CmaCh12G002640.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G002640.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	la protein 1-like
Location	Cma_Chr12: 1349049 .. 1354226 (-)
Sequence length	1620
RNA-Seq Expression	CmaCh12G002640.1
Synteny	CmaCh12G002640.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATTCTACGGCACGATGTTATACAAACGTGGGCCGGATCATGGAAAATAAACCGAACCCGGTTTATATTAGGCACTTTAAAATCTATATTAATAGCTTTAAATACGAGCCTACCAAATTCAGTCCTCGTACTCGAAATCGAAACCCTACTATCTGGTCTGCTGCTTCTCTCTTCCCGCCCGCGTTTTTTCTCCGTCTCAGAAGCTCATTCCGATCATGGAGAATTCTTCTCTCGATCAAGAGACCACGAAGAAAGTGCTTCGTCAGGTTAAACGCGTTCAAAATCTCTCTTCATGTAAAGTTCTAGTCGTTTTCTTTCAAATGTTCATCTGTTTGATGTTTCTTCTTCAGGTCGAGTTCTATTTCAGCGACAGTAATCTTCCCAGAGATGGTTTTCTTAAGAAAACTATTAGCGCAAGCACCGATGGAAGTATCCTTTACCTTGTGCCATTACGTGTTTATTCGTTTTTTTCTTCTTTGGTCCGTTTATCTTGCTTTCATGTTGAATGACAATAGTCTGTTTCAGCATTCGTTTTGATTTTAATTTGGATAGTGTTCTTCGTTTGTGCTACCTTCGAAGGTCTTTTGTTGATCTTAACTGGAAAATTACAGTGGTGGATTTGTCTTTAGTTTGTTCGTTTTCTCGGATGAAAGGCCATCTTCATTTGGCTCAGGACGTGAAACCGGACGCGATTCCAGAAGATACTCTAAAAGCTGTTGCTGAAACTCTGAAAAGCTCTTCAACTATCAAAGTTTCTGAAGATGGTTAGGTTCTTAATCTTATAATTGATGAACTCGTCATTTATATTTGACTGTTGAGGAATTGTCTATTGCATTACATAATTTAATCAGAGTAGGAGTTCATGCTATAAAAACTGTTAAGGTCTATGTTTGTGTAAGTGATAAATAAAAATCTTACGTTTTTATATTGATGATGCAGAATCCTTCCAGAAAATTCATTTGAAAATATCAACTTACTTCATTATTAAGATTAGCTCCTGCTCTGTAATTCGCTGTTATGGATTGTTCTGAACTTTTTATATTATCATTTGATTGAGTTTGGGCTTTGTATTGTACAGGGAAGAAGATTGGTAGAATTGCTGAACTCTCAAAGCCTGAGGAGATGATAGAGCAATTGGATGATAGAACCATTGCTGCATCGCCGTTTCAATATGATGTCAAGCTCGAAGATGTAGAAGCTTTTTTTGGTCAAATCGCGAAGGTAGATTCTTTGTTGTTATCGATTCATTGTTCATGTCAGAATGCCCTTGGGTTTAGATATGTTTTGAATACATAAGCTCTTTCCAATTACCTTTTAGTAGCTTTGTCTTTGAACAATTTCATGAAAAGTTGTGAAAATTTAAAATTGCCAAAGTCTGAAACTACAATTCCTCCTGTTTTTCCCCCTGAATTCCTGGCATTAAGCTGGTTGTTTTGTTATCTTGTTATTCACAACACATCAAATGCTCAAATCCTGATCTGTCAGTCTTAATTGGGTTTTTATCACGGCTCTTTGTCATGGTATCTTTTTTTTTTTCATCATTTATATCGTTGAGCATTAGAATTTTCCCACTGATCTTCAGGTCAACAGTGTGAGGTTGCCCCGCCATGTTTCAGATAAACGTGTATTCTGTGGAACTGCCTTGGTAGAGTTTTCTGCTGAAGAAGATGCAGAAAAAGTATTGGCGGAAAGCTTGCTTTATGCTGGTGCCAAGTTAGAATTAAAACCAAAGTAAGTCCGTGTTGAAATACGATAAGCTCGTACATCATACTCCTCAGTGTGATGCTACAAATCTGTGCCTTTCCTTTAGGCTTTTTTCCTTTCAAGCATTGATTCTGTTATTCTATTTGGTATGTATGTGGAAAGACATAAAACATATTGATTATCTAAGCTTATTTGAAAATTTTAGGCATTAATTTAATATTCAACTTAGACGTATCATTCAACTGCGTTTGTAAAGATTATTCCCATTTCAGGAGGGATTTTGATGAGGAGAGATCAAAAGAGACGGAGAAGTTTGAAAGTTCACGCTCGAATGCGAGTTCAAACTGGAAGAACAATAATTCCTCGGAATCAAAGTATGTTATGTTAGCCATACAGTTCTCCTGGTTTCATATCACTTGGTCTTACTCATGATTATTGCAGCTACCCGAAAGGCTTAATTGTCGCCTTTACACTGAAAAAGATGACAGCCGGAAGTTCTGCTGAGGAAAATGGATCTCATGATGTAACCACTGATAAGACTGAATGCAAAACAGACGAAGGATTAGATTCTTCAAAGAATGACTCTGAGATAACTGATCAAACAGGGGGAGAAAACGTGGGTAAAAATGAAGAAATCCAGAAGAGTTCTGATGATAAGATCGAAGAAGCTGATAAGAAAAATGATTCGGGCAATGAAGAAAAACCTGAAGTGGAAGATCAGTCTATGGATGATCCCACCGACGAACGTGAAGAGGCTGAAGAAAAACCCACATTTGCCTCATCTAGAAACGACAAGAACGTTGTTTCACGCGAGGATTTGAAGGCTATTTTTCAGAAGTTCGGAAGTATCAAGGTATCTCATAGATTCTTCTTCATTGAATTGCTGTGTTCATCAGAATGTTTAAAGAATATTTATTGTTCTATTTCGACTTTGAATCATGCTTTTGATGTTCGTATTGCTTCATTGTTTTCAGTTCTTATATGCATGCCAATTTATAAAGATTATCCGTTCTGACACATCTTCATCTTCCTCTTGTTTTACTCTCTTTCTGTTCATTGGTTGGGATGATGAAGTACATTGATTTTAAGATGGGAGAAGAGTCTGGTTATATCAGGTTTGATGAGCCTGAAGCTGCCCAGAAGGCTCGTGCGGCTGCAGTCCTTGCTGATCAAGGGGGATTGGCTGTGAAAAATTTTATAGCCACTTTAGAACCAGTTTCAGGTACCATACAATCTTCCACTGTTCTTTGAGCATGGAGCAAAGTAATGTTGAATGTGCCGAGATTATCTTCCTTGCTCCTTTCCCATGTCCGATTGAGCGTTTTCTTGATCTCAGGTGAGGCTGAGAAGGAGTATTGGAGAGCGCTCCGCAGCAGCCAAGAAAAGCATCATCGTGATTATAAGGGCAACCGTGGAAGGTTTGTTTTATAAACGACGACAATTAGTGTCTTATTCGAATTGGTTGGTTACTGAAAACTAATGTGGATCGTCCATGCTTCTCTGCTGCTGCGTGCTATTTCTACAGGGGTGGTAAATTCAATAGAGGTGGCAAGCATGGTCGGTCGAGAGGATACGACAACAACCGAGGTCGTCCGAACAAAGCTCAGAAAGTTTGAGCTGCCTGTGCCTGCCTGCATGCCTGCTGTGTCTTATGGCCAGCTCTGTTACAATTTTGGAGGAAAGACTCTTGGCGATGGATCTCTCTACCTCTACTGGTCTTTTTATTTATCAGCTTCGTGTTTAGTTTAGGGTTGTCTGTGTTTTTTTTTGAATTTTTATTCGATAATATCTGAAAATTAAACATATAAAGCTACTAACTAAATTTAAAATCCCTATTTTGTTGTTCTTTCCCCACTTTACAAGTTTTTTCCTCAAAATAGTGAAAATCTTTGCTTGTTCGAAACGAAATGGTATAGAGGCTTCTCTGCCGAAAAGGAGTGGCTGTCTGATACTTTTGTTGTGTAAAATTCGAGTTCGAAATTTAACCTCAAGTTTTGAAAACAATAAAGGCTTTTTTTTTTTTTTCTCCAAAAAATCAAGTGTTTTAAGTTCTTTTTTTTTTTCCTTTAAATATTTCAAATGCGTAATTAATAATTATGATAATAAAAAAAAAATTTAAACTATTATAATCATTAAAAAATCACATTTCAGCCAGACTAATTCAATAACATTAAATGAATACATATATGGAAAGAGTACTCAAAGAATTATGTAACTAAAACAAAACAATTAATTTATTATTTTTTCTAAAAACATTAAATGAAAATGAAAATTAAAATTGACAATAAATTAAATGTTAAGAGTTGAACCTATTTTGAGTGAGAGATTCAAATCTTTAATTTATTATGGTAGAGAAATATCAATTAATCTTTGATGTATTTTTAAAAATTATTATTATTATGTAAATAACAAAAACCATATGATAAGTTCAAATTTCATAAATGTGGTTAATGGGCTAAATAGATATCAGCATCAAAGTTTAGGTAACCTTAAATTAATGAGACGATTAACATAGCTACACACGTTTCGAGTTGGGACAATTAGAGGAAATTATTTTAAATTTGAAATGATTTTTTTTTTTTTTTAATTTTTAAATGCCCGTTGAAATTGAAATTTTCGAAAAGAACCGGTCGGATTTTGGTTTTAGGTACAGTAAATGGGGATTTCTCTCCTAGGCGTTAAATCGACGACGGTCCAGCATTTCAAAAAGCTTTGATTGACTTTAACCCATAGGGTTTGAATCTCCCAGTCCGCCCTCTTACGTATTTGAATATGGCTCCTCTCTGATCTCGCTCATCTTCTCCTTCTCTATCTCCCTCTCTCTCTCTCTCTCGCTCTCTCGCCTTTTCGCGTTCTCAGTTCTCCCTTGGATCTGCTCGTGCTCCAGGTATTTACCGATTGCAATGTCCAGGTTTTCAACATCTTCATCTTGTTCATCTGCATTTCGATTTTGTAAGTCAAGTAGGCGAAGAAGTTTCTATAAACGTTCCATTTCTGCCGAGTTTTTAACTTCGATGTGCTATCTGACTATGAAATCTGTCTAATCGGACCTTTTTTCAATCGGTGATTTGTATCTGCCTACTACTTTTAGTTTTGTTTGATTCGATTATGATTTTGATGATTTCTGGTGTTTCATCTGGAGTGTTTCTTTAGTTTAATCTTAAGTTTAGCTCCGATTCCTATTCGTCGGAGCTTAGACGATTTTGTTCCTTCCGAATTTGCGAGAGAAACTTCATGCGAGTTTAATTAGTAACTTTTTTTTTTTTTTTTTTTTTTTTAAATTGAAATTCCTAAGATCTACAATCGTAATGGTTGAGACGACGGATTCAGATATGAAGATTTCATACTATCTTTAATTTGATCTTTTAGTACCGTTTTATTGACTTCAGTTGCTCCATTTCAGGAATCGCGTCTGACGAGTTCCATCGTATATGTTCCGTTTCTGCCGTCCATCGGATTTTCGAATGA

mRNA sequence

ATGGCCGATTCTACGGCACGATGTTATACAAACTCCTCGTACTCGAAATCGAAACCCTACTATCTGGTCTGCTGCTTCTCTCTTCCCGCCCGCGTTTTTTCTCCGTCTCAGAAGCTCATTCCGATCATGGAGAATTCTTCTCTCGATCAAGAGACCACGAAGAAAGTGCTTCGTCAGGTCGAGTTCTATTTCAGCGACAGTAATCTTCCCAGAGATGGTTTTCTTAAGAAAACTATTAGCGCAAGCACCGATGGAATGGTGGATTTGTCTTTAGTTTGTTCGTTTTCTCGGATGAAAGGCCATCTTCATTTGGCTCAGGACGTGAAACCGGACGCGATTCCAGAAGATACTCTAAAAGCTGTTGCTGAAACTCTGAAAAGCTCTTCAACTATCAAAGTTTCTGAAGATGGGAAGAAGATTGGTAGAATTGCTGAACTCTCAAAGCCTGAGGAGATGATAGAGCAATTGGATGATAGAACCATTGCTGCATCGCCGTTTCAATATGATGTCAAGCTCGAAGATGTAGAAGCTTTTTTTGGTCAAATCGCGAAGGTCAACAGTGTGAGGTTGCCCCGCCATGTTTCAGATAAACGTGTATTCTGTGGAACTGCCTTGGTAGAGTTTTCTGCTGAAGAAGATGCAGAAAAAGTATTGGCGGAAAGCTTGCTTTATGCTGGTGCCAAGTTAGAATTAAAACCAAAGAGGGATTTTGATGAGGAGAGATCAAAAGAGACGGAGAAGTTTGAAAGTTCACGCTCGAATGCGAGTTCAAACTGGAAGAACAATAATTCCTCGGAATCAAACTACCCGAAAGGCTTAATTGTCGCCTTTACACTGAAAAAGATGACAGCCGGAAGTTCTGCTGAGGAAAATGGATCTCATGATGTAACCACTGATAAGACTGAATGCAAAACAGACGAAGGATTAGATTCTTCAAAGAATGACTCTGAGATAACTGATCAAACAGGGGGAGAAAACGTGGGTAAAAATGAAGAAATCCAGAAGAGTTCTGATGATAAGATCGAAGAAGCTGATAAGAAAAATGATTCGGGCAATGAAGAAAAACCTGAAGTGGAAGATCAGTCTATGGATGATCCCACCGACGAACGTGAAGAGGCTGAAGAAAAACCCACATTTGCCTCATCTAGAAACGACAAGAACGTTGTTTCACGCGAGGATTTGAAGGCTATTTTTCAGAAGTTCGGAAGTATCAAGAACCAGTTTCAGGTGAGGCTGAGAAGGAGTATTGGAGAGCGCTCCGCAGCAGCCAAGAAAAGCATCATCGTGATTATAAGGGCAACCGTGGAAGGGGTGGTAAATTCAATAGAGGTGGCAAGCATGGTCGGTCGAGAGGATACGACAACAACCGAGGTCGTCCGAACAAAGCTCAGAAAGTTTGAGCTGCCTGTGCCTGCCTGCATGCCTGCTGTGTCTTATGGCCAGCTCTGTTACAATTTTGGAGGAAAGACTCTTGGCGATGGATCTCTCTACCTCTACTGGTCTTTTTATTTATCAGCTTCGTGTTTATTCTCCCTTGGATCTGCTCGTGCTCCAGGAATCGCGTCTGACGAGTTCCATCGTATATGTTCCGTTTCTGCCGTCCATCGGATTTTCGAATGA

Coding sequence (CDS)

ATGGCCGATTCTACGGCACGATGTTATACAAACTCCTCGTACTCGAAATCGAAACCCTACTATCTGGTCTGCTGCTTCTCTCTTCCCGCCCGCGTTTTTTCTCCGTCTCAGAAGCTCATTCCGATCATGGAGAATTCTTCTCTCGATCAAGAGACCACGAAGAAAGTGCTTCGTCAGGTCGAGTTCTATTTCAGCGACAGTAATCTTCCCAGAGATGGTTTTCTTAAGAAAACTATTAGCGCAAGCACCGATGGAATGGTGGATTTGTCTTTAGTTTGTTCGTTTTCTCGGATGAAAGGCCATCTTCATTTGGCTCAGGACGTGAAACCGGACGCGATTCCAGAAGATACTCTAAAAGCTGTTGCTGAAACTCTGAAAAGCTCTTCAACTATCAAAGTTTCTGAAGATGGGAAGAAGATTGGTAGAATTGCTGAACTCTCAAAGCCTGAGGAGATGATAGAGCAATTGGATGATAGAACCATTGCTGCATCGCCGTTTCAATATGATGTCAAGCTCGAAGATGTAGAAGCTTTTTTTGGTCAAATCGCGAAGGTCAACAGTGTGAGGTTGCCCCGCCATGTTTCAGATAAACGTGTATTCTGTGGAACTGCCTTGGTAGAGTTTTCTGCTGAAGAAGATGCAGAAAAAGTATTGGCGGAAAGCTTGCTTTATGCTGGTGCCAAGTTAGAATTAAAACCAAAGAGGGATTTTGATGAGGAGAGATCAAAAGAGACGGAGAAGTTTGAAAGTTCACGCTCGAATGCGAGTTCAAACTGGAAGAACAATAATTCCTCGGAATCAAACTACCCGAAAGGCTTAATTGTCGCCTTTACACTGAAAAAGATGACAGCCGGAAGTTCTGCTGAGGAAAATGGATCTCATGATGTAACCACTGATAAGACTGAATGCAAAACAGACGAAGGATTAGATTCTTCAAAGAATGACTCTGAGATAACTGATCAAACAGGGGGAGAAAACGTGGGTAAAAATGAAGAAATCCAGAAGAGTTCTGATGATAAGATCGAAGAAGCTGATAAGAAAAATGATTCGGGCAATGAAGAAAAACCTGAAGTGGAAGATCAGTCTATGGATGATCCCACCGACGAACGTGAAGAGGCTGAAGAAAAACCCACATTTGCCTCATCTAGAAACGACAAGAACGTTGTTTCACGCGAGGATTTGAAGGCTATTTTTCAGAAGTTCGGAAGTATCAAGAACCAGTTTCAGGTGAGGCTGAGAAGGAGTATTGGAGAGCGCTCCGCAGCAGCCAAGAAAAGCATCATCGTGATTATAAGGGCAACCGTGGAAGGGGTGGTAAATTCAATAGAGGTGGCAAGCATGGTCGGTCGAGAGGATACGACAACAACCGAGGTCGTCCGAACAAAGCTCAGAAAGTTTGAGCTGCCTGTGCCTGCCTGCATGCCTGCTGTGTCTTATGGCCAGCTCTGTTACAATTTTGGAGGAAAGACTCTTGGCGATGGATCTCTCTACCTCTACTGGTCTTTTTATTTATCAGCTTCGTGTTTATTCTCCCTTGGATCTGCTCGTGCTCCAGGAATCGCGTCTGACGAGTTCCATCGTATATGTTCCGTTTCTGCCGTCCATCGGATTTTCGAATGA

Protein sequence

MADSTARCYTNSSYSKSKPYYLVCCFSLPARVFSPSQKLIPIMENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFGSIKNQFQVRLRRSIGERSAAAKKSIIVIIRATVEGVVNSIEVASMVGREDTTTTEVVRTKLRKFELPVPACMPAVSYGQLCYNFGGKTLGDGSLYLYWSFYLSASCLFSLGSARAPGIASDEFHRICSVSAVHRIFE

Homology

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BLAST of CmaCh12G002640.1 vs. ExPASy Swiss-Prot
Match: Q93ZV7 (La protein 1 OS=Arabidopsis thaliana OX=3702 GN=LA1 PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 8.8e-80
Identity = 180/365 (49.32%), Postives = 242/365 (66.30%), Query Frame = 0


Query: 48  LDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLAQD 107
           L +ET K VLRQVEFYFSDSNLP D FLKKT++ S DG+V L+L+CSFS+M+G+L L  D
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLG-D 65

Query: 108 VKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASPFQ 167
            K D IPEDT+KAVA+TL++SS +K+S+DGKK+GR  EL K E++IEQL+ RT+AASPF 
Sbjct: 66  SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 168 YDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYAGA 227
           YDVK EDVE+FF Q  KVNSVR+PRHV++ R+F G ALVEF  EEDA+ V+ ++L++AG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 228 KLELKPKRDFDEERSKETEKFE-------SSRSNASSNWKNNNSSESNYPKGLIVAFTLK 287
           +LELKPK++FD ER K+  KF        S+     S+ KNN++ E +YPKGLI++FTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 288 KMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDK 347
           +                        +EG    K+  E TD+T  E+  K  +        
Sbjct: 246 R----------------------SAEEGTTEQKSSEEPTDKTMEESETKPAD-------- 305

Query: 348 IEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQK 406
             +ADK+N        EV+ +  +D  DE+   EEK   A+ +++K+VV REDLKA+F K
Sbjct: 306 TPDADKENTG------EVQAEGAEDEDDEK---EEKGALATHKDNKDVVLREDLKAVFGK 330

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy Swiss-Prot
Match: Q0V7U7 (La protein 2 OS=Arabidopsis thaliana OX=3702 GN=LA2 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.4e-55
Identity = 147/361 (40.72%), Postives = 212/361 (58.73%), Query Frame = 0


Query: 46  SSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLA 105
           SS ++ET KK+L QVEFYFSDSNLP DGFL + ++ S DG+V L LVCSFSRM+  L L 
Sbjct: 3   SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLG 62

Query: 106 QDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASP 165
            ++  + IP   ++ VA  L++S  +KVS +G++IGR  +LSKPEE++EQ+  RT+AASP
Sbjct: 63  -NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122

Query: 166 FQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYA 225
           F+Y +K+EDV +FF Q AKVNSVRLP +++DKR FCGTALVEFS+E+D + +L +SL+YA
Sbjct: 123 FEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYA 182

Query: 226 GAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKMTAG 285
           GA L L PK DFD +R    ++   S S+            + + +G IV F LK +   
Sbjct: 183 GADLVLIPKSDFDCQRENMIKQLGKSESH------------NEFRRGQIVKFALKWI--- 242

Query: 286 SSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIEEAD 345
                  S +  T+K      E   + KN                 +I++  D +   AD
Sbjct: 243 ------ASEEKVTNK------EKPSALKN-----------------KIKEKEDKETGIAD 302

Query: 346 KKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFGSIK 405
           ++ ++G+     +      D TD+              N+ N VS E LK +FQ+FGS++
Sbjct: 303 REKENGDNSCASL----CKDNTDQ--------LVVPPWNNSNSVSSEVLKDLFQRFGSVE 306

Query: 406 N 407
           +
Sbjct: 363 H 306

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy Swiss-Prot
Match: P33399 (La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=LHP1 PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-16
Identity = 89/274 (32.48%), Postives = 127/274 (46.35%), Query Frame = 0


Query: 51  ETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLAQDVKP 110
           E   + L+QVEFYFS+ N P D FL +T +   DG V +S + +F+RMK +       +P
Sbjct: 28  EVLDRCLKQVEFYFSEFNFPYDRFL-RTTAEKNDGWVPISTIATFNRMKKY-------RP 87

Query: 111 DAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAEL---SKPEEMIEQLDDRTIAASPFQ 170
                  +  V E L+SS  ++VS DG+ + R   L   +     IEQ + RT+A   F 
Sbjct: 88  -------VDKVIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQ-NQRTLAVMNFP 147

Query: 171 Y-DVKL-------EDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLA 230
           + DV+        E++EAFF ++ ++N VRL R   +K+ F GT LVEF    + E  L 
Sbjct: 148 HEDVEASQIPELQENLEAFFKKLGEINQVRLRRDHRNKK-FNGTVLVEFKTIPECEAFLK 207

Query: 231 ---------ESLLYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYP 290
                    E L Y G KL +  K+ FD +R     K  S RS +      N   + N P
Sbjct: 208 SYSNDDESNEILSYEGKKLSVLTKKQFDLQREASKSKNFSGRSRSF-----NGHKKKNLP 267

Query: 291 KGLIVAFTLKKMTAGSSAEENGSHDVTTDKTECK 305
           K     F   K   G    +  S  +  D  E K
Sbjct: 268 K-----FPKNKKKNGKEESKEDSSAIADDDEEHK 274

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy Swiss-Prot
Match: Q7ZWE3 (La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.5e-06
Identity = 85/324 (26.23%), Postives = 145/324 (44.75%), Query Frame = 0


Query: 56  VLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLAQDVKPDAIPE 115
           V +QVEF+F D NL +D F+K  I  S DG +D++++ +F+RMK   +L  DV       
Sbjct: 46  VKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMK---NLTADV------- 105

Query: 116 DTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASPFQYDVKLEDV 175
              K +A  LK+S+ ++V+++G +I R   L    E  + +D RT+        V    +
Sbjct: 106 ---KLIARALKNSTIVEVNDEGTRIRRKEPLG---ETPKDVDSRTVYVELLPKTVTHIWL 165

Query: 176 EAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYAGAKLELKPKR 235
           E  F +   V  + +PR+ S  R   G A VEF  +E A+K + E L         KP  
Sbjct: 166 ERVFSKCGHVVYISIPRYKS-TRHSKGFAFVEFETQEQAQKAV-EMLNNPPEDAPRKP-G 225

Query: 236 DFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKMTAGSSAEENGSHD 295
            F +   K+   F++   +   + K   +   N                 S++EE GS++
Sbjct: 226 IFPKTCRKKAVPFDAVTQDNDEDGKKKKTELKN-----------------STSEETGSNN 285

Query: 296 VTTDKTECKTDEGLDSSKNDSEITDQTGGENVGK---NEEIQKSSDDKIEEADKKNDSGN 355
           +  D      +  + S  N + +T     +   K   ++  + SS +   E   K     
Sbjct: 286 MDQDG---MLESTVTSEPNLATLTSTVSKKAKKKRLRSQSFEASSGEDQFEMSSKMRKVE 330

Query: 356 EEKPEVEDQSMDDPTDEREEAEEK 377
           EEK E++D S ++  +E    ++K
Sbjct: 346 EEKSELKDLSSENKDEELNSLKKK 330

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy TrEMBL
Match: A0A6J1KQ54 (la protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496200 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 2.2e-190
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL
Sbjct: 1   MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
           HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM
Sbjct: 181 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 342
           TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 300

Query: 343 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 402
           EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG
Sbjct: 301 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 360

Query: 403 SIK 406
           SIK
Sbjct: 361 SIK 363

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy TrEMBL
Match: A0A6J1GIM1 (la protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454576 PE=4 SV=1)

HSP 1 Score: 654.8 bits (1688), Expect = 3.1e-184
Identity = 352/363 (96.97%), Postives = 356/363 (98.07%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLKKTI AS DGMVDLSLVCSFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
           HLAQDVKPDAIPEDT+KAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEM+EQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVL ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELK KRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAF LKKM
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFALKKM 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 342
           TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSE T+QTGGENVGK+EEIQKSSDDKIE
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTGGENVGKDEEIQKSSDDKIE 300

Query: 343 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 402
           EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG
Sbjct: 301 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 360

Query: 403 SIK 406
           SIK
Sbjct: 361 SIK 363

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy TrEMBL
Match: A0A6J1HHB2 (la protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462923 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 7.9e-148
Identity = 293/364 (80.49%), Postives = 321/364 (88.19%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLKKTIS   DGMVDLSL+C+FSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIADGMVDLSLICTFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
            L QDVKP+ IPEDTLKAVAETL+SSSTIKVSEDGKKIGR  EL KPEE+IEQLDD+TIA
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPF+YDVKLEDVEAFF QIAKVNSVRLPRHV+DKRVFCGTALVEFS EEDAEKVL ESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSTEEDAEKVLKESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELKPKRDFD ER+KETE+FESSR+N+S+N KNNN  ESNYPKGLIVAFTLK +
Sbjct: 181 LYAGAKLELKPKRDFDAERAKETEEFESSRANSSANRKNNNPPESNYPKGLIVAFTLKSV 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGE-NVGKNEEIQKSSDDKI 342
           ++GSSAEENGSH V  DKTECK DE LDSSKNDSE T+  G E N+ K+EEI KS+DD  
Sbjct: 241 SSGSSAEENGSHGVAADKTECKPDERLDSSKNDSEKTEIIGEEANMSKDEEI-KSADDNN 300

Query: 343 EEADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKF 402
            EADKKND GNEE+PEVE+++ +D  DE EE EEKPT A S+N+ NVVSREDLK IFQKF
Sbjct: 301 GEADKKNDLGNEERPEVEERTTNDTVDEHEEDEEKPTAAKSKNNMNVVSREDLKVIFQKF 360

Query: 403 GSIK 406
           GS+K
Sbjct: 361 GSVK 363

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy TrEMBL
Match: A0A6J1K750 (la protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492255 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.8e-147
Identity = 294/364 (80.77%), Postives = 321/364 (88.19%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLKKTIS   DGMVDLSL+C+FSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTISGIPDGMVDLSLICTFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
            L QDVKP+ IPEDTLKAVAETL+SSSTIKVSEDGKKIGR  EL KPEE+IEQLDD+TIA
Sbjct: 61  KLKQDVKPEEIPEDTLKAVAETLRSSSTIKVSEDGKKIGRTTELPKPEELIEQLDDKTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPF+YDVKLEDVEAFF QIAKVNSVRLPRHV+DKRVFCGTALVEFS EEDAEKVL ESL
Sbjct: 121 ASPFEYDVKLEDVEAFFNQIAKVNSVRLPRHVADKRVFCGTALVEFSNEEDAEKVLKESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELKPKRDFD+ER+KETE+FESSR+N+S+N KNNN  ESNYPKGLIVAFTLK +
Sbjct: 181 LYAGAKLELKPKRDFDKERAKETEEFESSRANSSANRKNNNPPESNYPKGLIVAFTLKSV 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGE-NVGKNEEIQKSSDDKI 342
           ++GSSAEENGSH V  DKTECKTDE LDSSKNDSE T Q   E N+ K+EEI KS+DD  
Sbjct: 241 SSGSSAEENGSHCVAADKTECKTDERLDSSKNDSEKTKQIWEEANMSKDEEI-KSADDNN 300

Query: 343 EEADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKF 402
            EADKKND GNEEKPEVE+++ +D  DE EE EEKPT A  +N+ NVVSREDLK IFQKF
Sbjct: 301 GEADKKNDLGNEEKPEVEERTTNDTVDEHEEDEEKPTAAKFKNNMNVVSREDLKVIFQKF 360

Query: 403 GSIK 406
           GS+K
Sbjct: 361 GSVK 363

[Close]

BLAST of CmaCh12G002640.1 vs. ExPASy TrEMBL
Match: A0A5A7VFC4 (La protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003520 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.0e-139
Identity = 274/365 (75.07%), Postives = 315/365 (86.30%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MEN+SLDQE  KKVLRQVEFYFSDSNLPRDGFL+K+IS S DGMVDLSL+C+F+RMKGHL
Sbjct: 1   MENTSLDQEKAKKVLRQVEFYFSDSNLPRDGFLRKSISESPDGMVDLSLICTFTRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
            L QDV P+  PEDTLKAVAETL++SS++KVSEDGKK+GR  EL KPEE+IEQLDDRT+A
Sbjct: 61  ELKQDVTPEDFPEDTLKAVAETLRTSSSLKVSEDGKKVGRATELPKPEELIEQLDDRTVA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPF+YD+KLEDVEAFF ++ KVNSVRLPRHV+DKRVFCGTAL+EFS EEDAEKVL ESL
Sbjct: 121 ASPFEYDIKLEDVEAFFDRVTKVNSVRLPRHVADKRVFCGTALIEFSTEEDAEKVLKESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSS-ESNYPKGLIVAFTLKK 282
           +YAGAKLELKPKR+FDEER+KE EKFESSRS   +N  NNNSS ES+YPKGLIVAFTLK 
Sbjct: 181 VYAGAKLELKPKREFDEERAKEMEKFESSRSTLGANRSNNNSSPESSYPKGLIVAFTLKS 240

Query: 283 MTAGSSAEENGSHDVTTDKTECKTDEGL-DSSKNDSEITDQTGGENVGKNEEIQKSSDDK 342
            ++G+SAEEN SH V  DKTECKTDEGL DSSKND E T+Q    N+ K+EEI+KS+DDK
Sbjct: 241 TSSGNSAEENESHGVAADKTECKTDEGLEDSSKNDPEKTEQIEETNLSKDEEIKKSADDK 300

Query: 343 IEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQK 402
             EA++KND+GNE   EVE+Q MD   DE+EEAEEKPT   SRN+ NVVSREDLKA+FQK
Sbjct: 301 NGEAEEKNDTGNERSLEVEEQCMDGTVDEQEEAEEKPTALKSRNNMNVVSREDLKAVFQK 360

Query: 403 FGSIK 406
           FGS+K
Sbjct: 361 FGSVK 365

[Close]

BLAST of CmaCh12G002640.1 vs. NCBI nr
Match: XP_023002329.1 (la protein 1-like [Cucurbita maxima])

HSP 1 Score: 675.2 bits (1741), Expect = 4.5e-190
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL
Sbjct: 1   MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
           HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM
Sbjct: 181 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 342
           TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 300

Query: 343 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 402
           EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG
Sbjct: 301 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 360

Query: 403 SIK 406
           SIK
Sbjct: 361 SIK 363

[Close]

BLAST of CmaCh12G002640.1 vs. NCBI nr
Match: XP_023537626.1 (la protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 660.2 bits (1702), Expect = 1.5e-185
Identity = 355/363 (97.80%), Postives = 358/363 (98.62%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLKKTI AS DGMVDLSLVCSFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
           HLAQDVKPDAIPEDT+KAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAF LKKM
Sbjct: 181 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFALKKM 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 342
           TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSE T+QTGGENVGK+EEIQKSSDDKIE
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTGGENVGKDEEIQKSSDDKIE 300

Query: 343 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 402
           EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG
Sbjct: 301 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 360

Query: 403 SIK 406
           SIK
Sbjct: 361 SIK 363

[Close]

BLAST of CmaCh12G002640.1 vs. NCBI nr
Match: XP_022951846.1 (la protein 1-like [Cucurbita moschata])

HSP 1 Score: 654.8 bits (1688), Expect = 6.3e-184
Identity = 352/363 (96.97%), Postives = 356/363 (98.07%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLKKTI AS DGMVDLSLVCSFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
           HLAQDVKPDAIPEDT+KAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEM+EQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMLEQLDDRTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVL ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELK KRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAF LKKM
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFALKKM 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 342
           TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSE T+QTGGENVGK+EEIQKSSDDKIE
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTGGENVGKDEEIQKSSDDKIE 300

Query: 343 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 402
           EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG
Sbjct: 301 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 360

Query: 403 SIK 406
           SIK
Sbjct: 361 SIK 363

[Close]

BLAST of CmaCh12G002640.1 vs. NCBI nr
Match: KAG6585400.1 (La protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 644.8 bits (1662), Expect = 6.5e-181
Identity = 349/363 (96.14%), Postives = 353/363 (97.25%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLKKTI AS DGMVDLSLVCSFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
           HLAQDVKPDAIPEDT+KAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVL ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELK KRDFDEERSKETEKFESSRSNASS+WKNNNSSESNYPKGLIVAF LKKM
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSSWKNNNSSESNYPKGLIVAFALKKM 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 342
           TAGSSAEENGSHDVTTDKTECKTDE LDSSKNDSE T+QT GENVGK+EEIQKSSDDKIE
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEELDSSKNDSEKTEQTRGENVGKDEEIQKSSDDKIE 300

Query: 343 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 402
           EADKKNDSGN EKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG
Sbjct: 301 EADKKNDSGNGEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 360

Query: 403 SIK 406
           SIK
Sbjct: 361 SIK 363

[Close]

BLAST of CmaCh12G002640.1 vs. NCBI nr
Match: KAG7020316.1 (La protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.4 bits (1661), Expect = 8.6e-181
Identity = 349/363 (96.14%), Postives = 353/363 (97.25%), Query Frame = 0


Query: 43  MENSSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHL 102
           MENSSLDQET KKVLRQVEFYFSDSNLPRDGFLKKTI AS DGMVDLSLVCSFSRMKGHL
Sbjct: 1   MENSSLDQETAKKVLRQVEFYFSDSNLPRDGFLKKTIGASPDGMVDLSLVCSFSRMKGHL 60

Query: 103 HLAQDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 162
           HLAQDVKPDAIPEDT+KAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA
Sbjct: 61  HLAQDVKPDAIPEDTVKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIA 120

Query: 163 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESL 222
           ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVL ESL
Sbjct: 121 ASPFQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLTESL 180

Query: 223 LYAGAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKM 282
           LYAGAKLELK KRDFDEERSKETEKFESSRSNASS+WKNNNSSESNYPKGLIVAF LKKM
Sbjct: 181 LYAGAKLELKSKRDFDEERSKETEKFESSRSNASSSWKNNNSSESNYPKGLIVAFALKKM 240

Query: 283 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIE 342
           TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSE T+QT GENVGK+EEIQKSSDDKIE
Sbjct: 241 TAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEKTEQTRGENVGKDEEIQKSSDDKIE 300

Query: 343 EADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 402
           EADKKNDSG  EKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG
Sbjct: 301 EADKKNDSGIGEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFG 360

Query: 403 SIK 406
           SIK
Sbjct: 361 SIK 363

[Close]

BLAST of CmaCh12G002640.1 vs. TAIR 10
Match: AT4G32720.1 (La protein 1 )

HSP 1 Score: 299.3 bits (765), Expect = 6.3e-81
Identity = 180/365 (49.32%), Postives = 242/365 (66.30%), Query Frame = 0


Query: 48  LDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLAQD 107
           L +ET K VLRQVEFYFSDSNLP D FLKKT++ S DG+V L+L+CSFS+M+G+L L  D
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLG-D 65

Query: 108 VKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASPFQ 167
            K D IPEDT+KAVA+TL++SS +K+S+DGKK+GR  EL K E++IEQL+ RT+AASPF 
Sbjct: 66  SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 168 YDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYAGA 227
           YDVK EDVE+FF Q  KVNSVR+PRHV++ R+F G ALVEF  EEDA+ V+ ++L++AG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 228 KLELKPKRDFDEERSKETEKFE-------SSRSNASSNWKNNNSSESNYPKGLIVAFTLK 287
           +LELKPK++FD ER K+  KF        S+     S+ KNN++ E +YPKGLI++FTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 288 KMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDK 347
           +                        +EG    K+  E TD+T  E+  K  +        
Sbjct: 246 R----------------------SAEEGTTEQKSSEEPTDKTMEESETKPAD-------- 305

Query: 348 IEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQK 406
             +ADK+N        EV+ +  +D  DE+   EEK   A+ +++K+VV REDLKA+F K
Sbjct: 306 TPDADKENTG------EVQAEGAEDEDDEK---EEKGALATHKDNKDVVLREDLKAVFGK 330

[Close]

BLAST of CmaCh12G002640.1 vs. TAIR 10
Match: AT4G32720.2 (La protein 1 )

HSP 1 Score: 299.3 bits (765), Expect = 6.3e-81
Identity = 180/365 (49.32%), Postives = 242/365 (66.30%), Query Frame = 0


Query: 48  LDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLAQD 107
           L +ET K VLRQVEFYFSDSNLP D FLKKT++ S DG+V L+L+CSFS+M+G+L L  D
Sbjct: 6   LTEETAKTVLRQVEFYFSDSNLPIDDFLKKTVTESEDGLVSLALICSFSKMRGYLKLG-D 65

Query: 108 VKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASPFQ 167
            K D IPEDT+KAVA+TL++SS +K+S+DGKK+GR  EL K E++IEQL+ RT+AASPF 
Sbjct: 66  SKGDDIPEDTIKAVADTLRTSSALKISDDGKKVGRSTELLKLEDLIEQLNARTVAASPFS 125

Query: 168 YDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYAGA 227
           YDVK EDVE+FF Q  KVNSVR+PRHV++ R+F G ALVEF  EEDA+ V+ ++L++AG 
Sbjct: 126 YDVKREDVESFFSQYGKVNSVRMPRHVAESRIFSGVALVEFPTEEDAQNVMKQNLVFAGQ 185

Query: 228 KLELKPKRDFDEERSKETEKFE-------SSRSNASSNWKNNNSSESNYPKGLIVAFTLK 287
           +LELKPK++FD ER K+  KF        S+     S+ KNN++ E +YPKGLI++FTLK
Sbjct: 186 ELELKPKKEFDNEREKDEVKFANYQPQKGSANQKNGSDHKNNSAYEPDYPKGLIISFTLK 245

Query: 288 KMTAGSSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDK 347
           +                        +EG    K+  E TD+T  E+  K  +        
Sbjct: 246 R----------------------SAEEGTTEQKSSEEPTDKTMEESETKPAD-------- 305

Query: 348 IEEADKKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQK 406
             +ADK+N        EV+ +  +D  DE+   EEK   A+ +++K+VV REDLKA+F K
Sbjct: 306 TPDADKENTG------EVQAEGAEDEDDEK---EEKGALATHKDNKDVVLREDLKAVFGK 330

[Close]

BLAST of CmaCh12G002640.1 vs. TAIR 10
Match: AT1G79880.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 217.2 bits (552), Expect = 3.1e-56
Identity = 147/361 (40.72%), Postives = 212/361 (58.73%), Query Frame = 0


Query: 46  SSLDQETTKKVLRQVEFYFSDSNLPRDGFLKKTISASTDGMVDLSLVCSFSRMKGHLHLA 105
           SS ++ET KK+L QVEFYFSDSNLP DGFL + ++ S DG+V L LVCSFSRM+  L L 
Sbjct: 3   SSFNEETAKKLLTQVEFYFSDSNLPTDGFLNREVTKSKDGLVSLPLVCSFSRMRNLLGLG 62

Query: 106 QDVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASP 165
            ++  + IP   ++ VA  L++S  +KVS +G++IGR  +LSKPEE++EQ+  RT+AASP
Sbjct: 63  -NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASP 122

Query: 166 FQYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYA 225
           F+Y +K+EDV +FF Q AKVNSVRLP +++DKR FCGTALVEFS+E+D + +L +SL+YA
Sbjct: 123 FEYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYA 182

Query: 226 GAKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKMTAG 285
           GA L L PK DFD +R    ++   S S+            + + +G IV F LK +   
Sbjct: 183 GADLVLIPKSDFDCQRENMIKQLGKSESH------------NEFRRGQIVKFALKWI--- 242

Query: 286 SSAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIEEAD 345
                  S +  T+K      E   + KN                 +I++  D +   AD
Sbjct: 243 ------ASEEKVTNK------EKPSALKN-----------------KIKEKEDKETGIAD 302

Query: 346 KKNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFGSIK 405
           ++ ++G+     +      D TD+              N+ N VS E LK +FQ+FGS++
Sbjct: 303 REKENGDNSCASL----CKDNTDQ--------LVVPPWNNSNSVSSEVLKDLFQRFGSVE 306

Query: 406 N 407
           +
Sbjct: 363 H 306

[Close]

BLAST of CmaCh12G002640.1 vs. TAIR 10
Match: AT1G79880.2 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 146.0 bits (367), Expect = 8.9e-35
Identity = 109/300 (36.33%), Postives = 166/300 (55.33%), Query Frame = 0


Query: 107 DVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASPF 166
           ++  + IP   ++ VA  L++S  +KVS +G++IGR  +LSKPEE++EQ+  RT+AASPF
Sbjct: 9   NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPF 68

Query: 167 QYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYAG 226
           +Y +K+EDV +FF Q AKVNSVRLP +++DKR FCGTALVEFS+E+D + +L +SL+YAG
Sbjct: 69  EYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAG 128

Query: 227 AKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKMTAGS 286
           A L L PK DFD +R    ++   S S+            + + +G IV F LK +    
Sbjct: 129 ADLVLIPKSDFDCQRENMIKQLGKSESH------------NEFRRGQIVKFALKWI---- 188

Query: 287 SAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIEEADK 346
                 S +  T+K      E   + KN                 +I++  D +   AD+
Sbjct: 189 -----ASEEKVTNK------EKPSALKN-----------------KIKEKEDKETGIADR 248

Query: 347 KNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFGSIKN 406
           + ++G+     +      D TD+              N+ N VS E LK +FQ+FGS+++
Sbjct: 249 EKENGDNSCASL----CKDNTDQ--------LVVPPWNNSNSVSSEVLKDLFQRFGSVEH 252

[Close]

BLAST of CmaCh12G002640.1 vs. TAIR 10
Match: AT1G79880.3 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 146.0 bits (367), Expect = 8.9e-35
Identity = 109/300 (36.33%), Postives = 166/300 (55.33%), Query Frame = 0


Query: 107 DVKPDAIPEDTLKAVAETLKSSSTIKVSEDGKKIGRIAELSKPEEMIEQLDDRTIAASPF 166
           ++  + IP   ++ VA  L++S  +KVS +G++IGR  +LSKPEE++EQ+  RT+AASPF
Sbjct: 9   NINREDIPPRIVEEVANLLRTSDFLKVSNNGQRIGRGTKLSKPEEVLEQVHRRTLAASPF 68

Query: 167 QYDVKLEDVEAFFGQIAKVNSVRLPRHVSDKRVFCGTALVEFSAEEDAEKVLAESLLYAG 226
           +Y +K+EDV +FF Q AKVNSVRLP +++DKR FCGTALVEFS+E+D + +L +SL+YAG
Sbjct: 69  EYSIKMEDVSSFFSQYAKVNSVRLPPNIADKRRFCGTALVEFSSEQDTQDILRQSLVYAG 128

Query: 227 AKLELKPKRDFDEERSKETEKFESSRSNASSNWKNNNSSESNYPKGLIVAFTLKKMTAGS 286
           A L L PK DFD +R    ++   S S+            + + +G IV F LK +    
Sbjct: 129 ADLVLIPKSDFDCQRENMIKQLGKSESH------------NEFRRGQIVKFALKWI---- 188

Query: 287 SAEENGSHDVTTDKTECKTDEGLDSSKNDSEITDQTGGENVGKNEEIQKSSDDKIEEADK 346
                 S +  T+K      E   + KN                 +I++  D +   AD+
Sbjct: 189 -----ASEEKVTNK------EKPSALKN-----------------KIKEKEDKETGIADR 248

Query: 347 KNDSGNEEKPEVEDQSMDDPTDEREEAEEKPTFASSRNDKNVVSREDLKAIFQKFGSIKN 406
           + ++G+     +      D TD+              N+ N VS E LK +FQ+FGS+++
Sbjct: 249 EKENGDNSCASL----CKDNTDQ--------LVVPPWNNSNSVSSEVLKDLFQRFGSVEH 252

The following BLAST results are available for this feature:

BLAST of CmaCh12G002640.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZV7	8.8e-80	49.32	La protein 1 OS=Arabidopsis thaliana OX=3702 GN=LA1 PE=1 SV=1	[more]
Q0V7U7	4.4e-55	40.72	La protein 2 OS=Arabidopsis thaliana OX=3702 GN=LA2 PE=1 SV=1	[more]
P33399	1.1e-16	32.48	La protein homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=5...	[more]
Q7ZWE3	6.5e-06	26.23	La-related protein 7 OS=Danio rerio OX=7955 GN=larp7 PE=2 SV=1	[more]

BLAST of CmaCh12G002640.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KQ54	2.2e-190	100.00	la protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496200 PE=4 SV=1	[more]
A0A6J1GIM1	3.1e-184	96.97	la protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454576 PE=4 SV=1	[more]
A0A6J1HHB2	7.9e-148	80.49	la protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462923 PE=4 SV=1	[more]
A0A6J1K750	1.8e-147	80.77	la protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492255 PE=4 SV=1	[more]
A0A5A7VFC4	1.0e-139	75.07	La protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003520 P...	[more]

BLAST of CmaCh12G002640.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023002329.1	4.5e-190	100.00	la protein 1-like [Cucurbita maxima]	[more]
XP_023537626.1	1.5e-185	97.80	la protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951846.1	6.3e-184	96.97	la protein 1-like [Cucurbita moschata]	[more]
KAG6585400.1	6.5e-181	96.14	La protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7020316.1	8.6e-181	96.14	La protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh12G002640.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32720.1	6.3e-81	49.32	La protein 1	[more]
AT4G32720.2	6.3e-81	49.32	La protein 1	[more]
AT1G79880.1	3.1e-56	40.72	RNA recognition motif (RRM)-containing protein	[more]
AT1G79880.2	8.9e-35	36.33	RNA recognition motif (RRM)-containing protein	[more]
AT1G79880.3	8.9e-35	36.33	RNA recognition motif (RRM)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 341..361
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..267
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..330
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 45..406
None	No IPR available	PANTHER	PTHR22792:SF79	OS02G0610400 PROTEIN	coord: 45..406
None	No IPR available	CDD	cd12291	RRM1_La	coord: 160..232 e-value: 1.0851E-12 score: 61.4474
None	No IPR available	CDD	cd08030	LA_like_plant	coord: 52..142 e-value: 4.56622E-40 score: 138.291
IPR002344	Lupus La protein	PRINTS	PR00302	LUPUSLA	coord: 85..100 score: 32.39 coord: 59..76 score: 69.7 coord: 200..218 score: 33.01
IPR006630	La-type HTH domain	SMART	SM00715	la	coord: 50..143 e-value: 8.5E-29 score: 111.7
IPR006630	La-type HTH domain	PFAM	PF05383	La	coord: 56..126 e-value: 1.0E-19 score: 70.3
IPR006630	La-type HTH domain	PROSITE	PS50961	HTH_LA	coord: 46..150 score: 22.571587
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 160..232 e-value: 0.0095 score: 24.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 167..219 e-value: 1.5E-6 score: 28.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 159..244 score: 9.643862
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 44..147 e-value: 1.4E-24 score: 87.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 152..249 e-value: 1.9E-13 score: 52.3
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 150..236
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 50..143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh12G002640	CmaCh12G002640	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G002640.1:exon:1962	CmaCh12G002640.1:exon:1962	exon
CmaCh12G002640.1:exon:1961	CmaCh12G002640.1:exon:1961	exon
CmaCh12G002640.1:exon:1960	CmaCh12G002640.1:exon:1960	exon
CmaCh12G002640.1:exon:1959	CmaCh12G002640.1:exon:1959	exon
CmaCh12G002640.1:exon:1958	CmaCh12G002640.1:exon:1958	exon
CmaCh12G002640.1:exon:1957	CmaCh12G002640.1:exon:1957	exon
CmaCh12G002640.1:exon:1956	CmaCh12G002640.1:exon:1956	exon
CmaCh12G002640.1:exon:1955	CmaCh12G002640.1:exon:1955	exon
CmaCh12G002640.1:exon:1954	CmaCh12G002640.1:exon:1954	exon
CmaCh12G002640.1:exon:1953	CmaCh12G002640.1:exon:1953	exon
CmaCh12G002640.1:exon:1952	CmaCh12G002640.1:exon:1952	exon
CmaCh12G002640.1:exon:1951	CmaCh12G002640.1:exon:1951	exon
CmaCh12G002640.1:exon:1950	CmaCh12G002640.1:exon:1950	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_13	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_12	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_11	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_10	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_9	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_8	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_7	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_6	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_5	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_4	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_3	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds_2	CDS
CmaCh12G002640.1:cds	CmaCh12G002640.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh12G002640.1	CmaCh12G002640.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003729	mRNA binding