CmaCh11G005380.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh11G005380.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr11: 2599375 .. 2601450 (-)
Sequence length282
RNA-Seq ExpressionCmaCh11G005380.1
SyntenyCmaCh11G005380.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGAAGCCCAGTCCATGACAGGAGAGACCAGAACAGACAGGATGAACAAAGAAAACCCCAAGTTCATTCTAAATCTAAAGCTCATCTTCTTAGACCATCCATCCCAAGCAACCATAAGAACCAGAAGGAGCACAGAGGAAGTCATGTAAGCCACGGAGAAAACCTTTTCGACATGTTTGGTGGGATAGAGGTAGCCAAAGTAATCAACAGCAGTGATGGAAGCATTCCATGGGAGCAAATTACCAACACCAAGCAAGAAATGGATTAGGTAGGCAATTTTGAAAGTATCTCTTGGTTCTAGTTGATCTCTCGTAATAATAGCCTTTTCAGCTTCCATTTTCATGTTCAAGCGTTCTTCTGAGTTCTGGTGTTGGGAATTTATGCATTGTCAAAACAGTAGCTTGGCATCCAGAAATGATGTGTTGATGAGATGGGCATATCCCTTTGAGAAAGAGTTGAAATTATTCAAAGCTTAAGGTAATAAGCCAGCCAGCAGCAGTGCCACTTCAAGATTGGTGGCTGTAATTTATAGACATGTTTGATCTTTTTCAATGTTGTTAACCATTAAAAACAGCTTCCCTCAGTCACCATGGAGAGGGATGGCTCTGTTTTAGGCTTTGAAAGCCTTTTATTGAAATAATTGACAGCTCAGTTTGTTTGGATCGCAGATGTGATTGATGGGTTCAACTTGGAACCATATGACTCACGAAAGTAACCAAAAAACTTGTGCTCCATGGATGGGCAATATTATTAGGCTTGCTGCTCCTTTATTCTACTGCTACTGCTACACATGGGGGGGCTGCATTCCTCATCAACCCCATCTCTAAACTTCAATTCCATTCCATAATTTCTGGGTTTAAGCTTTAAAGTTTTAAGGGTTCATTAAGTAATCATTCTATGAGCTTTTGCAGCCTACACGCAGAGCTAAAACTGGTTAGAGTAAACAGAGCTGACATGAACCGGAGGGTCCTATCAGCGTGGCCAAGATGACACATACAGATGATAAGCCATCCGCATGGGGAACTTGATTCTTCTTTTTCCCAGTCAGGGAATTTTCATATTGGAGAGGGTTAATTGCCCCCATCCATCCTTTTCTTTTTCTTCTTCTTCCTGTCATTTCGTACTATCTTCACTTGGTTTTTATATTCCTCTCTTTTTTTTTTACCTTGATTAATCTGAACAAGACTTTATTCATGGAGGTGAGTTGTTTGCATTTGTATAGGGAATTGTATATATTACTTTAAATATATATTACTCACCAGAAAATTCCTCAGCGTATGATACTACTTAATTGTGAGATCTCAACGAAACATTTCTTATAAGGGTATGAAATTTTTTTCCTAATAGATCGTGAGACTGACGGCGATATGTAACAGGCCAAAGCAGACAATATCGGCTTGCAGTGAGCTTGAGCTATTACAAATAGTATTATAGTTGGATACTGGGCGGTGTGCCAACGAGGATATGGTCTCTCAACAGGGGCGGTTAGAGAGGGGAGCGAAACATTTCTATACATAATGGATCAAAGGTGACCATTTGTTACATTAATTCTCATTACATACAATGAATTGTAGACTAAATGAACGAAACAAGTGAATTCGATTGTACATTACACAAGTTGGATATCATTTAACAACTCATTTAACTAGTTTGTATTCATATTTGATTATATGAGTTCCATAAGCTAATATGGAGATTGAAAACTACAAGACGGCAATGAAGGAATAAAAGTGGAAGAAAATTAGAATCTTTGTACCTAGTTTAGTTACAAGACATATGTAGTCAATTTTTTCAAAATGAAAGCGTAAGAGATGGTGATGCATTATTATTGTTTGGTGTACATCAAATCTGAGTAGAATATATAAAAGGAATTGAAGGCAGAAAAAAAAGGTACCCATAGTTTGAAAGTCTGAAAAGCAATCCACGCCACTCCAAAACCACTCCTTTAGAAGCTATTAACATAACCCTTTTGTTTTTGTAGTCTTTTTCCATAGATGTGCAAACCCAATATTTTTGACAGCAAATGCGATTCCTTGTTCCTCAAAATTGCGCATATATTGTACTCTTATTAA

mRNA sequence

ATGTTTGAAGCCCAGTCCATGACAGGAGAGACCAGAACAGACAGGATGAACAAAGAAAACCCCAAGTTCATTCTAAATCTAAAGCTCATCTTCTTAGACCATCCATCCCAAGCAACCATAAGAACCAGAAGGAGCACAGAGGAAGTCATCCTACACGCAGAGCTAAAACTGGTTAGAGTAAACAGAGCTGACATGAACCGGAGGATGTGCAAACCCAATATTTTTGACAGCAAATGCGATTCCTTGTTCCTCAAAATTGCGCATATATTGTACTCTTATTAA

Coding sequence (CDS)

ATGTTTGAAGCCCAGTCCATGACAGGAGAGACCAGAACAGACAGGATGAACAAAGAAAACCCCAAGTTCATTCTAAATCTAAAGCTCATCTTCTTAGACCATCCATCCCAAGCAACCATAAGAACCAGAAGGAGCACAGAGGAAGTCATCCTACACGCAGAGCTAAAACTGGTTAGAGTAAACAGAGCTGACATGAACCGGAGGATGTGCAAACCCAATATTTTTGACAGCAAATGCGATTCCTTGTTCCTCAAAATTGCGCATATATTGTACTCTTATTAA

Protein sequence

MFEAQSMTGETRTDRMNKENPKFILNLKLIFLDHPSQATIRTRRSTEEVILHAELKLVRVNRADMNRRMCKPNIFDSKCDSLFLKIAHILYSY
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh11G005380.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh11G005380.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh11G005380CmaCh11G005380gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh11G005380.1:exon:426CmaCh11G005380.1:exon:426exon
CmaCh11G005380.1:exon:425CmaCh11G005380.1:exon:425exon
CmaCh11G005380.1:exon:424CmaCh11G005380.1:exon:424exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh11G005380.1:cdsCmaCh11G005380.1:cds_3CDS
CmaCh11G005380.1:cdsCmaCh11G005380.1:cds_2CDS
CmaCh11G005380.1:cdsCmaCh11G005380.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh11G005380.1CmaCh11G005380.1-proteinpolypeptide