATTTGTACAAATTTCAATTAGTATCAATGTAAGTTGATATATATTATATGTATGTTTGGTGTTAGCTTCTCCAAATTTATAGTCACTCAAATTTTTAGAATCATGGGGTGACTTTGTTTATGTTATACGCATGCACCCTCTCGTGCTCGTTCAACAGCACAAGCCGAG ATCTTGGTGGACGGCCATGGCTGACTCAGCTCAAAGCTTCATGTTTCAATGTCTCACCATTTTCACTCACTCCATATATAAGAGTTGGAGGAAGAACATCGATCATCCACCCTCACTCCTTTACCTTGTACATTAATTCATACATACAACTAGAAAGCAGAAGAAAATGGATGCTTTGATGACACGAGAAGTCGCCGGGATCCTCGTTGGCTCCATGGCGTTTCAGCCGGTTGAGAAGTCGCTGAAGAGACTGTTGCCTGCTCCGATCGGTAGTCAATCTCCCGATGGCGAACCCCGGGCGACGAAACAATGTAGAGAGGATGCAGTTGTTAGCAGGGGGAGCAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAGGGAAAGTTGAACTTGGGAGCAAAGATTCTTCAAGTTGGTGGGTTGAGGAAAGTTTACAAGCAGTTATTTAGTGTAAGAGAAGGAGAGAAGTTATTGAAGGCTTGTCAATGCCATTTGTCAACAACAACAGGACCTCTTTCAGGTCTTCTCTTCATATCCACACACAAATTAGCTTTTTGCAGTGACAAATCACTCAAACTTTCTTCCCCAACTGGAGAGCTCCTAAGATTTCATTACAAGGTAGTGATTCCAATGGGGAGGATAGAGAGAGTGAATCAAAGTAAGAATGTGATGAAGCCTTCACAGAAATACTTGGAGATAGTAACGGTGGATAATTTTGATTTCTGGTTCATGGGGTTCCAAAATTTTCAAAAAACATTCAGATTTCTTCAACAAGCTATCTCTCATGAGTGGAAGACTAACTGCTAGTTACGTTTGGAACTTGGAAGAATATGTTTAGCAGAAGTGTTTTCTTTTCTATTCTATTCCTTTCGGTTTCCTTGTGCTTCCTAGGATTTACTTAATGGAGCCAAGGAAAGCTAGATAGATACATTTGTCTCAATTTGTACAAATTTCAATTAGTATCAATGTAAGTTGATATATATTATATGTATGTTTGGTGTTAGCTTCTCCAAATTTATAGTCACTCAAATTTTTAGAATCATGGGGTGACTTTGTTTATGTTATACGCATGCACCCTCTCGTGCTCGTTCAACAGCACAAGCCGAG ATGGATGCTTTGATGACACGAGAAGTCGCCGGGATCCTCGTTGGCTCCATGGCGTTTCAGCCGGTTGAGAAGTCGCTGAAGAGACTGTTGCCTGCTCCGATCGGTAGTCAATCTCCCGATGGCGAACCCCGGGCGACGAAACAATGTAGAGAGGATGCAGTTGTTAGCAGGGGGAGCAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAGGGAAAGTTGAACTTGGGAGCAAAGATTCTTCAAGTTGGTGGGTTGAGGAAAGTTTACAAGCAGTTATTTAGTGTAAGAGAAGGAGAGAAGTTATTGAAGGCTTGTCAATGCCATTTGTCAACAACAACAGGACCTCTTTCAGGTCTTCTCTTCATATCCACACACAAATTAGCTTTTTGCAGTGACAAATCACTCAAACTTTCTTCCCCAACTGGAGAGCTCCTAAGATTTCATTACAAGGTAGTGATTCCAATGGGGAGGATAGAGAGAGTGAATCAAAGTAAGAATGTGATGAAGCCTTCACAGAAATACTTGGAGATAGTAACGGTGGATAATTTTGATTTCTGGTTCATGGGGTTCCAAAATTTTCAAAAAACATTCAGATTTCTTCAACAAGCTATCTCTCATGAGTGGAAGACTAACTGCTAG MDALMTREVAGILVGSMAFQPVEKSLKRLLPAPIGSQSPDGEPRATKQCREDAVVSRGSKVGSFAHGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLLKACQCHLSTTTGPLSGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVNQSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHEWKTNC Homology
BLAST of CmaCh15G007950.1 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.0e-53 Identity = 103/186 (55.38%), Postives = 141/186 (75.81%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.5e-52 Identity = 103/168 (61.31%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 204.9 bits (520), Expect = 9.6e-52 Identity = 100/166 (60.24%), Postives = 131/166 (78.92%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.1e-50 Identity = 96/163 (58.90%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.5e-28 Identity = 57/147 (38.78%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy TrEMBL
Match: A0A6J1JWI9 (GEM-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 5.7e-124 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy TrEMBL
Match: A0A6J1FIY0 (GEM-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 6.3e-123 Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy TrEMBL
Match: A0A6J1JT11 (putative GEM-like protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy TrEMBL
Match: A0A6J1FE51 (putative GEM-like protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 1.7e-120 Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. ExPASy TrEMBL
Match: A0A5D3CXS2 (GEM-like protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00560 PE=3 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109 Identity = 205/227 (90.31%), Postives = 210/227 (92.51%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. NCBI nr
Match: XP_022993511.1 (GEM-like protein 4 isoform X1 [Cucurbita maxima]) HSP 1 Score: 453.4 bits (1165), Expect = 1.2e-123 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. NCBI nr
Match: XP_022938453.1 (GEM-like protein 4 isoform X1 [Cucurbita moschata] >XP_023551579.1 GEM-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122 Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. NCBI nr
Match: XP_022993512.1 (putative GEM-like protein 8 isoform X2 [Cucurbita maxima]) HSP 1 Score: 445.3 bits (1144), Expect = 3.2e-121 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. NCBI nr
Match: XP_022938454.1 (putative GEM-like protein 8 isoform X2 [Cucurbita moschata] >XP_023551580.1 putative GEM-like protein 8 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 441.8 bits (1135), Expect = 3.5e-120 Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. NCBI nr
Match: XP_038875315.1 (putative GEM-like protein 8 [Benincasa hispida]) HSP 1 Score: 413.3 bits (1061), Expect = 1.4e-111 Identity = 207/227 (91.19%), Postives = 216/227 (95.15%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 209.9 bits (533), Expect = 2.1e-54 Identity = 103/186 (55.38%), Postives = 141/186 (75.81%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 207.6 bits (527), Expect = 1.0e-53 Identity = 103/168 (61.31%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 204.9 bits (520), Expect = 6.8e-53 Identity = 100/166 (60.24%), Postives = 131/166 (78.92%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 199.9 bits (507), Expect = 2.2e-51 Identity = 96/163 (58.90%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of CmaCh15G007950.1 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29 Identity = 57/147 (38.78%), Postives = 92/147 (62.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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