CmaCh11G004330.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G004330.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	UDP-glucuronate 4-epimerase 4
Location	Cma_Chr11: 2116937 .. 2119476 (+)
Sequence length	1392
RNA-Seq Expression	CmaCh11G004330.1
Synteny	CmaCh11G004330.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGACATTGGATGAGGAGCTGTTTCCCTCCACCCCTGGTAAATTCAAAATCGAACAGAGAAGCTACGGAATCAACCGCCAGTTCTACCGCTTTTTCGCTTCCACCAGCACCATGTTCTTATGGGCTCTTTTCCTAATCGCGCTCACCGTCTCCTACCTCAGCTTCCAGAGCTTCGTCCATTCCGGTACCCGCCATATCTCCGCCTCATGGGGCGGCCGCCAATGGGAGAAACAAGTCCGCACCTCCGCCGAGATCCACCGCTCCGGCGGTATGTCTGTACTCGTCACTGGAGCTTCCGGTTTCGTCGGCACCCACGTTTCTTTAGCGCTCAAACGACGTGGAGACGGCGTCGTTGGGCTTGACAATTTTAATAATTACTACGACCCTTCGCTCAAAAAGGCTCGCAAGGCGCTTGTTAATCGTCACGGTGTGTTCGTCGTTGAGGGTGATGTTAACGACGCCCGTTTGCTCGATAAGCTTTTCGACATTGTTGCTTTCACGCACGTGATGCATTTAGCGGCCCAAGCTGGCGTCAGATACGCAATGGAGAATCCGCATTCCTATGTGCACAGTAACATTGCAGGCCTGGTCACGCTTCTCGAAGCTTGTAAATCCGCAGATCCCCAACCGGCCATTGTTTGGGCCTCTTCCAGCTCGGTCTACGGCCTGAACGAGAAGGTCCCGTTCTCCGAATTGGACCGGACCGACCAACCGGCGAGTCTCTACGCGGCAACGAAAAAAGCCGGTGAGGAAATTACCCACACTTACAATCATATCTACGGCTTGTCCATCACCGGGTTGAGATTCTTCACCGTGTACGGTCCATGGGGTAGACCCGACATGGCGTATTTTATGTTTACTAGGAATATTCTTCAGGGGAAACCGATTACGGTTTACCGTGGGAAGAATAAGGAGGATTTGGCCAGGGATTTTACCTACATTGACGATATTGTGAAGGGGTGTTTGGGTTCGCTCGACACATCTGGTAAAAGCACCGGATCGGGCGGGAAAAAGAGGGGACAGGCGCCGTATCGGATCTTCAATTTGGGGAATACGTCGCCAGTGACGGTGCCGGCGCTTGTGAGCATTCTGGAAGAGCATTTGAAGACGAAGGCGAAGAAGAAGATAGTGGACATGCCTGGAAATGGCGACGTTCCGTTCACCCACGCGAATATAAGTTCTGCCCAGGTGGAGTTCGGGTATAAACCAAGAACCGATTTACAATCCGGGCTGAAGAAGTTCGTTCGATGGTATTTGTCTTACTATGGGTACGATCAGGGGAGAACGGCAAATTAAGGGACGTCGTTTTGAATGATAAGGCGGGGGAAAGAGTGGAAGTGAAATGGAGGGGATGTCTTATATGTTGTATGGTAACCATTGTGTGCAAAGCGAAGTTCGAATACATTTAGGTTCTGGACGTGTGATCAAAAGAGAGAAGCCATCTTCATCTTCATCTTCATCTTCATCCTCATTTCATTATATTGTTTTCAAAACCAGGAGCACAATAACTATAAATGAAATTGTTCATGCTTAAGCTTCCTATTGGGTGATTCTATCTTTTTAAGCTTAGTCTTTAAAAAGAAATTTGAAATAAACAACCATAACAACATCTGAACATGAACTACTATAAGTTTCGAATCGTTGGATTTCTTCTGCAGGGCTGTGGCCAATCGACCCCCATGGCCTCTTGTCGCAAGTTTCGTACTTCACTGTTTCTTTCAACCAACTTTCGTTCTGAAGGAAGCTCCACAGGGTATGTATTCTTTCTTTCAACTATCATACACTTCTCCCTTAATCTTTAGCCATTTCGTTTGAGAATTATCTGTTCTTTTGGGTTTAGCAGCAGCAGAGGTTTTAGCATTTGGTTAATGGGGGTTGTCTGTGTGGATTTCCATTTCATTGCTTACAGTTCATTCGGTTCTTTCAGCTCACATACCCTGAATCTTGCATGCCCACTTTTCCCATTAGAGGCTTTTAGTATGATAAACTCAAGGGTTGCTGCCTCATGAGTTGGGTTTCTTTTGGTTTCATTGAGCCTGATGGGCACTACTTTGGGGTCGTCGTAAGGTCGGTATTGATACAAAGTTGTTGACCCTTCTAAGAGAGATTCCGGATACATGCCTTGGGGATATTATTCATGTTGCTGCCAATGTATTATTGCCTTTTGGAGGGAGGCAAGATTGATTTCTTTGCCATTCTGTGTACTGTTTTACATTGATATCTATTCTCAAGTGTTGGAGATAGTCACTAAATTGATCTCCATTATTGAACCAAACAAAGCTTCGGTTTCAAATATCAACTTGAACATAATTGCAGACGTATGCCTTCATGCTGGCCACTAAGGTCTTTTCAGAAACCCATAGCTGGAAAGGCTACCTCAAAAAAAACATGCTCAATACAACTTTAATGCAGTGTGTATAGCTACAGTGGATCTGCAACTACTGAACTTTATCGATGTCTTTTCTTTCTTTTGTGATTTTTATAGTGGCAGTGACATCTACCCCAAATTTCCTTCTCCATATCCATCCTTGCTTTGA

mRNA sequence

ATGCCGACATTGGATGAGGAGCTGTTTCCCTCCACCCCTGGTAAATTCAAAATCGAACAGAGAAGCTACGGAATCAACCGCCAGTTCTACCGCTTTTTCGCTTCCACCAGCACCATGTTCTTATGGGCTCTTTTCCTAATCGCGCTCACCGTCTCCTACCTCAGCTTCCAGAGCTTCGTCCATTCCGGTACCCGCCATATCTCCGCCTCATGGGGCGGCCGCCAATGGGAGAAACAAGTCCGCACCTCCGCCGAGATCCACCGCTCCGGCGGTATGTCTGTACTCGTCACTGGAGCTTCCGGTTTCGTCGGCACCCACGTTTCTTTAGCGCTCAAACGACGTGGAGACGGCGTCGTTGGGCTTGACAATTTTAATAATTACTACGACCCTTCGCTCAAAAAGGCTCGCAAGGCGCTTGTTAATCGTCACGGTGTGTTCGTCGTTGAGGGTGATGTTAACGACGCCCGTTTGCTCGATAAGCTTTTCGACATTGTTGCTTTCACGCACGTGATGCATTTAGCGGCCCAAGCTGGCGTCAGATACGCAATGGAGAATCCGCATTCCTATGTGCACAGTAACATTGCAGGCCTGGTCACGCTTCTCGAAGCTTGTAAATCCGCAGATCCCCAACCGGCCATTGTTTGGGCCTCTTCCAGCTCGGTCTACGGCCTGAACGAGAAGGTCCCGTTCTCCGAATTGGACCGGACCGACCAACCGGCGAGTCTCTACGCGGCAACGAAAAAAGCCGGTGAGGAAATTACCCACACTTACAATCATATCTACGGCTTGTCCATCACCGGGTTGAGATTCTTCACCGTGTACGGTCCATGGGGTAGACCCGACATGGCGTATTTTATGTTTACTAGGAATATTCTTCAGGGGAAACCGATTACGGTTTACCGTGGGAAGAATAAGGAGGATTTGGCCAGGGATTTTACCTACATTGACGATATTGTGAAGGGGTGTTTGGGTTCGCTCGACACATCTGGTAAAAGCACCGGATCGGGCGGGAAAAAGAGGGGACAGGCGCCGTATCGGATCTTCAATTTGGGGAATACGTCGCCAGTGACGGTGCCGGCGCTTGTGAGCATTCTGGAAGAGCATTTGAAGACGAAGGCGAAGAAGAAGATAGTGGACATGCCTGGAAATGGCGACGTTCCGTTCACCCACGCGAATATAAGTTCTGCCCAGGTGGAGTTCGGGTATAAACCAAGAACCGATTTACAATCCGGGCTGAAGAAGTTCGGCTGTGGCCAATCGACCCCCATGGCCTCTTGTCGCAAGTTTCGTACTTCACTGTTTCTTTCAACCAACTTTCGTTCTGAAGGAAGCTCCACAGGTGGCAGTGACATCTACCCCAAATTTCCTTCTCCATATCCATCCTTGCTTTGA

Coding sequence (CDS)

ATGCCGACATTGGATGAGGAGCTGTTTCCCTCCACCCCTGGTAAATTCAAAATCGAACAGAGAAGCTACGGAATCAACCGCCAGTTCTACCGCTTTTTCGCTTCCACCAGCACCATGTTCTTATGGGCTCTTTTCCTAATCGCGCTCACCGTCTCCTACCTCAGCTTCCAGAGCTTCGTCCATTCCGGTACCCGCCATATCTCCGCCTCATGGGGCGGCCGCCAATGGGAGAAACAAGTCCGCACCTCCGCCGAGATCCACCGCTCCGGCGGTATGTCTGTACTCGTCACTGGAGCTTCCGGTTTCGTCGGCACCCACGTTTCTTTAGCGCTCAAACGACGTGGAGACGGCGTCGTTGGGCTTGACAATTTTAATAATTACTACGACCCTTCGCTCAAAAAGGCTCGCAAGGCGCTTGTTAATCGTCACGGTGTGTTCGTCGTTGAGGGTGATGTTAACGACGCCCGTTTGCTCGATAAGCTTTTCGACATTGTTGCTTTCACGCACGTGATGCATTTAGCGGCCCAAGCTGGCGTCAGATACGCAATGGAGAATCCGCATTCCTATGTGCACAGTAACATTGCAGGCCTGGTCACGCTTCTCGAAGCTTGTAAATCCGCAGATCCCCAACCGGCCATTGTTTGGGCCTCTTCCAGCTCGGTCTACGGCCTGAACGAGAAGGTCCCGTTCTCCGAATTGGACCGGACCGACCAACCGGCGAGTCTCTACGCGGCAACGAAAAAAGCCGGTGAGGAAATTACCCACACTTACAATCATATCTACGGCTTGTCCATCACCGGGTTGAGATTCTTCACCGTGTACGGTCCATGGGGTAGACCCGACATGGCGTATTTTATGTTTACTAGGAATATTCTTCAGGGGAAACCGATTACGGTTTACCGTGGGAAGAATAAGGAGGATTTGGCCAGGGATTTTACCTACATTGACGATATTGTGAAGGGGTGTTTGGGTTCGCTCGACACATCTGGTAAAAGCACCGGATCGGGCGGGAAAAAGAGGGGACAGGCGCCGTATCGGATCTTCAATTTGGGGAATACGTCGCCAGTGACGGTGCCGGCGCTTGTGAGCATTCTGGAAGAGCATTTGAAGACGAAGGCGAAGAAGAAGATAGTGGACATGCCTGGAAATGGCGACGTTCCGTTCACCCACGCGAATATAAGTTCTGCCCAGGTGGAGTTCGGGTATAAACCAAGAACCGATTTACAATCCGGGCTGAAGAAGTTCGGCTGTGGCCAATCGACCCCCATGGCCTCTTGTCGCAAGTTTCGTACTTCACTGTTTCTTTCAACCAACTTTCGTTCTGAAGGAAGCTCCACAGGTGGCAGTGACATCTACCCCAAATTTCCTTCTCCATATCCATCCTTGCTTTGA

Protein sequence

MPTLDEELFPSTPGKFKIEQRSYGINRQFYRFFASTSTMFLWALFLIALTVSYLSFQSFVHSGTRHISASWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALKRRGDGVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMHLAAQAGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSELDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNILQGKPITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGNTSPVTVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGLKKFGCGQSTPMASCRKFRTSLFLSTNFRSEGSSTGGSDIYPKFPSPYPSLL

Homology

[Close]

BLAST of CmaCh11G004330.1 vs. ExPASy Swiss-Prot
Match: Q9M0B6 (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=GAE1 PE=1 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 1.6e-207
Identity = 349/415 (84.10%), Postives = 388/415 (93.49%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRSYGINRQFYRFFASTSTMFLWALFLIALTVSYLSFQSFV 60
           MP++++ELFPSTPGKFKI++     NRQ +R FASTSTMFLWALFLIALT SYLSFQSFV
Sbjct: 1   MPSIEDELFPSTPGKFKIDRS----NRQLHRCFASTSTMFLWALFLIALTASYLSFQSFV 60

Query: 61  HSGTRHISASWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALKRRGDGVVG 120
            SG+R+++ASWGG QWEKQVRTSA+IHRSGG+SVLVTGA+GFVG+HVSLAL++RGDGVVG
Sbjct: 61  DSGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVG 120

Query: 121 LDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMHLAAQAGVR 180
           LDNFNNYYDPSLK+AR++L++  G+FVVEGD+NDA+LL KLFD+VAFTHVMHLAAQAGVR
Sbjct: 121 LDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVR 180

Query: 181 YAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSELDRTDQPA 240
           YA+ENP SYVHSNIAGLV LLE CK+A+PQPAIVWASSSSVYGLNEKVPFSE DRTDQPA
Sbjct: 181 YALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPA 240

Query: 241 SLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNILQGKPITVY 300
           SLYAATKKAGEEITHTYNHIYGL+ITGLRFFTVYGPWGRPDMAYF FTRNILQGKPIT+Y
Sbjct: 241 SLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIY 300

Query: 301 RGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGNTSPVTVPA 360
           RGKN+ DLARDFTYIDDIVKGCLGSLD+SGKSTGSGGKKRG APYRIFNLGNTSPVTVP 
Sbjct: 301 RGKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPI 360

Query: 361 LVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGLKKF 416
           LV ILE+HLK KAK+  V+MPGNGDVPFTHANISSA+ EFGYKP TDL++GLKKF
Sbjct: 361 LVDILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKF 411

[Close]

BLAST of CmaCh11G004330.1 vs. ExPASy Swiss-Prot
Match: Q9LPC1 (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=GAE2 PE=2 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 9.4e-163
Identity = 294/419 (70.17%), Postives = 339/419 (80.91%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRS-YGINRQFYRFFASTSTMFLWAL--FLIALTVSYLSFQ 60
           M  LD+   PSTPGKFK+  +S + ++R   R+ +S + +  W+L  F +     Y S  
Sbjct: 1   MSHLDD--IPSTPGKFKMMDKSPFFLHRT--RWQSSVAKLAFWSLVFFGLLFIFFYRSPI 60

Query: 61  SFVHSGTRHI-SASWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALKRRGD 120
           S   S  R + + SWGG  WEK+VR+SA +    G+SVLVTGA+GFVGTHVS ALKRRGD
Sbjct: 61  SNPDSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGD 120

Query: 121 GVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMHLAAQ 180
           GV+GLDNFN+YYD SLK++R+AL+ R GVF+VEGD+ND  LL KLF++V FTHVMHLAAQ
Sbjct: 121 GVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQ 180

Query: 181 AGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSELDRT 240
           AGVRYAMENP SYVHSNIAG V LLE CKSA+PQPAIVWASSSSVYGLN KVPFSE DRT
Sbjct: 181 AGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRT 240

Query: 241 DQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNILQGKP 300
           DQPASLYAATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK 
Sbjct: 241 DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKA 300

Query: 301 ITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGNTSPV 360
           I+++ G N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSGGKKRG A  R+FNLGNTSPV
Sbjct: 301 ISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPV 360

Query: 361 TVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGLKKF 416
            V  LVSILE  LK KAK+ ++ +P NGDVPFTHANISSAQ EFGYKP TDLQ+GLKKF
Sbjct: 361 PVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKF 415

[Close]

BLAST of CmaCh11G004330.1 vs. ExPASy Swiss-Prot
Match: O81312 (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana OX=3702 GN=GAE3 PE=2 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 8.8e-161
Identity = 294/423 (69.50%), Postives = 333/423 (78.72%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRSYGINRQFY--RFFASTSTMFLWALFLIALTVSYLSFQS 60
           M  LD+   PSTPGKFK           F+  R+ +S + +  W+L  + L   +  ++S
Sbjct: 4   MSHLDD--IPSTPGKFK---------PYFHRTRWQSSVAKLAFWSLVFVGLIFIFF-YRS 63

Query: 61  FVHSGTRHISA------SWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALK 120
            V S     S       SWGG  WEK+VR+SA +    G SVLVTGA+GFVGTHVS ALK
Sbjct: 64  PVSSNPADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALK 123

Query: 121 RRGDGVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMH 180
           RRGDGV+GLDNFN+YYDPSLK+AR+AL+ R GVFVVEGD+NDA LL KLF++V FTHVMH
Sbjct: 124 RRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMH 183

Query: 181 LAAQAGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSE 240
           LAAQAGVRYAMENP SYVHSNIAG V LLE CKSA+PQPAIVWASSSSVYGLN KVPFSE
Sbjct: 184 LAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSE 243

Query: 241 LDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNIL 300
            DRTDQPASLYAATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL
Sbjct: 244 KDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDIL 303

Query: 301 QGKPITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGN 360
           +GK I+++ G N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSGGKKRG A  R+FNLGN
Sbjct: 304 KGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGN 363

Query: 361 TSPVTVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGL 416
           TSPV V  LV+ILE  LK KAK+ I+ +P NGDV FTHANISSAQ E GYKP TDLQ+GL
Sbjct: 364 TSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGL 414

[Close]

BLAST of CmaCh11G004330.1 vs. ExPASy Swiss-Prot
Match: Q9STI6 (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana OX=3702 GN=GAE5 PE=2 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 3.1e-158
Identity = 287/423 (67.85%), Postives = 332/423 (78.49%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQ-RSYGINRQFYRFFASTSTMFLWALFLIALTVSYLSFQSF 60
           M  LD+   PSTPGK+K ++   YGI    +  +   S + LWA   +AL + YL     
Sbjct: 1   MSHLDD--LPSTPGKYKTDKVPPYGI--LHHHRYLRLSKLTLWASLFLALFLFYLVLSPP 60

Query: 61  VHSGTRHI-------SASWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALK 120
                R++       +A +GG  WEKQVR SA     GG++VLVTGASGFVGTHVS+AL+
Sbjct: 61  PSPSRRNLNDSSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALR 120

Query: 121 RRGDGVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMH 180
           RRGDGV+GLDNFN YYDP LK+AR+ L+ R GVFVVEGD+NDA LL KLFD+V FTHVMH
Sbjct: 121 RRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMH 180

Query: 181 LAAQAGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSE 240
           LAAQAGVRYAM+NP SYV+SNIAG V LLE  KSA+PQPAIVWASSSSVYGLN KVPFSE
Sbjct: 181 LAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSE 240

Query: 241 LDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNIL 300
            DRTDQPASLYAATKKAGE I HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL
Sbjct: 241 KDRTDQPASLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDIL 300

Query: 301 QGKPITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGN 360
           +GK ITV+   +K  +ARDFTYIDDIVKGCLG+LDT+ KSTGSGGKK+G A +RI+NLGN
Sbjct: 301 KGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGN 360

Query: 361 TSPVTVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGL 416
           TSPV V  LV+ILE+ LK KAKKKI+ +P NGDV FTHANI+ AQ E GYKP  DL++GL
Sbjct: 361 TSPVPVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGL 419

[Close]

BLAST of CmaCh11G004330.1 vs. ExPASy Swiss-Prot
Match: O22141 (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana OX=3702 GN=GAE4 PE=1 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 5.3e-158
Identity = 287/425 (67.53%), Postives = 339/425 (79.76%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRSYGINRQFYRFFASTSTMFLWALFLIAL-TVSYLSFQSF 60
           M  LD+   PS+PGKFK+E+ SY ++R   RF +S +    ++ FL+ L ++ +L     
Sbjct: 1   MSRLDD--IPSSPGKFKMEKSSY-LHR--LRFQSSLTKFAFFSFFLLCLISLLFLRSPPS 60

Query: 61  VHSGT------RHI-SASWGGRQWEKQVRTSAEIHRS--GGMSVLVTGASGFVGTHVSLA 120
           ++  +      R + + ++GG  WEK++R+SA I  S   G++VLVTGA+GFVGTHVS A
Sbjct: 61  INPSSPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAA 120

Query: 121 LKRRGDGVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHV 180
           LKRRGDGV+GLDNFN+YYDPSLK+AR+AL+ R G+F+VEGD+ND  LL KLF IV+FTHV
Sbjct: 121 LKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHV 180

Query: 181 MHLAAQAGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPF 240
           MHLAAQAGVRYAMENP SYVHSNIAG V LLE CKS +PQPAIVWASSSSVYGLN KVPF
Sbjct: 181 MHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPF 240

Query: 241 SELDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRN 300
           SE D+TDQPASLYAATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++
Sbjct: 241 SEKDKTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKD 300

Query: 301 ILQGKPITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNL 360
           IL+GK I+++   N   +ARDFTYIDDIVKGCL +LDT+ KSTGSGGKKRG A  R+FNL
Sbjct: 301 ILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNL 360

Query: 361 GNTSPVTVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQS 416
           GNTSPV V  LV ILE  LK KAKK ++ MP NGDVPFTHANIS AQ E GYKP TDLQ+
Sbjct: 361 GNTSPVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQT 420

[Close]

BLAST of CmaCh11G004330.1 vs. TAIR 10
Match: AT4G30440.1 (UDP-D-glucuronate 4-epimerase 1 )

HSP 1 Score: 723.4 bits (1866), Expect = 1.2e-208
Identity = 349/415 (84.10%), Postives = 388/415 (93.49%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRSYGINRQFYRFFASTSTMFLWALFLIALTVSYLSFQSFV 60
           MP++++ELFPSTPGKFKI++     NRQ +R FASTSTMFLWALFLIALT SYLSFQSFV
Sbjct: 1   MPSIEDELFPSTPGKFKIDRS----NRQLHRCFASTSTMFLWALFLIALTASYLSFQSFV 60

Query: 61  HSGTRHISASWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALKRRGDGVVG 120
            SG+R+++ASWGG QWEKQVRTSA+IHRSGG+SVLVTGA+GFVG+HVSLAL++RGDGVVG
Sbjct: 61  DSGSRYLTASWGGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVG 120

Query: 121 LDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMHLAAQAGVR 180
           LDNFNNYYDPSLK+AR++L++  G+FVVEGD+NDA+LL KLFD+VAFTHVMHLAAQAGVR
Sbjct: 121 LDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVR 180

Query: 181 YAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSELDRTDQPA 240
           YA+ENP SYVHSNIAGLV LLE CK+A+PQPAIVWASSSSVYGLNEKVPFSE DRTDQPA
Sbjct: 181 YALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPA 240

Query: 241 SLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNILQGKPITVY 300
           SLYAATKKAGEEITHTYNHIYGL+ITGLRFFTVYGPWGRPDMAYF FTRNILQGKPIT+Y
Sbjct: 241 SLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIY 300

Query: 301 RGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGNTSPVTVPA 360
           RGKN+ DLARDFTYIDDIVKGCLGSLD+SGKSTGSGGKKRG APYRIFNLGNTSPVTVP 
Sbjct: 301 RGKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPI 360

Query: 361 LVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGLKKF 416
           LV ILE+HLK KAK+  V+MPGNGDVPFTHANISSA+ EFGYKP TDL++GLKKF
Sbjct: 361 LVDILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKF 411

[Close]

BLAST of CmaCh11G004330.1 vs. TAIR 10
Match: AT1G02000.1 (UDP-D-glucuronate 4-epimerase 2 )

HSP 1 Score: 574.7 bits (1480), Expect = 6.7e-164
Identity = 294/419 (70.17%), Postives = 339/419 (80.91%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRS-YGINRQFYRFFASTSTMFLWAL--FLIALTVSYLSFQ 60
           M  LD+   PSTPGKFK+  +S + ++R   R+ +S + +  W+L  F +     Y S  
Sbjct: 1   MSHLDD--IPSTPGKFKMMDKSPFFLHRT--RWQSSVAKLAFWSLVFFGLLFIFFYRSPI 60

Query: 61  SFVHSGTRHI-SASWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALKRRGD 120
           S   S  R + + SWGG  WEK+VR+SA +    G+SVLVTGA+GFVGTHVS ALKRRGD
Sbjct: 61  SNPDSSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGD 120

Query: 121 GVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMHLAAQ 180
           GV+GLDNFN+YYD SLK++R+AL+ R GVF+VEGD+ND  LL KLF++V FTHVMHLAAQ
Sbjct: 121 GVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQ 180

Query: 181 AGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSELDRT 240
           AGVRYAMENP SYVHSNIAG V LLE CKSA+PQPAIVWASSSSVYGLN KVPFSE DRT
Sbjct: 181 AGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRT 240

Query: 241 DQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNILQGKP 300
           DQPASLYAATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL+GK 
Sbjct: 241 DQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKA 300

Query: 301 ITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGNTSPV 360
           I+++ G N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSGGKKRG A  R+FNLGNTSPV
Sbjct: 301 ISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPV 360

Query: 361 TVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGLKKF 416
            V  LVSILE  LK KAK+ ++ +P NGDVPFTHANISSAQ EFGYKP TDLQ+GLKKF
Sbjct: 361 PVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKF 415

[Close]

BLAST of CmaCh11G004330.1 vs. TAIR 10
Match: AT4G00110.1 (UDP-D-glucuronate 4-epimerase 3 )

HSP 1 Score: 568.2 bits (1463), Expect = 6.2e-162
Identity = 294/423 (69.50%), Postives = 333/423 (78.72%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRSYGINRQFY--RFFASTSTMFLWALFLIALTVSYLSFQS 60
           M  LD+   PSTPGKFK           F+  R+ +S + +  W+L  + L   +  ++S
Sbjct: 4   MSHLDD--IPSTPGKFK---------PYFHRTRWQSSVAKLAFWSLVFVGLIFIFF-YRS 63

Query: 61  FVHSGTRHISA------SWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALK 120
            V S     S       SWGG  WEK+VR+SA +    G SVLVTGA+GFVGTHVS ALK
Sbjct: 64  PVSSNPADPSRRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALK 123

Query: 121 RRGDGVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMH 180
           RRGDGV+GLDNFN+YYDPSLK+AR+AL+ R GVFVVEGD+NDA LL KLF++V FTHVMH
Sbjct: 124 RRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMH 183

Query: 181 LAAQAGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSE 240
           LAAQAGVRYAMENP SYVHSNIAG V LLE CKSA+PQPAIVWASSSSVYGLN KVPFSE
Sbjct: 184 LAAQAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSE 243

Query: 241 LDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNIL 300
            DRTDQPASLYAATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FTR+IL
Sbjct: 244 KDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDIL 303

Query: 301 QGKPITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGN 360
           +GK I+++ G N   +ARDFTYIDDIVKGCLG+LDT+ KSTGSGGKKRG A  R+FNLGN
Sbjct: 304 KGKAISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGN 363

Query: 361 TSPVTVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGL 416
           TSPV V  LV+ILE  LK KAK+ I+ +P NGDV FTHANISSAQ E GYKP TDLQ+GL
Sbjct: 364 TSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGL 414

[Close]

BLAST of CmaCh11G004330.1 vs. TAIR 10
Match: AT4G12250.1 (UDP-D-glucuronate 4-epimerase 5 )

HSP 1 Score: 559.7 bits (1441), Expect = 2.2e-159
Identity = 287/423 (67.85%), Postives = 332/423 (78.49%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQ-RSYGINRQFYRFFASTSTMFLWALFLIALTVSYLSFQSF 60
           M  LD+   PSTPGK+K ++   YGI    +  +   S + LWA   +AL + YL     
Sbjct: 1   MSHLDD--LPSTPGKYKTDKVPPYGI--LHHHRYLRLSKLTLWASLFLALFLFYLVLSPP 60

Query: 61  VHSGTRHI-------SASWGGRQWEKQVRTSAEIHRSGGMSVLVTGASGFVGTHVSLALK 120
                R++       +A +GG  WEKQVR SA     GG++VLVTGASGFVGTHVS+AL+
Sbjct: 61  PSPSRRNLNDSSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALR 120

Query: 121 RRGDGVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHVMH 180
           RRGDGV+GLDNFN YYDP LK+AR+ L+ R GVFVVEGD+NDA LL KLFD+V FTHVMH
Sbjct: 121 RRGDGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMH 180

Query: 181 LAAQAGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPFSE 240
           LAAQAGVRYAM+NP SYV+SNIAG V LLE  KSA+PQPAIVWASSSSVYGLN KVPFSE
Sbjct: 181 LAAQAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSE 240

Query: 241 LDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRNIL 300
            DRTDQPASLYAATKKAGE I HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++IL
Sbjct: 241 KDRTDQPASLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDIL 300

Query: 301 QGKPITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNLGN 360
           +GK ITV+   +K  +ARDFTYIDDIVKGCLG+LDT+ KSTGSGGKK+G A +RI+NLGN
Sbjct: 301 KGKTITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGN 360

Query: 361 TSPVTVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQSGL 416
           TSPV V  LV+ILE+ LK KAKKKI+ +P NGDV FTHANI+ AQ E GYKP  DL++GL
Sbjct: 361 TSPVPVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGL 419

[Close]

BLAST of CmaCh11G004330.1 vs. TAIR 10
Match: AT2G45310.1 (UDP-D-glucuronate 4-epimerase 4 )

HSP 1 Score: 558.9 bits (1439), Expect = 3.8e-159
Identity = 287/425 (67.53%), Postives = 339/425 (79.76%), Query Frame = 0


Query: 1   MPTLDEELFPSTPGKFKIEQRSYGINRQFYRFFASTSTMFLWALFLIAL-TVSYLSFQSF 60
           M  LD+   PS+PGKFK+E+ SY ++R   RF +S +    ++ FL+ L ++ +L     
Sbjct: 1   MSRLDD--IPSSPGKFKMEKSSY-LHR--LRFQSSLTKFAFFSFFLLCLISLLFLRSPPS 60

Query: 61  VHSGT------RHI-SASWGGRQWEKQVRTSAEIHRS--GGMSVLVTGASGFVGTHVSLA 120
           ++  +      R + + ++GG  WEK++R+SA I  S   G++VLVTGA+GFVGTHVS A
Sbjct: 61  INPSSPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAA 120

Query: 121 LKRRGDGVVGLDNFNNYYDPSLKKARKALVNRHGVFVVEGDVNDARLLDKLFDIVAFTHV 180
           LKRRGDGV+GLDNFN+YYDPSLK+AR+AL+ R G+F+VEGD+ND  LL KLF IV+FTHV
Sbjct: 121 LKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHV 180

Query: 181 MHLAAQAGVRYAMENPHSYVHSNIAGLVTLLEACKSADPQPAIVWASSSSVYGLNEKVPF 240
           MHLAAQAGVRYAMENP SYVHSNIAG V LLE CKS +PQPAIVWASSSSVYGLN KVPF
Sbjct: 181 MHLAAQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPF 240

Query: 241 SELDRTDQPASLYAATKKAGEEITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFMFTRN 300
           SE D+TDQPASLYAATKKAGEEI HTYNHIYGLS+TGLRFFTVYGPWGRPDMAYF FT++
Sbjct: 241 SEKDKTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKD 300

Query: 301 ILQGKPITVYRGKNKEDLARDFTYIDDIVKGCLGSLDTSGKSTGSGGKKRGQAPYRIFNL 360
           IL+GK I+++   N   +ARDFTYIDDIVKGCL +LDT+ KSTGSGGKKRG A  R+FNL
Sbjct: 301 ILKGKSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNL 360

Query: 361 GNTSPVTVPALVSILEEHLKTKAKKKIVDMPGNGDVPFTHANISSAQVEFGYKPRTDLQS 416
           GNTSPV V  LV ILE  LK KAKK ++ MP NGDVPFTHANIS AQ E GYKP TDLQ+
Sbjct: 361 GNTSPVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQT 420

The following BLAST results are available for this feature:

BLAST of CmaCh11G004330.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B6	1.6e-207	84.10	UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana OX=3702 GN=GAE1 PE=1 SV=1	[more]
Q9LPC1	9.4e-163	70.17	UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana OX=3702 GN=GAE2 PE=2 SV=1	[more]
O81312	8.8e-161	69.50	UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana OX=3702 GN=GAE3 PE=2 SV=1	[more]
Q9STI6	3.1e-158	67.85	UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana OX=3702 GN=GAE5 PE=2 SV=1	[more]
O22141	5.3e-158	67.53	UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana OX=3702 GN=GAE4 PE=1 SV=1	[more]

BLAST of CmaCh11G004330.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30440.1	1.2e-208	84.10	UDP-D-glucuronate 4-epimerase 1	[more]
AT1G02000.1	6.7e-164	70.17	UDP-D-glucuronate 4-epimerase 2	[more]
AT4G00110.1	6.2e-162	69.50	UDP-D-glucuronate 4-epimerase 3	[more]
AT4G12250.1	2.2e-159	67.85	UDP-D-glucuronate 4-epimerase 5	[more]
AT2G45310.1	3.8e-159	67.53	UDP-D-glucuronate 4-epimerase 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01713	NUCEPIMERASE	coord: 120..136 score: 67.97 coord: 385..402 score: 47.33 coord: 310..325 score: 68.98 coord: 345..360 score: 48.84
None	No IPR available	GENE3D	3.40.50.720		coord: 95..406 e-value: 6.4E-79 score: 267.4
None	No IPR available	GENE3D	3.90.25.10		coord: 271..415 e-value: 6.4E-79 score: 267.4
None	No IPR available	PANTHER	PTHR43574	EPIMERASE-RELATED	coord: 3..415
None	No IPR available	PANTHER	PTHR43574:SF53	UDP-GLUCURONATE 5-EPIMERASE	coord: 3..415
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 95..414 e-value: 1.3E-48 score: 166.1
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 88..415

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh11G004330	CmaCh11G004330	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G004330.1:exon:792	CmaCh11G004330.1:exon:792	exon
CmaCh11G004330.1:exon:791	CmaCh11G004330.1:exon:791	exon
CmaCh11G004330.1:exon:790	CmaCh11G004330.1:exon:790	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G004330.1:cds	CmaCh11G004330.1:cds	CDS
CmaCh11G004330.1:cds	CmaCh11G004330.1:cds_2	CDS
CmaCh11G004330.1:cds	CmaCh11G004330.1:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh11G004330.1	CmaCh11G004330.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003824	catalytic activity