CmaCh11G000040.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh11G000040.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type E3 ubiquitin transferase
Location	Cma_Chr11: 21237 .. 28132 (+)
Sequence length	2438
RNA-Seq Expression	CmaCh11G000040.1
Synteny	CmaCh11G000040.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCGCCGTCCCTTCCTTCGCACATTCTCCTATAAAATCCACTGTTGCAGCGACTAGCCGGCACGATGCGATCATCCAATCCCAATCGTTTCAATCGTCTATTCACAACGGGTCTGGGCTTTGGGTCTCCGTCTCCCCTCCCTCTCTCTGTCTCTCATTAGCACTCTCCTTCCCATGGCGCAGGTTTCTCAGTTGCCTTGCGACGGCGATGGCATTTGCATGCGCTGCCAGGCCAAGCCTTCCGACTTGGAGACGATCACTTGCAAAACTTGCGTCGCCCCTTGGCACGTCGGCTGTCTCTCAAATCCCCCTCAAATCCTGGCATCTACCCTTCAATGGGACTGTCCCGACTGTTCCCCCCCACCCGAAGATGCTTCCCTGCCTCCACCCGCTAGCTGTCCACTTCCCGTTACGCCTTCCAATGACCTGGTTACTGCGATTCGAGCCATTGAGGCCGATGCCTCCCTTACTGACCGCGAGAAGGCAAATAAGCGCCAGGAGCTCCTCAGTGGAAAGTCTCAGTCTGAGAAGGATGATCATGATGCCAACGAAAAAAGAGGGGACGATGTTTTGGATTTGTTCGACGAGAGATTGAAGTGCTCCTTTTGCATGCAGTTACCAGAAAGGCCCGTCACTGTAAGTTCCCCATCGCGTCTTTCTTTGCTTTCCTTAACATGCCGGGCCACCTGCTCCTTTTTTCTTGCCCTTGCTTTGCCTGCAACAATCTTTCACCGTGTTTTAAACTGTTCGTTATCTTCCAACTTACTGATTTTTTTTTTTTTTTTTTGTTTCGATTCACTTACTACAACTAATAAATGTTTTGGCTGTAATCTGTATAATTCATTTTTACAGTCTCACTTCAACTCATCTTCTGTACAATAGTTTAGACGAAATGAAACACGGCTGTTTATTGCCTATTGACGTTCATTTATTTTTCTGTCTTGAGAATTTCAGTGTATAAAATGTGGTTCCCCTATCATTTGTACTAATCGAAGTAAATTCTTAGTTTCAAAGGCCAGAGACTTATTTTAAGCAAATAGTATTCGTAATCAATTGCAATTTATGGTTTTTAACCTGGTCAGATAGCGTATGATTATGTCAATTAATGTCCATAGGCGTTTTAGGTTGTTATTAGAATTATCATTAATATTAAAATTCAGAAGCTTAATACGAGGTAGAAACGTATACTCTTGTATCATATAAAAAAAATTATATCGTTGTTGTATAACACCCTCAACCCTTCATCAATAAGCTTGGCCATTGCGAACTCAAAAGAGAAAAAAAAAAAGGGGGCTTGGCCATCATGTGGAAACACAGGTCTGATGAATATAACTATGATTGTTTATTATGGAAATGTGGATATAAAAGAACGGGTTGTCCTTGAAAGTTGTGAACATAGAATTATGCTATATGGTACTCGTTGTCTATCATGTTTTCTTAAAATTTTACTATTCTTTCCAAATACGTTTGGACAGTTTTGATGATGGTTACAAGTCCTAGACAGATCATTTGTTGATACCTGTATTGGATGTGCTCATCACAGATAATAATGAGAAGTTCTTTCAAATTTTATGTTCTAATGATTACTGCTGAACAAATGTTGTAGAACTTACTGTCAATCTAAACATAGTTTGATTGGTTAGACATATCCCTAATCAAAAAGGTTAGAGGTTTGAATCCCCGCCTTCACATTCTGTGGAACTGAAAAATGTTGTATGGTTTATAAAAAGATGTTGTGTGGTTGGAAGATAGAACCTTCAACTTTAAGGGAAGGCAATTGATGTTTTGTCTTAATGAGTTATGCTCAATTTGAAATATAAATGAATATTTTTTTTTTTGAATATCTGTTTCAGATTATTTTATGGACTTTTTTTAGATATGCTTATCTTATTTTCAGTTTCTATTAATTTGCATCTTAATGGTGGCCAAGTAGAGGCATGGCCGTACAAATAAAAAAAATTTGATAACTGATAACCATACGGGTGTTCTAAAATTATGGATGTCTGATTAATTGGTGCTGGGCCATCGGTTTTGAAAGTACAACAAATATATTTCATGAGTAAAATCCTCTTAATCAACTTTTGTTGTTTAATGTTTATTTCCTGATAAACCTTAGTTTGTCTGAAATAAGAAAATTTGTCTTAGAAGATTGTATCGTAAGTCATTATGCACCAGTCTTGTATTATGAGTTGCACTCAACACAATTATTAATTGTTGTTGGAGAAGATTATTGCGTGCTTATCTTGGGATGAAATAATAGATTTTGCACTTGAATGTCAAGTAGTTATTATAAAAAGGGAAATAATATTATAGAGGTTTGTAGGCTGTAACTGTTATCTTCATTTTTTTATATTAACTAAAGTTCCGTGTTTAGTTGTTTATTTATTATGGTGTCTCCAATTGTATATTGTGTGGATTTGGAAATGGCGATTCTTGTGGTTAAGTATTGTACAACTGTTATTTGTAGTGTTATTAGTGCCATATTGACCGTGACAAATATAGTGGAGCTAATTAAAGATGATGGTGTGTGAGTGTTTTAATGTACGATTCCCTGTTCATGAATCAGGTATACTCAATGGATAAGTAGTCAGATCTTTTCTTGTAATCTTTTTGTTAGTCATAGTAGTATGTTAGTTGTTGTTTATAAGGCTCAAATAGTTGTTTTACCAGAGTTTGGTCTTAATTCAAGATTGTTTTCATAGAATGTCATGTTACACCATCAGACACGCTTTTCTTCATTAAGAAACATGTTCATTGAACCATTGAATATTTCTTTCATTGTATGTTTGAAGTTATAATTTTCTGTGAATTTGTGCTGTTTTTGTAAAATTTTGACCTTTTCAGCTGGCACTTTTTCATTTTGGAATGTAATTGGAACCAATCTTTCATAAAATTTCTTATTTGCAATTATTGACTTAATTTTGTGGGGCGTGATTTTTAATCTACTCATGTTATTTTGGTGTATATATTTGTTTATATATTCTATAATCGTATAATTCAGAACTTTAAGGTATGTAATTGACTTTTCAAATATCTTTATTTTGATCAATATTAACATCTTGGTGCCCGTCAAGTGCCAAACACTTGATGATTCCTATTGGTTTGTATATTTGAAATTTTAGTATTACTGTTGATTACTTTAGGCATCTCGTTCATGTGCCATTAAAAGTTTGATAAATGGACTTTGTACTACATACTAATAAGAACGTGGCTATATCATTATCCAGACTCCATGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACAAGGAAAGAACACTTGTGCAAAGTGTCGCTGCGTGATTCCCTCCAAAATGGCTAGCCACCCCCGTATTAATTCTACACTTGTAGTGGCCATACGTATGGCTAAAATGTCAAAATCAATTATTTCTGGAGGATCTCAGAAGGTTTATCATGTTGTCCACAATCTAAATAGGCCAGATAAAGCCTATACCACTGACCGGGCACAAAAAAAAGGGAAAGCTAATGCTGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTCTTGCTGAAAATGATCCGGAGAGAAACCAGGGTGTTCTGGTTGGGGAATGTTGGGAGGATAGGTTAGAATGTCGCCAGTGGGGTGCTCACTTTCCACATGTTGCAGGCATAGCAGGGCAGTCAAATAACGGTGCACAATCAGTGGTACTTTCTGGTGGTTACCAAGATGATGAAGATCATGGGGAGTGGTTCCTCTACACTGGAAGGTTTTGGTTTCTATACTTTATGCAGTCTGTTCTTTACCTGTCCTTGTTAGTTATTATATCTTTATATGTTTTTTTCCCTGTCCTGCAAACTTATAACAAGCCAGGTATTCTGGCGGCCTGCTCTTGATTTGAATAATCTTTTAATAAATTGTTTTGTACCATTCCCCATCTTGTCTCTTCCATTTTCCTTTTTGTTTTTAGCTTTTGAAGATTTTGAGCTGTTTGGTACAGGGTAAATTTGATGGTATATTTATTTACTTACCTGAACATTTTTTTAATTCTCTTTTATATTATTCTGTCACTATGCACAATAAACCATTGCATTTGATGATTCTGCCTGTAATTTAATTGCAGTGGAGGTCGAGACCTTAGTGGGAACAAGCGTACAAGCAAGGATCAGTCTTTTGACCAGAAATTTGAGAAATCAAACAAAGCGCTACAAGTTAGTTGCTTGAATGGTTATCCTGTTAGAGTTGTTAGGTAGGTGGCTGCAAACTAATGCCTGATATTCATGATTTTGGGGTTTCTATTTCATTTGATGTGTTGTTGTACGTCCATTTTGTTTTGAACCTTCAGTTATACAAAATATATCTTTCTGAAGACAGTACCAAAACCTGGTTTACAGTGCCTTGGGTCTCTTCATATTTCATTTTCTACATAAAAGTTAGGAGAGTTTATGATTTAATTCCAGAGTGGGCGAAGAATTATTGGATTTCTATTTACTTAGAACTGGAAAAGCTCTTGGTTTAAATTAGTCTCATTTATTTTATGTCCAGTGTATGACGTGAGTAAACTTCTGATTTTGAAACTAAAGAATGCAATTAAATTAATACTGTTTTGGTTGAACATGTTCAAATTGTTTTTCCATGTAAGGTAGAGATATGGGAAAGGCAGACAACTTTCACTATTTTCTTTATCGCTTGTCAAAAGTGCATTGGTTTTTCATGCAAGAATTGAAGTTTCTTGGTGGACCTCTTTGGTTGTGATTGCATTACAATTGGTGAAATACCTTGGGAAACTAGTAGTACCCGTTGCTTCTTGATGTTGTATGTTCGGTTAGATCTTTATTCCATGTAGGGATGTGAAGTTTACTGACGTGGTATGTTAACCCTCTTGATAACAGATCTCACAAAGAAAAGCGTTCCTCATATGCTCCAGAAAAGGGGTTGCGGTATGATGGAATTTATAGGATTGAGAAGTGTTGGCGTAAAGTGGGAATTCAGGTATTGAAGCTTTTTATCCTTCCCTAAACTGCCATCTGTTTAACAGATTATTGATTAAATATGTATCCTGAAATTAGGGCTTTAAGGTATGTCGGTATTTGTTTGTTAGATGCGACAATGATCCTGCACCATGGACAAGGTTTGTGTTTTCTAACTATGTATCTTTTTTTCAGTTCATTCAAAATATGTAATTGCTTTTATGTTATCAAGTGCTAGTTGGCTTTGCCGTCTCTGGCTTTGCCTCCGAGGTCTTTTCCTTCATTAAACAAACACTCTCAACAAGTTTCTTAATTGCAGTGACGAACATGGAGATCGACCTAGACCCTTACCTGCAATTCCAGAGTTAAAAAAAGCAACAGACATTACGGAGAGGAAGAAAGATCCTTCATGGGACTTTGATGTGAGTACTCTTCAGTTATATTTCACTTACGAGATCCCCCTTTTCCTCCCAATATTTAACCTTTATTAAATTAGAATTAAAACCAACCCCGTTTCTTTCTGTGTAAATATCAGTTTTTTTTTTAAACTTGTACAAATTCCTTGAAGAAATGAAGAGCTCTCTATGAATTTGGGATGATTAGTAACCAAGGATAGTAGACTCTTTAATATGATATTTAGCTAATCTAGAGTACTCTTCTAGATATTTATAATGTTTGATTATATAATCACTTTACGCTAAATAAATTAGCTGTTGCAAATTTGTATGCAAATTCTGTTTTGAGGACTTCATAAACTCACTGTTTTTGGTTAAGGAACAATTTTTCTACAATTATCCAAGCTAATAAATGAAGCGTGGTGTGGTAAATTTGAGCATCTGCAAGTTTCTTTCAGGAGAAAGATAGTCGGTGGAAGTGGAGCAAACCTCCACCAACGAGCAAGAAGTCAGTTGAAACCGAAGATTCTACTTCTGGGAAGAAGTCAAGGAGGAGAATGAGGCAGTCGCATAATATGAATGTTCGAGAAAGGTTACTGAAAGGTTGTCTAATTATATAGTAAAGTCGCTAAAAAATGAAAAGGCTGTTTGGTGCTGAACCAACATTTTTAACATTTTCCACTTGTGCATGTAATTGTATATGCAGAATTTAGCTGCCTTATTTGCCGGGAGGTGATGAATCTGCCCATTACTACGCCTTGTGCCCATAACTTTTGTAAGTCATGTTTGGAAGGTGCTTTTGCGGGCAAGTCATTCTTGAGAGAGAGAAACAGTGGTGGACGGGCTCTTAGATCCCGGAAGAATGTCATGGCTTGCCCTTGTTGCCCGACGGATATATCTGATTTTCTACAGAATCTTCAGGTAATAAATCTGTGTGGTGAATGCCAGACAAATATTCTTTTCGTTTTAACATAAAGAAAATTGTTCCTCTTTCTCACTTGGCTAGTTGGTGGTATCAATAGGTAAATAGAGAATTGTTGGATGTGATCGAGTCGTTGAAAAGTAAGATTGAAGAAGCGGATGCATCTGAGAAGCCCTGTGAAGACGAGATAGAAGGGGAAGGGGAAGGGGAAGGGGAACAGGAAGAGGAGGGAAAAGATGGAAGCAACGGAAATGAAAGCAGCCGCCCTGTGGAAACAAGAAAGCGAGCAAAGGTGGTGGTTAATGGTGGGGAGGAAAATGATTCGCCGTCAAGCCCCGTCCACGTGGATGATTTGGAATGAACACAAGTGATGTTGGATGATGTGACGATGGGCTTGGGTAGTGGTATAATTTTGGGTAGATGGGCGCCTCTGTCATTTGATTTGAAGACAATATTGAGCAGCTATGTTGTTTAGTTATTGGAGACGCTAGACAGACAGGATTACTGTATTTCTTCTTCTTTTTTTTTTTTTTTAAGAACTTGTGTAAATGGTTCAGTTGTACTTGTAATACACAGCAATGGCATCAATACACAGCGATGGCATGATGGGAGTCGGT

mRNA sequence

AACCCGCCGTCCCTTCCTTCGCACATTCTCCTATAAAATCCACTGTTGCAGCGACTAGCCGGCACGATGCGATCATCCAATCCCAATCGTTTCAATCGTCTATTCACAACGGGTCTGGGCTTTGGGTCTCCGTCTCCCCTCCCTCTCTCTGTCTCTCATTAGCACTCTCCTTCCCATGGCGCAGGTTTCTCAGTTGCCTTGCGACGGCGATGGCATTTGCATGCGCTGCCAGGCCAAGCCTTCCGACTTGGAGACGATCACTTGCAAAACTTGCGTCGCCCCTTGGCACGTCGGCTGTCTCTCAAATCCCCCTCAAATCCTGGCATCTACCCTTCAATGGGACTGTCCCGACTGTTCCCCCCCACCCGAAGATGCTTCCCTGCCTCCACCCGCTAGCTGTCCACTTCCCGTTACGCCTTCCAATGACCTGGTTACTGCGATTCGAGCCATTGAGGCCGATGCCTCCCTTACTGACCGCGAGAAGGCAAATAAGCGCCAGGAGCTCCTCAGTGGAAAGTCTCAGTCTGAGAAGGATGATCATGATGCCAACGAAAAAAGAGGGGACGATGTTTTGGATTTGTTCGACGAGAGATTGAAGTGCTCCTTTTGCATGCAGTTACCAGAAAGGCCCGTCACTACTCCATGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACAAGGAAAGAACACTTGTGCAAAGTGTCGCTGCGTGATTCCCTCCAAAATGGCTAGCCACCCCCGTATTAATTCTACACTTGTAGTGGCCATACGTATGGCTAAAATGTCAAAATCAATTATTTCTGGAGGATCTCAGAAGGTTTATCATGTTGTCCACAATCTAAATAGGCCAGATAAAGCCTATACCACTGACCGGGCACAAAAAAAAGGGAAAGCTAATGCTGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTCTTGCTGAAAATGATCCGGAGAGAAACCAGGGTGTTCTGGTTGGGGAATGTTGGGAGGATAGGTTAGAATGTCGCCAGTGGGGTGCTCACTTTCCACATGTTGCAGGCATAGCAGGGCAGTCAAATAACGGTGCACAATCAGTGGTACTTTCTGGTGGTTACCAAGATGATGAAGATCATGGGGAGTGGTTCCTCTACACTGGAAGTGGAGGTCGAGACCTTAGTGGGAACAAGCGTACAAGCAAGGATCAGTCTTTTGACCAGAAATTTGAGAAATCAAACAAAGCGCTACAAGTTAGTTGCTTGAATGGTTATCCTGTTAGAGTTGTTAGATCTCACAAAGAAAAGCGTTCCTCATATGCTCCAGAAAAGGGGTTGCGGTATGATGGAATTTATAGGATTGAGAAGTGTTGGCGTAAAGTGGGAATTCAGGGCTTTAAGGTATGTCGGTATTTGTTTGTTAGATGCGACAATGATCCTGCACCATGGACAAGTGACGAACATGGAGATCGACCTAGACCCTTACCTGCAATTCCAGAGTTAAAAAAAGCAACAGACATTACGGAGAGGAAGAAAGATCCTTCATGGGACTTTGATGAGAAAGATAGTCGGTGGAAGTGGAGCAAACCTCCACCAACGAGCAAGAAGTCAGTTGAAACCGAAGATTCTACTTCTGGGAAGAAGTCAAGGAGGAGAATGAGGCAGTCGCATAATATGAATGTTCGAGAAAGGTTACTGAAAGAATTTAGCTGCCTTATTTGCCGGGAGGTGATGAATCTGCCCATTACTACGCCTTGTGCCCATAACTTTTGTAAGTCATGTTTGGAAGGTGCTTTTGCGGGCAAGTCATTCTTGAGAGAGAGAAACAGTGGTGGACGGGCTCTTAGATCCCGGAAGAATGTCATGGCTTGCCCTTGTTGCCCGACGGATATATCTGATTTTCTACAGAATCTTCAGGTAAATAGAGAATTGTTGGATGTGATCGAGTCGTTGAAAAGTAAGATTGAAGAAGCGGATGCATCTGAGAAGCCCTGTGAAGACGAGATAGAAGGGGAAGGGGAAGGGGAAGGGGAACAGGAAGAGGAGGGAAAAGATGGAAGCAACGGAAATGAAAGCAGCCGCCCTGTGGAAACAAGAAAGCGAGCAAAGGTGGTGGTTAATGGTGGGGAGGAAAATGATTCGCCGTCAAGCCCCGTCCACGTGGATGATTTGGAATGAACACAAGTGATGTTGGATGATGTGACGATGGGCTTGGGTAGTGGTATAATTTTGGGTAGATGGGCGCCTCTGTCATTTGATTTGAAGACAATATTGAGCAGCTATGTTGTTTAGTTATTGGAGACGCTAGACAGACAGGATTACTGTATTTCTTCTTCTTTTTTTTTTTTTTTAAGAACTTGTGTAAATGGTTCAGTTGTACTTGTAATACACAGCAATGGCATCAATACACAGCGATGGCATGATGGGAGTCGGT

Coding sequence (CDS)

ATGGCGCAGGTTTCTCAGTTGCCTTGCGACGGCGATGGCATTTGCATGCGCTGCCAGGCCAAGCCTTCCGACTTGGAGACGATCACTTGCAAAACTTGCGTCGCCCCTTGGCACGTCGGCTGTCTCTCAAATCCCCCTCAAATCCTGGCATCTACCCTTCAATGGGACTGTCCCGACTGTTCCCCCCCACCCGAAGATGCTTCCCTGCCTCCACCCGCTAGCTGTCCACTTCCCGTTACGCCTTCCAATGACCTGGTTACTGCGATTCGAGCCATTGAGGCCGATGCCTCCCTTACTGACCGCGAGAAGGCAAATAAGCGCCAGGAGCTCCTCAGTGGAAAGTCTCAGTCTGAGAAGGATGATCATGATGCCAACGAAAAAAGAGGGGACGATGTTTTGGATTTGTTCGACGAGAGATTGAAGTGCTCCTTTTGCATGCAGTTACCAGAAAGGCCCGTCACTACTCCATGTGGCCACAATTTCTGCTTAAAATGTTTCCAGAAGTGGATTGGACAAGGAAAGAACACTTGTGCAAAGTGTCGCTGCGTGATTCCCTCCAAAATGGCTAGCCACCCCCGTATTAATTCTACACTTGTAGTGGCCATACGTATGGCTAAAATGTCAAAATCAATTATTTCTGGAGGATCTCAGAAGGTTTATCATGTTGTCCACAATCTAAATAGGCCAGATAAAGCCTATACCACTGACCGGGCACAAAAAAAAGGGAAAGCTAATGCTGCAAGTGGAAAAATATTTGTTACAATTCCATCTGATCATTTTGGTCCTATTCTTGCTGAAAATGATCCGGAGAGAAACCAGGGTGTTCTGGTTGGGGAATGTTGGGAGGATAGGTTAGAATGTCGCCAGTGGGGTGCTCACTTTCCACATGTTGCAGGCATAGCAGGGCAGTCAAATAACGGTGCACAATCAGTGGTACTTTCTGGTGGTTACCAAGATGATGAAGATCATGGGGAGTGGTTCCTCTACACTGGAAGTGGAGGTCGAGACCTTAGTGGGAACAAGCGTACAAGCAAGGATCAGTCTTTTGACCAGAAATTTGAGAAATCAAACAAAGCGCTACAAGTTAGTTGCTTGAATGGTTATCCTGTTAGAGTTGTTAGATCTCACAAAGAAAAGCGTTCCTCATATGCTCCAGAAAAGGGGTTGCGGTATGATGGAATTTATAGGATTGAGAAGTGTTGGCGTAAAGTGGGAATTCAGGGCTTTAAGGTATGTCGGTATTTGTTTGTTAGATGCGACAATGATCCTGCACCATGGACAAGTGACGAACATGGAGATCGACCTAGACCCTTACCTGCAATTCCAGAGTTAAAAAAAGCAACAGACATTACGGAGAGGAAGAAAGATCCTTCATGGGACTTTGATGAGAAAGATAGTCGGTGGAAGTGGAGCAAACCTCCACCAACGAGCAAGAAGTCAGTTGAAACCGAAGATTCTACTTCTGGGAAGAAGTCAAGGAGGAGAATGAGGCAGTCGCATAATATGAATGTTCGAGAAAGGTTACTGAAAGAATTTAGCTGCCTTATTTGCCGGGAGGTGATGAATCTGCCCATTACTACGCCTTGTGCCCATAACTTTTGTAAGTCATGTTTGGAAGGTGCTTTTGCGGGCAAGTCATTCTTGAGAGAGAGAAACAGTGGTGGACGGGCTCTTAGATCCCGGAAGAATGTCATGGCTTGCCCTTGTTGCCCGACGGATATATCTGATTTTCTACAGAATCTTCAGGTAAATAGAGAATTGTTGGATGTGATCGAGTCGTTGAAAAGTAAGATTGAAGAAGCGGATGCATCTGAGAAGCCCTGTGAAGACGAGATAGAAGGGGAAGGGGAAGGGGAAGGGGAACAGGAAGAGGAGGGAAAAGATGGAAGCAACGGAAATGAAAGCAGCCGCCCTGTGGAAACAAGAAAGCGAGCAAAGGTGGTGGTTAATGGTGGGGAGGAAAATGATTCGCCGTCAAGCCCCGTCCACGTGGATGATTTGGAATGA

Protein sequence

MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDCSPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKDDHDANEKRGDDVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGKNTCAKCRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYTTDRAQKKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKALQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGFKVCRYLFVRCDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKPPPTSKKSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNFCKSCLEGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKIEEADASEKPCEDEIEGEGEGEGEQEEEGKDGSNGNESSRPVETRKRAKVVVNGGEENDSPSSPVHVDDLE

Homology

[Close]

BLAST of CmaCh11G000040.1 vs. ExPASy Swiss-Prot
Match: Q8VYZ0 (E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana OX=3702 GN=ORTH2 PE=1 SV=1)

HSP 1 Score: 864.4 bits (2232), Expect = 8.5e-250
Identity = 427/631 (67.67%), Postives = 499/631 (79.08%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA+  QLPCDGDG+CMRC++ P   E++TC TCV PWHV CLS+PP+ LASTLQW CPDC
Sbjct: 1   MARDIQLPCDGDGVCMRCKSNPPPEESLTCGTCVTPWHVSCLSSPPKTLASTLQWHCPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S   E   LP         +  +DLV AIRAIEAD SL+  EKA  RQ LLSGK   E D
Sbjct: 61  S--GEIDPLPVSGGATGFESAGSDLVAAIRAIEADESLSTEEKAKMRQRLLSGKGVEEDD 120

Query: 121 DHDANEKRGD------DVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGK 180
           + +  +K+G       DVL    + L CSFCMQLPERPVT PCGHN CLKCF+KW+GQGK
Sbjct: 121 EEEKRKKKGKGKNPNLDVLSALGDNLMCSFCMQLPERPVTKPCGHNACLKCFEKWMGQGK 180

Query: 181 NTCAKCRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYT 240
            TC KCR +IP KMA +PRINS+LV AIR+AK+SKS  +  + KV+H + N +RPDKA+T
Sbjct: 181 RTCGKCRSIIPEKMAKNPRINSSLVAAIRLAKVSKS-AAATTSKVFHFISNQDRPDKAFT 240

Query: 241 TDRAQKKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHF 300
           T+RA+K GKANAASGKI+VTIP DHFGPI AENDP RNQG+LVGE WEDRLECRQWGAHF
Sbjct: 241 TERAKKTGKANAASGKIYVTIPPDHFGPIPAENDPVRNQGLLVGESWEDRLECRQWGAHF 300

Query: 301 PHVAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFE 360
           PHVAGIAGQS  GAQSV LSGGY+DDEDHGEWFLYTGSGGRDLSGNKRT+K+QSFDQKFE
Sbjct: 301 PHVAGIAGQSTYGAQSVALSGGYKDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFE 360

Query: 361 KSNKALQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQG-FKVCR 420
           KSN AL++SC  GYPVRVVRSHKEKRS+YAPE+G+RYDG+YRIEKCWRKVG+QG FKVCR
Sbjct: 361 KSNAALKLSCKLGYPVRVVRSHKEKRSAYAPEEGVRYDGVYRIEKCWRKVGVQGSFKVCR 420

Query: 421 YLFVRCDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKP 480
           YLFVRCDN+PAPWTSDE+GDRPRP+P IPEL  ATD+ ERK+ PSWDFDE +  WKW KP
Sbjct: 421 YLFVRCDNEPAPWTSDENGDRPRPIPNIPELNMATDLFERKETPSWDFDEGEGCWKWMKP 480

Query: 481 PPTSKKSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNF 540
           PP SKKSV        K  R+ ++ +H+  +R RLLKEF C IC++V+ LP+TTPCAHNF
Sbjct: 481 PPASKKSVNVLAPEERKNLRKAIKAAHSNTMRARLLKEFKCQICQQVLTLPVTTPCAHNF 540

Query: 541 CKSCLEGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIES 600
           CK+CLE  FAGK+ +RER++GGR LRSRKNV+ CPCCPTDISDFLQN QVNRE+ +VIE 
Sbjct: 541 CKACLEAKFAGKTLVRERSTGGRTLRSRKNVLNCPCCPTDISDFLQNPQVNREVAEVIEK 600

Query: 601 LKSKIEEADASEKPCEDEIEGEGEGEGEQEE 625
           LK+  +E D +E   EDE EGE  G   +E+
Sbjct: 601 LKT--QEEDTAE--LEDEDEGECSGTTPEED 624

[Close]

BLAST of CmaCh11G000040.1 vs. ExPASy Swiss-Prot
Match: Q680I0 (E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana OX=3702 GN=ORTH5 PE=2 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 5.4e-220
Identity = 382/621 (61.51%), Postives = 464/621 (74.72%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA  +QLPCDGDG+CMRCQ  P   ET+TC TCV PWHV CL  P  + +ST  W+CPDC
Sbjct: 1   MAIQTQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S      S  P      P +  + LVTAIRAI+AD +LT+ EKA KRQ L+SG      D
Sbjct: 61  SGVVV-PSAAPGTGISGPESSGSVLVTAIRAIQADVTLTEAEKAKKRQRLMSGGGDDGVD 120

Query: 121 DHDANEKRGDDVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKW-IGQGKNTCAK 180
           D +  +      L++F     CS C+QLPERPVTTPCGHNFCLKCF+KW +GQGK TC  
Sbjct: 121 DEEKKK------LEIF-----CSICIQLPERPVTTPCGHNFCLKCFEKWAVGQGKLTCMI 180

Query: 181 CRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYTTDRAQ 240
           CR  IP  +A +PRIN  LV AIR+A ++K      + KV+H++ N +RPDKA+TT+RA 
Sbjct: 181 CRSKIPRHVAKNPRINLALVSAIRLANVTKCSGEATAAKVHHIIRNQDRPDKAFTTERAV 240

Query: 241 KKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAG 300
           K GKANAASGK FVTIP DHFGPI A ND  RNQGVLVGE WEDR ECRQWG HFPHVAG
Sbjct: 241 KTGKANAASGKFFVTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECRQWGVHFPHVAG 300

Query: 301 IAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKA 360
           IAGQ+  GAQSV LSGGY DDEDHGEWFLYTGSGGRDLSGNKR +K QS DQ F+  N+A
Sbjct: 301 IAGQAAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEA 360

Query: 361 LQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGF-KVCRYLFVR 420
           L++SC  GYPVRVVRS KEKRS+YAP +G+RYDG+YRIEKCW  VG+QG  K+CRYLFVR
Sbjct: 361 LRLSCKMGYPVRVVRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVR 420

Query: 421 CDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKPPPTSK 480
           CDN+PAPWTSDEHGDRPRPLP +PEL+ ATD+  RK+ PSW FDE + RWKW K PP S+
Sbjct: 421 CDNEPAPWTSDEHGDRPRPLPDVPELENATDLFVRKESPSWGFDEAEGRWKWMKSPPVSR 480

Query: 481 KSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNFCKSCL 540
            +++TE+    +K  +R ++ +N  ++ RLLKEFSC ICR+V++LP+TTPCAHNFCK+CL
Sbjct: 481 MALDTEE----RKKNKRAKKGNNA-MKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACL 540

Query: 541 EGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKI 600
           E  FAG + LR+R++G R LR++KN+M CPCC TD+S+FLQN QVNRE++++IE+ K   
Sbjct: 541 EAKFAGITQLRDRSNGVRKLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSE 600

Query: 601 EEADASEKPCEDEIEGEGEGE 620
           EEA+ +E     E EGE E E
Sbjct: 601 EEAEVAESSNISEEEGEEESE 603

[Close]

BLAST of CmaCh11G000040.1 vs. ExPASy Swiss-Prot
Match: Q9FKA7 (E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana OX=3702 GN=ORTH1 PE=1 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 9.2e-220
Identity = 386/638 (60.50%), Postives = 473/638 (74.14%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA  +QLPCDGDG+CMRCQ  P   ET+TC TCV PWHV CL  P  + +ST +W+CPDC
Sbjct: 1   MAIETQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVPCLL-PESLASSTGEWECPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S     ++ P   +   P +  + LV AIRAI+AD +LT+ EKA KRQ+L+SG      D
Sbjct: 61  SGVVVPSAAPGTGNA-RPESSGSVLVAAIRAIQADETLTEAEKAKKRQKLMSGGGD---D 120

Query: 121 DHDANEKRGDDVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKW-IGQGKNTCAK 180
             D  EK+    L++F     CS C+QLPERP+TTPCGHNFCLKCF+KW +GQGK TC  
Sbjct: 121 GVDEEEKK---KLEIF-----CSICIQLPERPITTPCGHNFCLKCFEKWAVGQGKLTCMI 180

Query: 181 CRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYTTDRAQ 240
           CR  IP  +A +PRIN  LV AIR+A ++K  +   + KV+H++ N +RP+KA+TT+RA 
Sbjct: 181 CRSKIPRHVAKNPRINLALVSAIRLANVTKCSVEATAAKVHHIIRNQDRPEKAFTTERAV 240

Query: 241 KKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAG 300
           K GKANAASGK FVTIP DHFGPI AEND  R QGVLVGE WEDR ECRQWGAHFPH+AG
Sbjct: 241 KTGKANAASGKFFVTIPRDHFGPIPAENDVTRKQGVLVGESWEDRQECRQWGAHFPHIAG 300

Query: 301 IAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKA 360
           IAGQS  GAQSV LSGGY DDEDHGEWFLYTGSGGRDLSGNKR +K QS DQ F+  N++
Sbjct: 301 IAGQSAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRINKKQSSDQAFKNMNES 360

Query: 361 LQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQG-FKVCRYLFVR 420
           L++SC  GYPVRVVRS KEKRS+YAP +G+RYDG+YRIEKCW  VG+QG FKVCRYLFVR
Sbjct: 361 LRLSCKMGYPVRVVRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGSFKVCRYLFVR 420

Query: 421 CDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKPPPTSK 480
           CDN+PAPWTSDEHGDRPRPLP +PEL+ A D+  RK+ PSWDFDE + RWKW K PP S+
Sbjct: 421 CDNEPAPWTSDEHGDRPRPLPNVPELETAADLFVRKESPSWDFDEAEGRWKWMKSPPVSR 480

Query: 481 KSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNFCKSCL 540
            +++ E+    K+++  M        + RLLKEFSC ICREV++LP+TTPCAHNFCK+CL
Sbjct: 481 MALDPEERKKNKRAKNTM--------KARLLKEFSCQICREVLSLPVTTPCAHNFCKACL 540

Query: 541 EGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKI 600
           E  FAG + LRER++GGR LR++KN+M CPCC TD+S+FLQN QVNRE++++IE+ K   
Sbjct: 541 EAKFAGITQLRERSNGGRKLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSE 600

Query: 601 EEADASEKPCEDEIEGEGEGEGEQEEEGKDGSNGNESS 637
           EEADAS    E+E E E   +  + +    G +G   S
Sbjct: 601 EEADASISE-EEEEESEPPTKKIKMDNNSVGGSGTSLS 616

[Close]

BLAST of CmaCh11G000040.1 vs. ExPASy Swiss-Prot
Match: Q9C8E1 (Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana OX=3702 GN=ORTH4 PE=3 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 1.4e-215
Identity = 382/638 (59.87%), Postives = 470/638 (73.67%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA  +QLPCDGDG+CMRCQ  P   ET+TC TCV PWHV CL  P  + +ST  W+CPDC
Sbjct: 1   MAIQTQLPCDGDGVCMRCQVTPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S      S  P      P +  + LV AIRAI+AD +LT+ EKA KRQ L+SG      D
Sbjct: 61  SGVVV-PSAAPGTGISGPESSGSVLVAAIRAIQADVTLTEAEKAKKRQRLMSGGGDDGVD 120

Query: 121 DHDANEKRGDDVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKW-IGQGKNTCAK 180
           D +  +      L++F     CS C+QLPERPVTTPCGHNFCLKCF+KW +GQGK TC  
Sbjct: 121 DEEKKK------LEIF-----CSICIQLPERPVTTPCGHNFCLKCFEKWAVGQGKLTCMI 180

Query: 181 CRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYTTDRAQ 240
           CR  IP  +A +PRIN  LV AIR+A ++K      + KV+H++ N +RPDKA+TT+RA 
Sbjct: 181 CRSKIPRHVAKNPRINLALVSAIRLANVTKCSGEATAAKVHHIIRNQDRPDKAFTTERAV 240

Query: 241 KKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAG 300
           K GKANAASGK FVTIP DHFGPI A ND  RNQGVLVGE WEDR ECRQWG HFPHVAG
Sbjct: 241 KTGKANAASGKFFVTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECRQWGVHFPHVAG 300

Query: 301 IAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKA 360
           IAGQ+  GAQSV LSGGY DDEDHGEWFLYTGSGGRDLSGNKR +K QS DQ F+  N+A
Sbjct: 301 IAGQAAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEA 360

Query: 361 LQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGF-KVCRYLFVR 420
           L++SC  GYPVRVVRS KEKRS+YAP +G+RYDG+YRIEKCW  VG+QG  K+CRYLFVR
Sbjct: 361 LRLSCKMGYPVRVVRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVR 420

Query: 421 CDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKPPPTSK 480
           CDN+PAPWTSDEHGDRPRPLP +PEL+ ATD+  RK+ PSW FDE + RWKW K PP S+
Sbjct: 421 CDNEPAPWTSDEHGDRPRPLPDVPELENATDLFVRKESPSWGFDEAEGRWKWMKSPPVSR 480

Query: 481 KSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNFCKSCL 540
            +++TE+    +K  +R ++ +N  ++ RLLKEFSC ICR+V++LP+TTPCAHNFCK+CL
Sbjct: 481 MALDTEE----RKKNKRAKKGNNA-MKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACL 540

Query: 541 EGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKI 600
           E  FAG + LR+R++G R LR++KN+M CPCC TD+S+FLQN QVNRE++++IE+ K   
Sbjct: 541 EAKFAGITQLRDRSNGVRKLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSE 600

Query: 601 EEADASEKPCEDEIEGEGEGEGEQEEEGKDGSNGNESS 637
           EEA+ +E     E E E E E   ++   D ++  ++S
Sbjct: 601 EEAEVAESSNISE-EEEEESEPPTKKIKMDNNSVGDTS 619

[Close]

BLAST of CmaCh11G000040.1 vs. ExPASy Swiss-Prot
Match: Q9FVS2 (E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana OX=3702 GN=ORTH3 PE=3 SV=2)

HSP 1 Score: 736.5 bits (1900), Expect = 2.7e-211
Identity = 376/646 (58.20%), Postives = 466/646 (72.14%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           M   +Q PCD +G+CMRC++ P   E++TC TCV PWHV CL +PP+ L++TLQW CPDC
Sbjct: 1   MTPATQYPCDPEGVCMRCKSMPPPEESLTCGTCVTPWHVSCLLSPPETLSATLQWLCPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S   E   LP         +  +DLV AI +IEAD +L+  EKA K+Q+LLSGK   ++D
Sbjct: 61  S--GETNPLPVSGVAAGYGSVGSDLVAAIHSIEADETLSAEEKAKKKQQLLSGKGVVDED 120

Query: 121 DHDANEK--RGDDVLDLFDERLKCSFCMQLPERPV-----------------TTPCGHNF 180
           D +  +K  +G   +D+     +CSFCMQ  ++PV                 +TPCGHN 
Sbjct: 121 DEEEKKKTSKGKKPIDVL-SHFECSFCMQSLQKPVSVRVLFALALMLVWFLESTPCGHNA 180

Query: 181 CLKCFQKWIGQGKNTCAKCRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYH 240
           CLKCF KW+GQG  +C  CR VIP  M ++PRIN ++V AIR+A++S+      + KV H
Sbjct: 181 CLKCFLKWMGQGHRSCGTCRSVIPESMVTNPRINLSIVSAIRLARVSEK-ADARTSKVVH 240

Query: 241 VVHNLNRPDKAYTTDRAQKKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECW 300
            V N +RPDKA+TT+RA+K G ANA+SGKIFVTIP DHFGPI AENDP RNQG+LVGE W
Sbjct: 241 YVDNEDRPDKAFTTERAKKTGNANASSGKIFVTIPRDHFGPIPAENDPVRNQGLLVGESW 300

Query: 301 EDRLECRQWGAHFPHVAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNK 360
           + RL CRQWGAHFPHV+GIAGQ++ GAQSVVL+GGY DDEDHGEWFLYTGSGGR L GNK
Sbjct: 301 KGRLACRQWGAHFPHVSGIAGQASYGAQSVVLAGGYDDDEDHGEWFLYTGSGGRILKGNK 360

Query: 361 RTSKDQSFDQKFEKSNKALQVSCLNGYPVRVVRSHKEKRSSYAPEKG-LRYDGIYRIEKC 420
           RT+  Q+FDQ F   N+AL++SC  GYPVRVVRS K+KRS YAP+ G LRYDG+YRIEKC
Sbjct: 361 RTNTVQAFDQVFLNFNEALRLSCKLGYPVRVVRSTKDKRSPYAPQGGLLRYDGVYRIEKC 420

Query: 421 WRKVGIQGFKVCRYLFVRCDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWD 480
           WR VGIQ   +CR+LFVRCDN+PAPWTSDEHGDRPRPLP +PEL  ATD+ ERK+ PSWD
Sbjct: 421 WRIVGIQ---MCRFLFVRCDNEPAPWTSDEHGDRPRPLPNVPELNMATDLFERKESPSWD 480

Query: 481 FDEKDSRWKWSKPPPTSKKSVETEDSTSGKKSRRRMRQSHNMN-VRERLLKEFSCLICRE 540
           FDE + RW+W KPPP SKK+V+       +K  R   +S N N +R RLLKEF C IC++
Sbjct: 481 FDEGEDRWRWMKPPPASKKAVKNVLDPEERKLLREAIKSANPNTMRARLLKEFKCQICQK 540

Query: 541 VMNLPITTPCAHNFCKSCLEGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQ 600
           VM  P+TTPCAHNFCK+CLE  FAG + +RER SGGR LRS+K+VM CPCCPTDI++F+Q
Sbjct: 541 VMTNPVTTPCAHNFCKACLESKFAGTALVRERGSGGRKLRSQKSVMKCPCCPTDIAEFVQ 600

Query: 601 NLQVNRELLDVIESLKSKIEEADASEKPCEDEIEGEGEGEGEQEEE 626
           N QVNRE+ +VIE LK + EE +A         EG+  G   +EE+
Sbjct: 601 NPQVNREVAEVIEKLKKQEEEENAKSLD-----EGQCSGTSHEEED 634

[Close]

BLAST of CmaCh11G000040.1 vs. TAIR 10
Match: AT1G57820.1 (Zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 864.4 bits (2232), Expect = 6.1e-251
Identity = 427/631 (67.67%), Postives = 499/631 (79.08%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA+  QLPCDGDG+CMRC++ P   E++TC TCV PWHV CLS+PP+ LASTLQW CPDC
Sbjct: 1   MARDIQLPCDGDGVCMRCKSNPPPEESLTCGTCVTPWHVSCLSSPPKTLASTLQWHCPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S   E   LP         +  +DLV AIRAIEAD SL+  EKA  RQ LLSGK   E D
Sbjct: 61  S--GEIDPLPVSGGATGFESAGSDLVAAIRAIEADESLSTEEKAKMRQRLLSGKGVEEDD 120

Query: 121 DHDANEKRGD------DVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGK 180
           + +  +K+G       DVL    + L CSFCMQLPERPVT PCGHN CLKCF+KW+GQGK
Sbjct: 121 EEEKRKKKGKGKNPNLDVLSALGDNLMCSFCMQLPERPVTKPCGHNACLKCFEKWMGQGK 180

Query: 181 NTCAKCRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYT 240
            TC KCR +IP KMA +PRINS+LV AIR+AK+SKS  +  + KV+H + N +RPDKA+T
Sbjct: 181 RTCGKCRSIIPEKMAKNPRINSSLVAAIRLAKVSKS-AAATTSKVFHFISNQDRPDKAFT 240

Query: 241 TDRAQKKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHF 300
           T+RA+K GKANAASGKI+VTIP DHFGPI AENDP RNQG+LVGE WEDRLECRQWGAHF
Sbjct: 241 TERAKKTGKANAASGKIYVTIPPDHFGPIPAENDPVRNQGLLVGESWEDRLECRQWGAHF 300

Query: 301 PHVAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFE 360
           PHVAGIAGQS  GAQSV LSGGY+DDEDHGEWFLYTGSGGRDLSGNKRT+K+QSFDQKFE
Sbjct: 301 PHVAGIAGQSTYGAQSVALSGGYKDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFE 360

Query: 361 KSNKALQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQG-FKVCR 420
           KSN AL++SC  GYPVRVVRSHKEKRS+YAPE+G+RYDG+YRIEKCWRKVG+QG FKVCR
Sbjct: 361 KSNAALKLSCKLGYPVRVVRSHKEKRSAYAPEEGVRYDGVYRIEKCWRKVGVQGSFKVCR 420

Query: 421 YLFVRCDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKP 480
           YLFVRCDN+PAPWTSDE+GDRPRP+P IPEL  ATD+ ERK+ PSWDFDE +  WKW KP
Sbjct: 421 YLFVRCDNEPAPWTSDENGDRPRPIPNIPELNMATDLFERKETPSWDFDEGEGCWKWMKP 480

Query: 481 PPTSKKSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNF 540
           PP SKKSV        K  R+ ++ +H+  +R RLLKEF C IC++V+ LP+TTPCAHNF
Sbjct: 481 PPASKKSVNVLAPEERKNLRKAIKAAHSNTMRARLLKEFKCQICQQVLTLPVTTPCAHNF 540

Query: 541 CKSCLEGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIES 600
           CK+CLE  FAGK+ +RER++GGR LRSRKNV+ CPCCPTDISDFLQN QVNRE+ +VIE 
Sbjct: 541 CKACLEAKFAGKTLVRERSTGGRTLRSRKNVLNCPCCPTDISDFLQNPQVNREVAEVIEK 600

Query: 601 LKSKIEEADASEKPCEDEIEGEGEGEGEQEE 625
           LK+  +E D +E   EDE EGE  G   +E+
Sbjct: 601 LKT--QEEDTAE--LEDEDEGECSGTTPEED 624

[Close]

BLAST of CmaCh11G000040.1 vs. TAIR 10
Match: AT1G57820.2 (Zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 853.2 bits (2203), Expect = 1.4e-247
Identity = 424/631 (67.19%), Postives = 496/631 (78.61%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA+  QLPCDGDG+CMRC++ P   E++TC TCV PWHV CLS+PP+ LASTLQW CPDC
Sbjct: 1   MARDIQLPCDGDGVCMRCKSNPPPEESLTCGTCVTPWHVSCLSSPPKTLASTLQWHCPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S   E   LP         +  +DLV AIRAIEAD SL+  EKA  RQ LLSGK   E D
Sbjct: 61  S--GEIDPLPVSGGATGFESAGSDLVAAIRAIEADESLSTEEKAKMRQRLLSGKGVEEDD 120

Query: 121 DHDANEKRGD------DVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKWIGQGK 180
           + +  +K+G       DVL    + L CSFCMQLPERPVT PCGHN CLKCF+KW+GQGK
Sbjct: 121 EEEKRKKKGKGKNPNLDVLSALGDNLMCSFCMQLPERPVTKPCGHNACLKCFEKWMGQGK 180

Query: 181 NTCAKCRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYT 240
            TC KCR +IP KMA +PRINS+LV AIR+AK+SKS  +  + KV+H + N +RPDKA+T
Sbjct: 181 RTCGKCRSIIPEKMAKNPRINSSLVAAIRLAKVSKS-AAATTSKVFHFISNQDRPDKAFT 240

Query: 241 TDRAQKKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHF 300
           T+RA+K GKANAASGKI+VTIP DHFGPI AENDP RNQG+LVGE WEDRLECRQWGAHF
Sbjct: 241 TERAKKTGKANAASGKIYVTIPPDHFGPIPAENDPVRNQGLLVGESWEDRLECRQWGAHF 300

Query: 301 PHVAGIAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFE 360
           PHVAGIAGQS  GAQSV LSGGY+DDEDHGEWFLYT   GRDLSGNKRT+K+QSFDQKFE
Sbjct: 301 PHVAGIAGQSTYGAQSVALSGGYKDDEDHGEWFLYT---GRDLSGNKRTNKEQSFDQKFE 360

Query: 361 KSNKALQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQG-FKVCR 420
           KSN AL++SC  GYPVRVVRSHKEKRS+YAPE+G+RYDG+YRIEKCWRKVG+QG FKVCR
Sbjct: 361 KSNAALKLSCKLGYPVRVVRSHKEKRSAYAPEEGVRYDGVYRIEKCWRKVGVQGSFKVCR 420

Query: 421 YLFVRCDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKP 480
           YLFVRCDN+PAPWTSDE+GDRPRP+P IPEL  ATD+ ERK+ PSWDFDE +  WKW KP
Sbjct: 421 YLFVRCDNEPAPWTSDENGDRPRPIPNIPELNMATDLFERKETPSWDFDEGEGCWKWMKP 480

Query: 481 PPTSKKSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNF 540
           PP SKKSV        K  R+ ++ +H+  +R RLLKEF C IC++V+ LP+TTPCAHNF
Sbjct: 481 PPASKKSVNVLAPEERKNLRKAIKAAHSNTMRARLLKEFKCQICQQVLTLPVTTPCAHNF 540

Query: 541 CKSCLEGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIES 600
           CK+CLE  FAGK+ +RER++GGR LRSRKNV+ CPCCPTDISDFLQN QVNRE+ +VIE 
Sbjct: 541 CKACLEAKFAGKTLVRERSTGGRTLRSRKNVLNCPCCPTDISDFLQNPQVNREVAEVIEK 600

Query: 601 LKSKIEEADASEKPCEDEIEGEGEGEGEQEE 625
           LK+  +E D +E   EDE EGE  G   +E+
Sbjct: 601 LKT--QEEDTAE--LEDEDEGECSGTTPEED 621

[Close]

BLAST of CmaCh11G000040.1 vs. TAIR 10
Match: AT1G66050.1 (Zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 765.4 bits (1975), Expect = 3.8e-221
Identity = 382/621 (61.51%), Postives = 464/621 (74.72%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA  +QLPCDGDG+CMRCQ  P   ET+TC TCV PWHV CL  P  + +ST  W+CPDC
Sbjct: 1   MAIQTQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S      S  P      P +  + LVTAIRAI+AD +LT+ EKA KRQ L+SG      D
Sbjct: 61  SGVVV-PSAAPGTGISGPESSGSVLVTAIRAIQADVTLTEAEKAKKRQRLMSGGGDDGVD 120

Query: 121 DHDANEKRGDDVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKW-IGQGKNTCAK 180
           D +  +      L++F     CS C+QLPERPVTTPCGHNFCLKCF+KW +GQGK TC  
Sbjct: 121 DEEKKK------LEIF-----CSICIQLPERPVTTPCGHNFCLKCFEKWAVGQGKLTCMI 180

Query: 181 CRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYTTDRAQ 240
           CR  IP  +A +PRIN  LV AIR+A ++K      + KV+H++ N +RPDKA+TT+RA 
Sbjct: 181 CRSKIPRHVAKNPRINLALVSAIRLANVTKCSGEATAAKVHHIIRNQDRPDKAFTTERAV 240

Query: 241 KKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAG 300
           K GKANAASGK FVTIP DHFGPI A ND  RNQGVLVGE WEDR ECRQWG HFPHVAG
Sbjct: 241 KTGKANAASGKFFVTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECRQWGVHFPHVAG 300

Query: 301 IAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKA 360
           IAGQ+  GAQSV LSGGY DDEDHGEWFLYTGSGGRDLSGNKR +K QS DQ F+  N+A
Sbjct: 301 IAGQAAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEA 360

Query: 361 LQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGF-KVCRYLFVR 420
           L++SC  GYPVRVVRS KEKRS+YAP +G+RYDG+YRIEKCW  VG+QG  K+CRYLFVR
Sbjct: 361 LRLSCKMGYPVRVVRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVR 420

Query: 421 CDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKPPPTSK 480
           CDN+PAPWTSDEHGDRPRPLP +PEL+ ATD+  RK+ PSW FDE + RWKW K PP S+
Sbjct: 421 CDNEPAPWTSDEHGDRPRPLPDVPELENATDLFVRKESPSWGFDEAEGRWKWMKSPPVSR 480

Query: 481 KSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNFCKSCL 540
            +++TE+    +K  +R ++ +N  ++ RLLKEFSC ICR+V++LP+TTPCAHNFCK+CL
Sbjct: 481 MALDTEE----RKKNKRAKKGNNA-MKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACL 540

Query: 541 EGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKI 600
           E  FAG + LR+R++G R LR++KN+M CPCC TD+S+FLQN QVNRE++++IE+ K   
Sbjct: 541 EAKFAGITQLRDRSNGVRKLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSE 600

Query: 601 EEADASEKPCEDEIEGEGEGE 620
           EEA+ +E     E EGE E E
Sbjct: 601 EEAEVAESSNISEEEGEEESE 603

[Close]

BLAST of CmaCh11G000040.1 vs. TAIR 10
Match: AT5G39550.1 (Zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 764.6 bits (1973), Expect = 6.5e-221
Identity = 386/638 (60.50%), Postives = 473/638 (74.14%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA  +QLPCDGDG+CMRCQ  P   ET+TC TCV PWHV CL  P  + +ST +W+CPDC
Sbjct: 1   MAIETQLPCDGDGVCMRCQVNPPSEETLTCGTCVTPWHVPCLL-PESLASSTGEWECPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S     ++ P   +   P +  + LV AIRAI+AD +LT+ EKA KRQ+L+SG      D
Sbjct: 61  SGVVVPSAAPGTGNA-RPESSGSVLVAAIRAIQADETLTEAEKAKKRQKLMSGGGD---D 120

Query: 121 DHDANEKRGDDVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKW-IGQGKNTCAK 180
             D  EK+    L++F     CS C+QLPERP+TTPCGHNFCLKCF+KW +GQGK TC  
Sbjct: 121 GVDEEEKK---KLEIF-----CSICIQLPERPITTPCGHNFCLKCFEKWAVGQGKLTCMI 180

Query: 181 CRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYTTDRAQ 240
           CR  IP  +A +PRIN  LV AIR+A ++K  +   + KV+H++ N +RP+KA+TT+RA 
Sbjct: 181 CRSKIPRHVAKNPRINLALVSAIRLANVTKCSVEATAAKVHHIIRNQDRPEKAFTTERAV 240

Query: 241 KKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAG 300
           K GKANAASGK FVTIP DHFGPI AEND  R QGVLVGE WEDR ECRQWGAHFPH+AG
Sbjct: 241 KTGKANAASGKFFVTIPRDHFGPIPAENDVTRKQGVLVGESWEDRQECRQWGAHFPHIAG 300

Query: 301 IAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKA 360
           IAGQS  GAQSV LSGGY DDEDHGEWFLYTGSGGRDLSGNKR +K QS DQ F+  N++
Sbjct: 301 IAGQSAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRINKKQSSDQAFKNMNES 360

Query: 361 LQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQG-FKVCRYLFVR 420
           L++SC  GYPVRVVRS KEKRS+YAP +G+RYDG+YRIEKCW  VG+QG FKVCRYLFVR
Sbjct: 361 LRLSCKMGYPVRVVRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGSFKVCRYLFVR 420

Query: 421 CDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKPPPTSK 480
           CDN+PAPWTSDEHGDRPRPLP +PEL+ A D+  RK+ PSWDFDE + RWKW K PP S+
Sbjct: 421 CDNEPAPWTSDEHGDRPRPLPNVPELETAADLFVRKESPSWDFDEAEGRWKWMKSPPVSR 480

Query: 481 KSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNFCKSCL 540
            +++ E+    K+++  M        + RLLKEFSC ICREV++LP+TTPCAHNFCK+CL
Sbjct: 481 MALDPEERKKNKRAKNTM--------KARLLKEFSCQICREVLSLPVTTPCAHNFCKACL 540

Query: 541 EGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKI 600
           E  FAG + LRER++GGR LR++KN+M CPCC TD+S+FLQN QVNRE++++IE+ K   
Sbjct: 541 EAKFAGITQLRERSNGGRKLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSE 600

Query: 601 EEADASEKPCEDEIEGEGEGEGEQEEEGKDGSNGNESS 637
           EEADAS    E+E E E   +  + +    G +G   S
Sbjct: 601 EEADASISE-EEEEESEPPTKKIKMDNNSVGGSGTSLS 616

[Close]

BLAST of CmaCh11G000040.1 vs. TAIR 10
Match: AT1G66040.1 (Zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 750.7 bits (1937), Expect = 9.8e-217
Identity = 382/638 (59.87%), Postives = 470/638 (73.67%), Query Frame = 0


Query: 1   MAQVSQLPCDGDGICMRCQAKPSDLETITCKTCVAPWHVGCLSNPPQILASTLQWDCPDC 60
           MA  +QLPCDGDG+CMRCQ  P   ET+TC TCV PWHV CL  P  + +ST  W+CPDC
Sbjct: 1   MAIQTQLPCDGDGVCMRCQVTPPSEETLTCGTCVTPWHVSCLL-PESLASSTGDWECPDC 60

Query: 61  SPPPEDASLPPPASCPLPVTPSNDLVTAIRAIEADASLTDREKANKRQELLSGKSQSEKD 120
           S      S  P      P +  + LV AIRAI+AD +LT+ EKA KRQ L+SG      D
Sbjct: 61  SGVVV-PSAAPGTGISGPESSGSVLVAAIRAIQADVTLTEAEKAKKRQRLMSGGGDDGVD 120

Query: 121 DHDANEKRGDDVLDLFDERLKCSFCMQLPERPVTTPCGHNFCLKCFQKW-IGQGKNTCAK 180
           D +  +      L++F     CS C+QLPERPVTTPCGHNFCLKCF+KW +GQGK TC  
Sbjct: 121 DEEKKK------LEIF-----CSICIQLPERPVTTPCGHNFCLKCFEKWAVGQGKLTCMI 180

Query: 181 CRCVIPSKMASHPRINSTLVVAIRMAKMSKSIISGGSQKVYHVVHNLNRPDKAYTTDRAQ 240
           CR  IP  +A +PRIN  LV AIR+A ++K      + KV+H++ N +RPDKA+TT+RA 
Sbjct: 181 CRSKIPRHVAKNPRINLALVSAIRLANVTKCSGEATAAKVHHIIRNQDRPDKAFTTERAV 240

Query: 241 KKGKANAASGKIFVTIPSDHFGPILAENDPERNQGVLVGECWEDRLECRQWGAHFPHVAG 300
           K GKANAASGK FVTIP DHFGPI A ND  RNQGVLVGE WEDR ECRQWG HFPHVAG
Sbjct: 241 KTGKANAASGKFFVTIPRDHFGPIPAANDVTRNQGVLVGESWEDRQECRQWGVHFPHVAG 300

Query: 301 IAGQSNNGAQSVVLSGGYQDDEDHGEWFLYTGSGGRDLSGNKRTSKDQSFDQKFEKSNKA 360
           IAGQ+  GAQSV LSGGY DDEDHGEWFLYTGSGGRDLSGNKR +K QS DQ F+  N+A
Sbjct: 301 IAGQAAVGAQSVALSGGYDDDEDHGEWFLYTGSGGRDLSGNKRVNKIQSSDQAFKNMNEA 360

Query: 361 LQVSCLNGYPVRVVRSHKEKRSSYAPEKGLRYDGIYRIEKCWRKVGIQGF-KVCRYLFVR 420
           L++SC  GYPVRVVRS KEKRS+YAP +G+RYDG+YRIEKCW  VG+QG  K+CRYLFVR
Sbjct: 361 LRLSCKMGYPVRVVRSWKEKRSAYAPAEGVRYDGVYRIEKCWSNVGVQGLHKMCRYLFVR 420

Query: 421 CDNDPAPWTSDEHGDRPRPLPAIPELKKATDITERKKDPSWDFDEKDSRWKWSKPPPTSK 480
           CDN+PAPWTSDEHGDRPRPLP +PEL+ ATD+  RK+ PSW FDE + RWKW K PP S+
Sbjct: 421 CDNEPAPWTSDEHGDRPRPLPDVPELENATDLFVRKESPSWGFDEAEGRWKWMKSPPVSR 480

Query: 481 KSVETEDSTSGKKSRRRMRQSHNMNVRERLLKEFSCLICREVMNLPITTPCAHNFCKSCL 540
            +++TE+    +K  +R ++ +N  ++ RLLKEFSC ICR+V++LP+TTPCAHNFCK+CL
Sbjct: 481 MALDTEE----RKKNKRAKKGNNA-MKARLLKEFSCQICRKVLSLPVTTPCAHNFCKACL 540

Query: 541 EGAFAGKSFLRERNSGGRALRSRKNVMACPCCPTDISDFLQNLQVNRELLDVIESLKSKI 600
           E  FAG + LR+R++G R LR++KN+M CPCC TD+S+FLQN QVNRE++++IE+ K   
Sbjct: 541 EAKFAGITQLRDRSNGVRKLRAKKNIMTCPCCTTDLSEFLQNPQVNREMMEIIENFKKSE 600

Query: 601 EEADASEKPCEDEIEGEGEGEGEQEEEGKDGSNGNESS 637
           EEA+ +E     E E E E E   ++   D ++  ++S
Sbjct: 601 EEAEVAESSNISE-EEEEESEPPTKKIKMDNNSVGDTS 619

The following BLAST results are available for this feature:

BLAST of CmaCh11G000040.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYZ0	8.5e-250	67.67	E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana OX=3702 GN=ORTH2 P...	[more]
Q680I0	5.4e-220	61.51	E3 ubiquitin-protein ligase ORTHRUS 5 OS=Arabidopsis thaliana OX=3702 GN=ORTH5 P...	[more]
Q9FKA7	9.2e-220	60.50	E3 ubiquitin-protein ligase ORTHRUS 1 OS=Arabidopsis thaliana OX=3702 GN=ORTH1 P...	[more]
Q9C8E1	1.4e-215	59.87	Putative E3 ubiquitin-protein ligase ORTHRUS 4 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FVS2	2.7e-211	58.20	E3 ubiquitin-protein ligase ORTHRUS 3 OS=Arabidopsis thaliana OX=3702 GN=ORTH3 P...	[more]

BLAST of CmaCh11G000040.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G57820.1	6.1e-251	67.67	Zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G57820.2	1.4e-247	67.19	Zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G66050.1	3.8e-221	61.51	Zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G39550.1	6.5e-221	60.50	Zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G66040.1	9.8e-217	59.87	Zinc finger (C3HC4-type RING finger) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 584..604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 426..472
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 625..650
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 426..500
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 605..624
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 600..668
None	No IPR available	PANTHER	PTHR14140:SF42	FINGER PROTEIN, PUTATIVE-RELATED	coord: 1..638
None	No IPR available	CDD	cd16449	RING-HC	coord: 142..180 e-value: 2.85741E-9 score: 50.9289
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 507..595
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 133..189
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 14..61 e-value: 0.0015 score: 27.8
IPR003105	SRA-YDG	SMART	SM00466	G9a_1	coord: 265..422 e-value: 1.3E-74 score: 263.9
IPR003105	SRA-YDG	PFAM	PF02182	SAD_SRA	coord: 273..421 e-value: 1.0E-53 score: 181.2
IPR003105	SRA-YDG	PROSITE	PS51015	YDG	coord: 270..418 score: 52.301929
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 514..570 e-value: 8.7E-7 score: 38.6 coord: 142..180 e-value: 3.1E-6 score: 36.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 514..570 score: 10.453364
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 142..181 score: 11.604098
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 13..61 e-value: 9.6E-6 score: 27.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 91..209 e-value: 3.7E-20 score: 73.7 coord: 467..601 e-value: 4.2E-17 score: 63.9
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 142..180 e-value: 4.3E-8 score: 32.9
IPR036987	SRA-YDG superfamily	GENE3D	2.30.280.10		coord: 241..437 e-value: 1.1E-77 score: 262.0
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 514..549 e-value: 4.3E-8 score: 33.1
IPR045134	UHRF1/2-like	PANTHER	PTHR14140	E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED	coord: 1..638
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 15..60
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 529..538
IPR015947	PUA-like superfamily	SUPERFAMILY	88697	PUA domain-like	coord: 244..439
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 7..67

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh11G000040	CmaCh11G000040	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G000040.1:exon:1865	CmaCh11G000040.1:exon:1865	exon
CmaCh11G000040.1:exon:1866	CmaCh11G000040.1:exon:1866	exon
CmaCh11G000040.1:exon:1867	CmaCh11G000040.1:exon:1867	exon
CmaCh11G000040.1:exon:1868	CmaCh11G000040.1:exon:1868	exon
CmaCh11G000040.1:exon:1869	CmaCh11G000040.1:exon:1869	exon
CmaCh11G000040.1:exon:1870	CmaCh11G000040.1:exon:1870	exon
CmaCh11G000040.1:exon:1871	CmaCh11G000040.1:exon:1871	exon
CmaCh11G000040.1:exon:1872	CmaCh11G000040.1:exon:1872	exon
CmaCh11G000040.1:exon:1873	CmaCh11G000040.1:exon:1873	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G000040.1:five_prime_utr	CmaCh11G000040.1:five_prime_utr	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_2	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_3	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_4	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_5	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_6	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_7	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_8	CDS
CmaCh11G000040.1:cds	CmaCh11G000040.1:cds_9	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh11G000040.1:three_prime_utr	CmaCh11G000040.1:three_prime_utr	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh11G000040.1	CmaCh11G000040.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0010216	maintenance of DNA methylation
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0061630	ubiquitin protein ligase activity