Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGACTTTATTAAGATAGAGAATCAGTAGCAAAGGATTCTATCGTTGCCCTTTCGACTGTGTCCACTCTTTCTCCATGGAGCCCAGGAATTTGGAATCATGAGCCTCCATTAATAAGCTTTTTGAAGGTTCCGAGAGCTGAGTTCTTGTGGCCTTTTGTTGTTTTTTCCGATACTCTTGAAGCCAATTCTGAATCACAGGTTTGTTTCTTTTAGCTGTTCTTGAAACACTTTTCTTCCGCTTTTATCTGCCTCAGATTCGCTTTTCTTTTTGTTGAATCAGCCAATTTTCGGTACTGAGCTGTTTCCTTTTGCTTCCAGTATTGTACCATTGAATAGTTTTTTTCACTCTCTAATTCTAGTGATTATTTTGTTGTATTCATACTAATTTGCAATGCTTTCTTGATCCGATCATGAATTTGTTCCTTAAATCTTTAGGGTTTTATCTAAAATTAAATAGCCATTGCTTCTGCCCTGTCTACACTTTTTAATTCTTCGTTTGTAATTGTTGTGAAAGATTTGAAGCACAAACTAAAGCATGGAAGAGAAGAGTGGAATCAAGAAAGATATCACTGAAGTAATTCTCTCTTACTATGAATCTTTGAATATTTTTGAACTTGTTTGCATGTTCTTGATGTTCTTGAACTTTGCTCACTTTGATAGCATTCTTTCATTTGCAGTTAATTGGTAATACTCCTATGGTATATCTAAATAAAATGGCTGATGGTTGTTTTGCTCGTATCGCTGCTAAGTTAGAGACGATGGAGCCGTGTTCTAGCGTTAAAGACAGGTTGAGAATCTTTCTTTGTTATATAAGTCGATGGCCTGTATGATAACGTTTGTGGAGCCGTGTTCTAACGTTTCTAGGACCTAGTACTAATGTAATTTTCCGATGTTTGTTACGAGGGATTTTTGCGATGTTTAAATGTACAAGTTTTTCGATGTAGGATTGCGCATAGTATGATTCAAGATGCTGAGGATAAAGGCCTGATTACACCAGGGAAGGTACTATAAAATGCTTCATTTCTTTCTGTACCATTAAAATTTAGGCCACCACTTTGTATCGTTACGTATCACGGTTAAACTCAAGGTTTTAAAACGCATCTACTAGAGAGAGGTTTCCATACCTTTATAAGGAATGTTTCATTTCCCTCTCTCCAACCGATGTGGGATCTCACAATCCACTCCCGTTGTAGGCTCAACATCCTTGATGGCACACTGCTCGATGTCTGGCTCTAATATCATTTGTAACACTAGCAGATATTGTCCGCTTTGACCCGTTATGTATCGTCATCAGCCTCACCATTTGTAATAGCCCAAGCCCAAAATCGTGAGTCTGACAACGATACGTAACGGGTCAAAGTGGACAATATCGGCTAGTGGTGGGCTTGGGCTATTACAAATAGTATCAGAGCTAGTCACTGGACAGTGCGAGACACTAGTCGGAGTAGGGCTAGACCCTCTCCATAATAGATGCGTTTTAAGACCGTGAAGCTAACAGCGATATGTAACGGATCAAAGTTGACAATATCTACTAGCGGTGGGCTTGAGCAGTTACATTGTTTGTGCTCGGTGACTATAATGCCTTGTAAAACAATTGCTAAACTTAAAGTCATGCATTTGATTCGTTACGTAATCTGTCTTATATATTCTTTTTGGTGGAAAAAAGACTGTCCTCGTCGAGATAACGAGCGGTAACACAGGCATTGCATTGGCAGGCATCGCAGCTGTGAAGGGCTATAGGCTTATTATAGTTATGCCAGCTTCGTATAGTCTTGAAAGACGAATTCTGCTTCTAGCTTTTGGAGCTGAGTTGCACATCACAGACCCTGCACTGGGGCTTGAAGGCCTTCTAAAGAAGGTTGGGGAGATAATGGAAGCCACTCCCAACAGCTATTTTCTGAAGCAATTTGATAATCCAGCAAACCCAAAGGTATGATTTGTTTTGATTTGTGATCCCAAAAAGATATATAACTGAGTCAATTTGCATCCATTTCTGTTATTTAGATTCATTATGAAACCACTGGGCCAGAGATATGGAAAGATTCAGGAGGAAAAGTCGATGTGTTGGTCGTGGGGATTGGAACCGGAGGAACAATAACTGGCACAGGGAATTTTCTTAAGGAACAGAATCCAGACATTAAGGTTCGTTTCTTAGTTTGCTGCTCTAAAACCCAACACTGTCAAGTTGTTTGGTAACGTTTTCGTTTCTTATTTCTTGCTTCTTAGTAAAAACTAAGCATAAAATAAGAAATAAGAACGTCACCAAACGACCAAATGGGCTGTTATTATTCAGGAGATCGATCAACCTTTATATACAATGTAGGTTTATGCAGTGGAACCAGCAGAGAGTGCAGTGCTAAGTGGGGAACAACCTGGTGAGCTCCCATTCTGAAGCAAATTTTATTATTTTAGAATAATTTACAAAATTGAACATAAATATCACAGCGCTCGTATGGAAATCGAGCAGCTTAAAAATATATACCATTTAAATCAAGTAGCGCCTAAAGATCATACGAAAACACTTTCTCATGATGATTAAATGATTTTAGCCAAAGTTTGTATGCTAACATTTTCTCATGGTGATTACAGGCAAGCATCTAATTCAAGGCATTGGGGCTGGCTTCATCCCAGCTATTCTTGATCTCAAAGTCTTTGATGAAGTCTTTAAGGTGCACCTTGAACTTATTTGTCCAAAGAAATTCTTTTGATCGGTTCTCTGTTTTGCAATATTGTTTTAGATATGATCTAAACAAAAATTATATGATCATGTTAGCACACAATATGACTCAAAAGTTTGCTTAAGAGACGAGGTCTTTTTGCCCCTTTTAAGATTTCTTGCAACGTTTCCATGTACAATTATGACTCAAAAGTTAGCTTAAGAGACAAGGCCTTTAACCCTTTTTGAGTTCAACAATATGGGTGAAAATTTGAACCTTTTACCAACAATGCCTTAACTAGTTGAGCTATGCTCAAGAGTTGGGCAAGTGATTGAAACTTTCCCTTTAATTTTTAAATAAACAACGAAGTCTTTATACCTTTTAAGCCAGACATTGGAAGGTGTGCCAGTGAGGACACTAAGTCCTGAAAGGCGATGTACCAGTGAGGATGCTGGCCCCAAAGGGGATGGATTGTGAGATCTCATATCGGTTGAAGAGGGAAACAAAACATTACTTATAAGGGTGTCGAAACATCTCCCTAATAGACTCGTTTTAAAAACCTTGAGGGAAAGCCCAAAAAAGACAATATCTGTTAACAGTGGGCTTGAGTTGTTAAACTTTGAATGTAGAATAAACCAACGCTCTTCTCGTCTTCCCCATTATACATTTATGCTTGCAATTAGTCATGTAGACGAGTTCCGACCTCTCAAATTTCCTAAATGGCTTTGTTTTCCTACTTTCTCTTCTAATATAGCATTTACAAGTTGGCAGGAATGTCCTTATTTTTTGAGGTAGTAATGCAAATTTGGGTGTGTTCAGGTGACAAGTGAGGAAGCCATTGAAACTGCAAGGCTTCTTGCACTAAAAGAAGGCCTCCTAGTATGTTACTTTATCTATGAGACACTTATTTGATGTATTTTTGTGAAAATATAGATATTTCTTTTCTCTTTTCTGTTGTAGGTGGGGATTTCATCTGGTGCAGCAGCAGCTGCTGCAATAAAGGTTGCAAAGAGACCAGAAAATGAAGGAAAACTCGTTGTTGTAAGCCATATTTTACTTTCATTTCCAAATCAAACATCAAACATCAAGTCTTTGCAACAAAATTTACATCTTTTATTCTGTGATCCATTTGTAGGTCATCTTCCCGAGCTTCGGTGAGCGATATCTCTCGACGACGCTTTTTGATTCCATCAGGCATCAAGCAGAAAACATGACTTATCTATGAATGGAATGATTTGGAATTTTTTCATGTACTTTTATGTAATCAAATACTACCAATATGGGTTGCCGCAAGTGTCAAAATTAGTGCAACTTATTTTAGATGGAATTAATCAACTGGTTAACCCATTCACCCTTTTAGGAGGAATAGTTTATTGCAGTAGTGTTTTTGTTGGAACTATTTATATGATTTATTTTTGTTTAAATAGGAGTCCTTGGCTTAGTAAAACACAAGCCACAATAGTTCATTATTTCAGTTGTCGCTGAATTACCTTCGTTGAGTAATAATAATTTTGTATTTATTCACACCTTTGAGCGTGAGATATTGTGATAGTTGGTATCAGAACCAAGTTGATATGGTTGAAATTATTAC
mRNA sequence
GAGACTTTATTAAGATAGAGAATCAGTAGCAAAGGATTCTATCGTTGCCCTTTCGACTGTGTCCACTCTTTCTCCATGGAGCCCAGGAATTTGGAATCATGAGCCTCCATTAATAAGCTTTTTGAAGGTTCCGAGAGCTGAGTTCTTGTGGCCTTTTGTTGTTTTTTCCGATACTCTTGAAGCCAATTCTGAATCACAGATTTGAAGCACAAACTAAAGCATGGAAGAGAAGAGTGGAATCAAGAAAGATATCACTGAATTAATTGGTAATACTCCTATGGTATATCTAAATAAAATGGCTGATGGTTGTTTTGCTCGTATCGCTGCTAAGTTAGAGACGATGGAGCCGTGTTCTAGCGTTAAAGACAGGATTGCGCATAGTATGATTCAAGATGCTGAGGATAAAGGCCTGATTACACCAGGGAAGACTGTCCTCGTCGAGATAACGAGCGGTAACACAGGCATTGCATTGGCAGGCATCGCAGCTGTGAAGGGCTATAGGCTTATTATAGTTATGCCAGCTTCGTATAGTCTTGAAAGACGAATTCTGCTTCTAGCTTTTGGAGCTGAGTTGCACATCACAGACCCTGCACTGGGGCTTGAAGGCCTTCTAAAGAAGGTTGGGGAGATAATGGAAGCCACTCCCAACAGCTATTTTCTGAAGCAATTTGATAATCCAGCAAACCCAAAGATTCATTATGAAACCACTGGGCCAGAGATATGGAAAGATTCAGGAGGAAAAGTCGATGTGTTGGTCGTGGGGATTGGAACCGGAGGAACAATAACTGGCACAGGGAATTTTCTTAAGGAACAGAATCCAGACATTAAGGTTTATGCAGTGGAACCAGCAGAGAGTGCAGTGCTAAGTGGGGAACAACCTGGCAAGCATCTAATTCAAGGCATTGGGGCTGGCTTCATCCCAGCTATTCTTGATCTCAAAGTCTTTGATGAAGTCTTTAAGGTGACAAGTGAGGAAGCCATTGAAACTGCAAGGCTTCTTGCACTAAAAGAAGGCCTCCTAGTGGGGATTTCATCTGGTGCAGCAGCAGCTGCTGCAATAAAGGTTGCAAAGAGACCAGAAAATGAAGGAAAACTCGTTGTTGTCATCTTCCCGAGCTTCGGTGAGCGATATCTCTCGACGACGCTTTTTGATTCCATCAGGCATCAAGCAGAAAACATGACTTATCTATGAATGGAATGATTTGGAATTTTTTCATGTACTTTTATGTAATCAAATACTACCAATATGGGTTGCCGCAAGTGTCAAAATTAGTGCAACTTATTTTAGATGGAATTAATCAACTGGTTAACCCATTCACCCTTTTAGGAGGAATAGTTTATTGCAGTAGTGTTTTTGTTGGAACTATTTATATGATTTATTTTTGTTTAAATAGGAGTCCTTGGCTTAGTAAAACACAAGCCACAATAGTTCATTATTTCAGTTGTCGCTGAATTACCTTCGTTGAGTAATAATAATTTTGTATTTATTCACACCTTTGAGCGTGAGATATTGTGATAGTTGGTATCAGAACCAAGTTGATATGGTTGAAATTATTAC
Coding sequence (CDS)
ATGGAAGAGAAGAGTGGAATCAAGAAAGATATCACTGAATTAATTGGTAATACTCCTATGGTATATCTAAATAAAATGGCTGATGGTTGTTTTGCTCGTATCGCTGCTAAGTTAGAGACGATGGAGCCGTGTTCTAGCGTTAAAGACAGGATTGCGCATAGTATGATTCAAGATGCTGAGGATAAAGGCCTGATTACACCAGGGAAGACTGTCCTCGTCGAGATAACGAGCGGTAACACAGGCATTGCATTGGCAGGCATCGCAGCTGTGAAGGGCTATAGGCTTATTATAGTTATGCCAGCTTCGTATAGTCTTGAAAGACGAATTCTGCTTCTAGCTTTTGGAGCTGAGTTGCACATCACAGACCCTGCACTGGGGCTTGAAGGCCTTCTAAAGAAGGTTGGGGAGATAATGGAAGCCACTCCCAACAGCTATTTTCTGAAGCAATTTGATAATCCAGCAAACCCAAAGATTCATTATGAAACCACTGGGCCAGAGATATGGAAAGATTCAGGAGGAAAAGTCGATGTGTTGGTCGTGGGGATTGGAACCGGAGGAACAATAACTGGCACAGGGAATTTTCTTAAGGAACAGAATCCAGACATTAAGGTTTATGCAGTGGAACCAGCAGAGAGTGCAGTGCTAAGTGGGGAACAACCTGGCAAGCATCTAATTCAAGGCATTGGGGCTGGCTTCATCCCAGCTATTCTTGATCTCAAAGTCTTTGATGAAGTCTTTAAGGTGACAAGTGAGGAAGCCATTGAAACTGCAAGGCTTCTTGCACTAAAAGAAGGCCTCCTAGTGGGGATTTCATCTGGTGCAGCAGCAGCTGCTGCAATAAAGGTTGCAAAGAGACCAGAAAATGAAGGAAAACTCGTTGTTGTCATCTTCCCGAGCTTCGGTGAGCGATATCTCTCGACGACGCTTTTTGATTCCATCAGGCATCAAGCAGAAAACATGACTTATCTATGA
Protein sequence
MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAEDKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHITDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVVGIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLKVFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSFGERYLSTTLFDSIRHQAENMTYL
Homology
BLAST of CmaCh11G010020.1 vs. ExPASy Swiss-Prot
Match:
Q43317 (Cysteine synthase OS=Citrullus lanatus OX=3654 PE=1 SV=1)
HSP 1 Score: 479.6 bits (1233), Expect = 2.9e-134
Identity = 233/321 (72.59%), Postives = 276/321 (85.98%), Query Frame = 0
Query: 2 EEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAED 61
+ KS I KD+TELIGNTP+VYLN++ DGC AR+AAKLE MEPCSSVKDRI +SMI DAE+
Sbjct: 3 DAKSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAEN 62
Query: 62 KGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHIT 121
KGLITPG++VL+E TSGNTGI LA IAA KGYRLII MPAS SLERR +L AFGAEL +T
Sbjct: 63 KGLITPGESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELVLT 122
Query: 122 DPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVVG 181
DPA G++G ++K EI TPNSY L+QF+NPANPKIHYETTGPEIW+ SGGK+D LV G
Sbjct: 123 DPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALVSG 182
Query: 182 IGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLKV 241
IGTGGT+TG G +LKEQNP+IK+Y VEP ESA+LSG +PG H IQGIGAGFIP +LD+ +
Sbjct: 183 IGTGGTVTGAGKYLKEQNPNIKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLDVNL 242
Query: 242 FDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSFG 301
DEV +V+SEE+IETA+LLALKEGLLVGISSGAAAAAAI++AKRPEN GKL+V +FPSFG
Sbjct: 243 LDEVIQVSSEESIETAKLLALKEGLLVGISSGAAAAAAIRIAKRPENAGKLIVAVFPSFG 302
Query: 302 ERYLSTTLFDSIRHQAENMTY 323
ERYLST LF+S++ + ENM +
Sbjct: 303 ERYLSTVLFESVKRETENMVF 323
BLAST of CmaCh11G010020.1 vs. ExPASy Swiss-Prot
Match:
Q00834 (Cysteine synthase OS=Spinacia oleracea OX=3562 PE=1 SV=1)
HSP 1 Score: 470.7 bits (1210), Expect = 1.3e-131
Identity = 230/320 (71.88%), Postives = 273/320 (85.31%), Query Frame = 0
Query: 1 MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAE 60
+EEK+ I KD+TELIG TP+VYLN +ADGC AR+AAKLE MEPCSSVKDRI SMI DAE
Sbjct: 2 VEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAE 61
Query: 61 DKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHI 120
GLITPG++VL+E TSGNTGI LA IAA KGY+LII MPAS SLERR +L AFGAEL +
Sbjct: 62 KSGLITPGESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELIL 121
Query: 121 TDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVV 180
TDPA G++G ++K EI + TPNSY L+QF+NPANPK+HYETTGPEIWK +GGK+D+ V
Sbjct: 122 TDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFVS 181
Query: 181 GIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLK 240
GIGTGGTITG G +LKEQNPD+K+ +EP ESAVLSG +PG H IQG+GAGFIP +LD+
Sbjct: 182 GIGTGGTITGAGKYLKEQNPDVKLIGLEPVESAVLSGGKPGPHKIQGLGAGFIPGVLDVN 241
Query: 241 VFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSF 300
+ DEV +++SEE+IE A+LLALKEGLLVGISSGAAAAAAIKVAKRPEN GKL+V +FPSF
Sbjct: 242 IIDEVVQISSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVAVFPSF 301
Query: 301 GERYLSTTLFDSIRHQAENM 321
GERYLS+ LFDS+R +AE+M
Sbjct: 302 GERYLSSVLFDSVRKEAESM 321
BLAST of CmaCh11G010020.1 vs. ExPASy Swiss-Prot
Match:
O81154 (Cysteine synthase OS=Solanum tuberosum OX=4113 PE=2 SV=1)
HSP 1 Score: 468.0 bits (1203), Expect = 8.6e-131
Identity = 228/319 (71.47%), Postives = 273/319 (85.58%), Query Frame = 0
Query: 3 EKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAEDK 62
EK GI KD+TELIGNTP+VYLN + DGC AR+AAKLE+MEPCSSVKDRI +SMI DAE+K
Sbjct: 4 EKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEK 63
Query: 63 GLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHITD 122
GLI PG++VL+E TSGNTG+ LA +AA KGY+LII MP+S SLERRI+L F +EL +TD
Sbjct: 64 GLIKPGESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTD 123
Query: 123 PALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVVGI 182
PA G++G + K EI TPNSY L+QF+NPANPKIHYETTGPEIWK S GKVD L GI
Sbjct: 124 PAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALASGI 183
Query: 183 GTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLKVF 242
GTGGTITG+G +L+EQNP++K+Y VEP ESA+LSG +PG H IQGIGAGFIP +L++ +
Sbjct: 184 GTGGTITGSGKYLREQNPNVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLEVNLI 243
Query: 243 DEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSFGE 302
D+V +V+SEE+IE A+LLALKEGLLVGISSGAAAAAAIKVAKRPEN GKL+VVIFPSFGE
Sbjct: 244 DDVVQVSSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSFGE 303
Query: 303 RYLSTTLFDSIRHQAENMT 322
RYLS+ LF+++R +AENMT
Sbjct: 304 RYLSSVLFETVRREAENMT 322
BLAST of CmaCh11G010020.1 vs. ExPASy Swiss-Prot
Match:
Q9XEA8 (Cysteine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=RCS3 PE=2 SV=1)
HSP 1 Score: 465.7 bits (1197), Expect = 4.3e-130
Identity = 226/321 (70.40%), Postives = 272/321 (84.74%), Query Frame = 0
Query: 2 EEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAED 61
E I D+T LIGNTP+VYLNK+ DGC A+IAAKLE MEPCSSVKDRI +SMI DAE+
Sbjct: 3 ESGQSIASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEE 62
Query: 62 KGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHIT 121
KGLITPGK+VL+E TSGNTGI LA +AA KGY+LI+ MPAS S+ERRI+L AFGAEL +T
Sbjct: 63 KGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKAFGAELVLT 122
Query: 122 DPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVVG 181
DP LG++G ++K E+ PNSY L+QF+NPANPKIHYETTGPEIWK + GKVD+LV G
Sbjct: 123 DPLLGMKGAIQKADELAAKMPNSYILQQFENPANPKIHYETTGPEIWKATAGKVDILVSG 182
Query: 182 IGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLKV 241
IGTGGT+TGTG +LKEQNP+IK+Y VEP ESA+LSG +PG H IQGIGAGF+P +LD+ +
Sbjct: 183 IGTGGTVTGTGKYLKEQNPEIKIYGVEPTESAILSGGRPGPHKIQGIGAGFVPGVLDVNL 242
Query: 242 FDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSFG 301
DEV +V+S+EAI A+ LALKEGLLVGISSGAAA AAI+VA+RPEN+GKLVVV+FPSFG
Sbjct: 243 LDEVVQVSSDEAISMAKQLALKEGLLVGISSGAAAVAAIRVAQRPENKGKLVVVVFPSFG 302
Query: 302 ERYLSTTLFDSIRHQAENMTY 323
ERYLS+ LF+SI+ +AENM +
Sbjct: 303 ERYLSSVLFESIKREAENMVF 323
BLAST of CmaCh11G010020.1 vs. ExPASy Swiss-Prot
Match:
Q9SXS7 (Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 OS=Arabidopsis thaliana OX=3702 GN=CYSD2 PE=1 SV=1)
HSP 1 Score: 463.4 bits (1191), Expect = 2.1e-129
Identity = 228/320 (71.25%), Postives = 269/320 (84.06%), Query Frame = 0
Query: 1 MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAE 60
ME++ IK DITELIGNTPMVYLN + DGC ARIAAKLE MEPCSSVKDRIA+SMI+DAE
Sbjct: 1 MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60
Query: 61 DKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHI 120
DKGLITPGK+ L+E T+GNTGI LA + A +GY++I+VMP++ SLERRI+L A GAELH+
Sbjct: 61 DKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHL 120
Query: 121 TDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVV 180
+D +GL+G+L+K I+ TP Y +QF+NPANP+IHY TTGPEIW+DS GKVD+LV
Sbjct: 121 SDQRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180
Query: 181 GIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLK 240
G+GTGGT TG G FLKEQN DIKV VEP ES VLSG QPG HLIQGIG+G +P LDL
Sbjct: 181 GVGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLT 240
Query: 241 VFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSF 300
+ DE+ +V EEAIETA+LLALKEGLLVGISSGAAAAAA+KVAKRPEN GKL+VV+FPS
Sbjct: 241 IVDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSG 300
Query: 301 GERYLSTTLFDSIRHQAENM 321
GERYLST LFDSIR++AEN+
Sbjct: 301 GERYLSTKLFDSIRYEAENL 320
BLAST of CmaCh11G010020.1 vs. TAIR 10
Match:
AT5G28020.1 (cysteine synthase D2 )
HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-130
Identity = 228/320 (71.25%), Postives = 269/320 (84.06%), Query Frame = 0
Query: 1 MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAE 60
ME++ IK DITELIGNTPMVYLN + DGC ARIAAKLE MEPCSSVKDRIA+SMI+DAE
Sbjct: 1 MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60
Query: 61 DKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHI 120
DKGLITPGK+ L+E T+GNTGI LA + A +GY++I+VMP++ SLERRI+L A GAELH+
Sbjct: 61 DKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHL 120
Query: 121 TDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVV 180
+D +GL+G+L+K I+ TP Y +QF+NPANP+IHY TTGPEIW+DS GKVD+LV
Sbjct: 121 SDQRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180
Query: 181 GIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLK 240
G+GTGGT TG G FLKEQN DIKV VEP ES VLSG QPG HLIQGIG+G +P LDL
Sbjct: 181 GVGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLT 240
Query: 241 VFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSF 300
+ DE+ +V EEAIETA+LLALKEGLLVGISSGAAAAAA+KVAKRPEN GKL+VV+FPS
Sbjct: 241 IVDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSG 300
Query: 301 GERYLSTTLFDSIRHQAENM 321
GERYLST LFDSIR++AEN+
Sbjct: 301 GERYLSTKLFDSIRYEAENL 320
BLAST of CmaCh11G010020.1 vs. TAIR 10
Match:
AT5G28020.2 (cysteine synthase D2 )
HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-130
Identity = 228/320 (71.25%), Postives = 269/320 (84.06%), Query Frame = 0
Query: 1 MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAE 60
ME++ IK DITELIGNTPMVYLN + DGC ARIAAKLE MEPCSSVKDRIA+SMI+DAE
Sbjct: 1 MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60
Query: 61 DKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHI 120
DKGLITPGK+ L+E T+GNTGI LA + A +GY++I+VMP++ SLERRI+L A GAELH+
Sbjct: 61 DKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHL 120
Query: 121 TDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVV 180
+D +GL+G+L+K I+ TP Y +QF+NPANP+IHY TTGPEIW+DS GKVD+LV
Sbjct: 121 SDQRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180
Query: 181 GIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLK 240
G+GTGGT TG G FLKEQN DIKV VEP ES VLSG QPG HLIQGIG+G +P LDL
Sbjct: 181 GVGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLT 240
Query: 241 VFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSF 300
+ DE+ +V EEAIETA+LLALKEGLLVGISSGAAAAAA+KVAKRPEN GKL+VV+FPS
Sbjct: 241 IVDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSG 300
Query: 301 GERYLSTTLFDSIRHQAENM 321
GERYLST LFDSIR++AEN+
Sbjct: 301 GERYLSTKLFDSIRYEAENL 320
BLAST of CmaCh11G010020.1 vs. TAIR 10
Match:
AT5G28020.3 (cysteine synthase D2 )
HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-130
Identity = 228/320 (71.25%), Postives = 269/320 (84.06%), Query Frame = 0
Query: 1 MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAE 60
ME++ IK DITELIGNTPMVYLN + DGC ARIAAKLE MEPCSSVKDRIA+SMI+DAE
Sbjct: 1 MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60
Query: 61 DKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHI 120
DKGLITPGK+ L+E T+GNTGI LA + A +GY++I+VMP++ SLERRI+L A GAELH+
Sbjct: 61 DKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHL 120
Query: 121 TDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVV 180
+D +GL+G+L+K I+ TP Y +QF+NPANP+IHY TTGPEIW+DS GKVD+LV
Sbjct: 121 SDQRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180
Query: 181 GIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLK 240
G+GTGGT TG G FLKEQN DIKV VEP ES VLSG QPG HLIQGIG+G +P LDL
Sbjct: 181 GVGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLT 240
Query: 241 VFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSF 300
+ DE+ +V EEAIETA+LLALKEGLLVGISSGAAAAAA+KVAKRPEN GKL+VV+FPS
Sbjct: 241 IVDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSG 300
Query: 301 GERYLSTTLFDSIRHQAENM 321
GERYLST LFDSIR++AEN+
Sbjct: 301 GERYLSTKLFDSIRYEAENL 320
BLAST of CmaCh11G010020.1 vs. TAIR 10
Match:
AT5G28020.4 (cysteine synthase D2 )
HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-130
Identity = 228/320 (71.25%), Postives = 269/320 (84.06%), Query Frame = 0
Query: 1 MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAE 60
ME++ IK DITELIGNTPMVYLN + DGC ARIAAKLE MEPCSSVKDRIA+SMI+DAE
Sbjct: 1 MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60
Query: 61 DKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHI 120
DKGLITPGK+ L+E T+GNTGI LA + A +GY++I+VMP++ SLERRI+L A GAELH+
Sbjct: 61 DKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHL 120
Query: 121 TDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVV 180
+D +GL+G+L+K I+ TP Y +QF+NPANP+IHY TTGPEIW+DS GKVD+LV
Sbjct: 121 SDQRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180
Query: 181 GIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLK 240
G+GTGGT TG G FLKEQN DIKV VEP ES VLSG QPG HLIQGIG+G +P LDL
Sbjct: 181 GVGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLT 240
Query: 241 VFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSF 300
+ DE+ +V EEAIETA+LLALKEGLLVGISSGAAAAAA+KVAKRPEN GKL+VV+FPS
Sbjct: 241 IVDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSG 300
Query: 301 GERYLSTTLFDSIRHQAENM 321
GERYLST LFDSIR++AEN+
Sbjct: 301 GERYLSTKLFDSIRYEAENL 320
BLAST of CmaCh11G010020.1 vs. TAIR 10
Match:
AT5G28020.6 (cysteine synthase D2 )
HSP 1 Score: 463.4 bits (1191), Expect = 1.5e-130
Identity = 228/320 (71.25%), Postives = 269/320 (84.06%), Query Frame = 0
Query: 1 MEEKSGIKKDITELIGNTPMVYLNKMADGCFARIAAKLETMEPCSSVKDRIAHSMIQDAE 60
ME++ IK DITELIGNTPMVYLN + DGC ARIAAKLE MEPCSSVKDRIA+SMI+DAE
Sbjct: 1 MEDRCLIKNDITELIGNTPMVYLNNVVDGCVARIAAKLEMMEPCSSVKDRIAYSMIKDAE 60
Query: 61 DKGLITPGKTVLVEITSGNTGIALAGIAAVKGYRLIIVMPASYSLERRILLLAFGAELHI 120
DKGLITPGK+ L+E T+GNTGI LA + A +GY++I+VMP++ SLERRI+L A GAELH+
Sbjct: 61 DKGLITPGKSTLIEPTAGNTGIGLACMGAARGYKVILVMPSTMSLERRIILRALGAELHL 120
Query: 121 TDPALGLEGLLKKVGEIMEATPNSYFLKQFDNPANPKIHYETTGPEIWKDSGGKVDVLVV 180
+D +GL+G+L+K I+ TP Y +QF+NPANP+IHY TTGPEIW+DS GKVD+LV
Sbjct: 121 SDQRIGLKGMLEKTEAILSKTPGGYIPQQFENPANPEIHYRTTGPEIWRDSAGKVDILVA 180
Query: 181 GIGTGGTITGTGNFLKEQNPDIKVYAVEPAESAVLSGEQPGKHLIQGIGAGFIPAILDLK 240
G+GTGGT TG G FLKEQN DIKV VEP ES VLSG QPG HLIQGIG+G +P LDL
Sbjct: 181 GVGTGGTATGVGKFLKEQNKDIKVCVVEPVESPVLSGGQPGPHLIQGIGSGIVPFNLDLT 240
Query: 241 VFDEVFKVTSEEAIETARLLALKEGLLVGISSGAAAAAAIKVAKRPENEGKLVVVIFPSF 300
+ DE+ +V EEAIETA+LLALKEGLLVGISSGAAAAAA+KVAKRPEN GKL+VV+FPS
Sbjct: 241 IVDEIIQVAGEEAIETAKLLALKEGLLVGISSGAAAAAALKVAKRPENAGKLIVVVFPSG 300
Query: 301 GERYLSTTLFDSIRHQAENM 321
GERYLST LFDSIR++AEN+
Sbjct: 301 GERYLSTKLFDSIRYEAENL 320
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q43317 | 2.9e-134 | 72.59 | Cysteine synthase OS=Citrullus lanatus OX=3654 PE=1 SV=1 | [more] |
Q00834 | 1.3e-131 | 71.88 | Cysteine synthase OS=Spinacia oleracea OX=3562 PE=1 SV=1 | [more] |
O81154 | 8.6e-131 | 71.47 | Cysteine synthase OS=Solanum tuberosum OX=4113 PE=2 SV=1 | [more] |
Q9XEA8 | 4.3e-130 | 70.40 | Cysteine synthase OS=Oryza sativa subsp. japonica OX=39947 GN=RCS3 PE=2 SV=1 | [more] |
Q9SXS7 | 2.1e-129 | 71.25 | Bifunctional L-3-cyanoalanine synthase/cysteine synthase D2 OS=Arabidopsis thali... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh11G010020.1:exon:844 | CmaCh11G010020.1:exon:844 | exon |
CmaCh11G010020.1:exon:843 | CmaCh11G010020.1:exon:843 | exon |
CmaCh11G010020.1:exon:842 | CmaCh11G010020.1:exon:842 | exon |
CmaCh11G010020.1:exon:841 | CmaCh11G010020.1:exon:841 | exon |
CmaCh11G010020.1:exon:840 | CmaCh11G010020.1:exon:840 | exon |
CmaCh11G010020.1:exon:839 | CmaCh11G010020.1:exon:839 | exon |
CmaCh11G010020.1:exon:838 | CmaCh11G010020.1:exon:838 | exon |
CmaCh11G010020.1:exon:837 | CmaCh11G010020.1:exon:837 | exon |
CmaCh11G010020.1:exon:836 | CmaCh11G010020.1:exon:836 | exon |
CmaCh11G010020.1:exon:835 | CmaCh11G010020.1:exon:835 | exon |
CmaCh11G010020.1:exon:834 | CmaCh11G010020.1:exon:834 | exon |
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh11G010020.1:three_prime_utr | CmaCh11G010020.1:three_prime_utr | three_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_10 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_9 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_8 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_7 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_6 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_5 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_4 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_3 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds_2 | CDS |
CmaCh11G010020.1:cds | CmaCh11G010020.1:cds | CDS |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh11G010020.1:five_prime_utr | CmaCh11G010020.1:five_prime_utr_2 | five_prime_UTR |
CmaCh11G010020.1:five_prime_utr | CmaCh11G010020.1:five_prime_utr | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CmaCh11G010020.1 | CmaCh11G010020.1-protein | polypeptide |