CmaCh10G003950.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G003950.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Oxysterol-binding protein-related protein 4B-like
Location	Cma_Chr10: 1829849 .. 1830310 (-)
Sequence length	462
RNA-Seq Expression	CmaCh10G003950.1
Synteny	CmaCh10G003950.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGGAAACAAACGGCGGATATGTTCTGCCATTGGATAGTTTTCCGACGAGAAACTCATCTATGGGTCGTTCCTCTCGATCGTACTACTACAGAAGGACTTCTGAAGGGGTTCCGTTTCAGTGGGAGATGCTACCGGGGACCCCCAAGAATACTCCGCCGCTCGTGGAGCCGGTTCCACTGCGCATCCGCCCGCCGCCGGTTGTGGTCAGTCTTAGCCTGTTGAAGCCGGCCACGGTTCAGAATAAACAGCCGCAGTTTCGGTTACTTCGGCTGTGGAGGAAGCCGTCCAAGTCCATCAACAATTCTTGTCCGTTGGATGACCACCGTTCGAAATTTGGATCTCCATGCAAAGCAAAATCTCCTACGCCGGCGGCGGAATCTCCCGGGCACTGGCGGTTTGGATGCAGTCCGTGGAGGATCAACCCAATTAAAATAGCTAGTGGAAGGCGAGTTTAA

mRNA sequence

ATGAAGGAGGAAACAAACGGCGGATATGTTCTGCCATTGGATAGTTTTCCGACGAGAAACTCATCTATGGGTCGTTCCTCTCGATCGTACTACTACAGAAGGACTTCTGAAGGGGTTCCGTTTCAGTGGGAGATGCTACCGGGGACCCCCAAGAATACTCCGCCGCTCGTGGAGCCGGTTCCACTGCGCATCCGCCCGCCGCCGGTTGTGGTCAGTCTTAGCCTGTTGAAGCCGGCCACGGTTCAGAATAAACAGCCGCAGTTTCGGTTACTTCGGCTGTGGAGGAAGCCGTCCAAGTCCATCAACAATTCTTGTCCGTTGGATGACCACCGTTCGAAATTTGGATCTCCATGCAAAGCAAAATCTCCTACGCCGGCGGCGGAATCTCCCGGGCACTGGCGGTTTGGATGCAGTCCGTGGAGGATCAACCCAATTAAAATAGCTAGTGGAAGGCGAGTTTAA

Coding sequence (CDS)

ATGAAGGAGGAAACAAACGGCGGATATGTTCTGCCATTGGATAGTTTTCCGACGAGAAACTCATCTATGGGTCGTTCCTCTCGATCGTACTACTACAGAAGGACTTCTGAAGGGGTTCCGTTTCAGTGGGAGATGCTACCGGGGACCCCCAAGAATACTCCGCCGCTCGTGGAGCCGGTTCCACTGCGCATCCGCCCGCCGCCGGTTGTGGTCAGTCTTAGCCTGTTGAAGCCGGCCACGGTTCAGAATAAACAGCCGCAGTTTCGGTTACTTCGGCTGTGGAGGAAGCCGTCCAAGTCCATCAACAATTCTTGTCCGTTGGATGACCACCGTTCGAAATTTGGATCTCCATGCAAAGCAAAATCTCCTACGCCGGCGGCGGAATCTCCCGGGCACTGGCGGTTTGGATGCAGTCCGTGGAGGATCAACCCAATTAAAATAGCTAGTGGAAGGCGAGTTTAA

Protein sequence

MKEETNGGYVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPLRIRPPPVVVSLSLLKPATVQNKQPQFRLLRLWRKPSKSINNSCPLDDHRSKFGSPCKAKSPTPAAESPGHWRFGCSPWRINPIKIASGRRV

Homology

[Close]

BLAST of CmaCh10G003950.1 vs. ExPASy TrEMBL
Match: A0A0A0LUL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 101/173 (58.38%), Postives = 110/173 (63.58%), Query Frame = 0


Query: 1   MKEETNGG--YVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVE 60
           MKEE N    +VLPLD+FP+RNSSM RSSR +YYRRT+EGVPFQWEM PGTPKN PPL E
Sbjct: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 60

Query: 61  PVPLRIRPPPVVVSLSLLKPA-TVQNKQPQFRLLRLWRK--PSKSINNSCPLD----DHR 120
            +   I PPP V+SL L KP   VQNKQP F L   WRK    K   N CPLD    + R
Sbjct: 61  VILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNER 120

Query: 121 SKFG-----------SPCKAKSPTPAAESPGHWRFGCSPWRINPIKIASGRRV 154
            +F            S CK KS  PA  S GHWR GC PWRINPIKI  GRRV
Sbjct: 121 LRFDSCGSQCELMAESSCKGKS-APAGGSSGHWRLGCGPWRINPIKIGMGRRV 171

[Close]

BLAST of CmaCh10G003950.1 vs. ExPASy TrEMBL
Match: A0A6J1KZJ1 (uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.4e-35
Identity = 90/171 (52.63%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 3   EETNGGYVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPL 62
           E+ +  +VL LD+ P+R SS+G SSR YYYRRT+EGVPFQWEM PGTPK+ PP  E V L
Sbjct: 4   EKDDAEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKD-PPYTEAVTL 63

Query: 63  RIRPPPVVVSLSLLKPATVQNKQPQFRLLRLWRKPSKSINNSC---PLDDHRSKFG---- 122
            I PPP  +SL   KPA    KQ  F L R WRK SKS  +SC     +D R++FG    
Sbjct: 64  LITPPPAALSLRPPKPARTHGKQSLFLLFRPWRKQSKSKKHSCLSDEFEDGRTRFGSCGS 123

Query: 123 ------SPCKAKSPT-------PAAESPGHWRFGCSPWRINPIKIASGRRV 154
                 SPC+ KS +       PAAES  H R GC PWRINP++IA GRRV
Sbjct: 124 QCEFIQSPCEPKSSSSSAWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

[Close]

BLAST of CmaCh10G003950.1 vs. ExPASy TrEMBL
Match: A0A6J1EQV3 (uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC111436686 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.4e-35
Identity = 91/171 (53.22%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 3   EETNGGYVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPL 62
           E+ +  +VL LD+ P+R SS+G SSR YYYRRT+EGVPFQWEM PGTPK+ PP  E V L
Sbjct: 4   EKDDAEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKD-PPYTEAVTL 63

Query: 63  RIRPPPVVVSLSLLKPATVQNKQPQFRLLRLWRKPSKSINNSCPLD---DHRSKFG---- 122
            I PPP  +SL   KPA    KQ  F L R WRK SKS  +SC  D   D R++FG    
Sbjct: 64  LITPPPAALSLRPPKPARTHGKQSLFLLFRPWRKQSKSQKHSCLSDEFGDGRTRFGSCGS 123

Query: 123 ------SPCKAKSPT-------PAAESPGHWRFGCSPWRINPIKIASGRRV 154
                 SPC+ KS +       PAAES  H R GC PWRINP++IA GRRV
Sbjct: 124 QCEFIQSPCEPKSSSSSSWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

[Close]

BLAST of CmaCh10G003950.1 vs. ExPASy TrEMBL
Match: A0A5D3CJV8 (Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00380 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.0e-28
Identity = 81/151 (53.64%), Postives = 90/151 (59.60%), Query Frame = 0


Query: 23  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPLRIRPPPVVVSLSLLKPA-TV 82
           M RSSR +YYRRT+EGVPFQWEM PGTPK+ PPL E +P  I PPP V+SL   KP   V
Sbjct: 1   MSRSSR-FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVV 60

Query: 83  QNKQPQFRLLRLWRK----PSKSINNSCPLD----DHRSKFG-----------SPCKAKS 142
           QNKQ  F L   WRK      K   N CPLD    + R +F            S CK +S
Sbjct: 61  QNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRS 120

Query: 143 PTPAAESPGHWRFGCSPWRINPIKIASGRRV 154
            +P  ES G WR GC PWRINPIKI  GRRV
Sbjct: 121 -SPVGESSGQWRLGCGPWRINPIKIGMGRRV 149

[Close]

BLAST of CmaCh10G003950.1 vs. ExPASy TrEMBL
Match: A0A7J9MS94 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_010158 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-11
Identity = 56/150 (37.33%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 18  TRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPLRIRPPPVVVSLSLLK 77
           +R+SS G SSR YYY R+SEG+PF WEM PGTPK   P  E V   I PPP ++SL L K
Sbjct: 24  SRDSSTGCSSRIYYY-RSSEGIPFNWEMQPGTPKE--PRKEDVLPPISPPPALLSLGLPK 83

Query: 78  P---ATVQNKQPQFRLLRLWRKPSK---------------SINNSCPLDDHRSKFGSPCK 137
           P      +NK  + ++ + W+   K               S   +C  DD R   GSPC 
Sbjct: 84  PRIDVVEENKVSKLKVFKFWKHGKKXDXKKKIDDHQSDKYSNYETCSSDDDREFVGSPCV 143

Query: 138 A----------KSPTPAAESPGHWRFGCSP 140
           +           S TP+ +S  +  +GC P
Sbjct: 144 SSSSSSSFSFGSSSTPSRDSSFNRHYGCGP 170

[Close]

BLAST of CmaCh10G003950.1 vs. NCBI nr
Match: KAG7023386.1 (hypothetical protein SDJN02_14411, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.7 bits (735), Expect = 5.8e-74
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MKEETNGGYVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPV 60
           MKEETNGG+VLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPV
Sbjct: 1   MKEETNGGFVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPV 60

Query: 61  PLRIRPPPVVVSLSLLKPATVQNKQPQFRLLRLWRKPSKSINNSCPLDDHRSKFGSPCKA 120
           P+RIRPPPVVVSLSLLKPATVQNKQPQF L R WRK SKS NNS PLDDHRSKFGSPCKA
Sbjct: 61  PVRIRPPPVVVSLSLLKPATVQNKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKA 120

Query: 121 KSPTPAAESPGHWRFGCSPWRINPIKI 148
           KSPTPAAESPGHWRFGC PWRINPIKI
Sbjct: 121 KSPTPAAESPGHWRFGCRPWRINPIKI 147

[Close]

BLAST of CmaCh10G003950.1 vs. NCBI nr
Match: KAG6589706.1 (hypothetical protein SDJN03_15129, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.6 bits (649), Expect = 5.4e-64
Identity = 122/131 (93.13%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 23  MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPLRIRPPPVVVSLSLLKPATVQ 82
           MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVP+RIRPPPVVVSLSLLKPATVQ
Sbjct: 1   MGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPVRIRPPPVVVSLSLLKPATVQ 60

Query: 83  NKQPQFRLLRLWRKPSKSINNSCPLDDHRSKFGSPCKAKSPTPAAESPGHWRFGCSPWRI 142
           NKQPQF L R WRK SKS NNS PLDDHRSKFGSPCKAKSPTPAAESPGHWRFGCSPWRI
Sbjct: 61  NKQPQFLLFRPWRKQSKSNNNSRPLDDHRSKFGSPCKAKSPTPAAESPGHWRFGCSPWRI 120

Query: 143 NPIKIASGRRV 154
           NPIKI +GRRV
Sbjct: 121 NPIKIGTGRRV 131

[Close]

BLAST of CmaCh10G003950.1 vs. NCBI nr
Match: XP_004146363.1 (uncharacterized protein LOC101210202 [Cucumis sativus] >KGN65458.1 hypothetical protein Csa_019691 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 2.7e-39
Identity = 101/173 (58.38%), Postives = 110/173 (63.58%), Query Frame = 0


Query: 1   MKEETNGG--YVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVE 60
           MKEE N    +VLPLD+FP+RNSSM RSSR +YYRRT+EGVPFQWEM PGTPKN PPL E
Sbjct: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 60

Query: 61  PVPLRIRPPPVVVSLSLLKPA-TVQNKQPQFRLLRLWRK--PSKSINNSCPLD----DHR 120
            +   I PPP V+SL L KP   VQNKQP F L   WRK    K   N CPLD    + R
Sbjct: 61  VILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNER 120

Query: 121 SKFG-----------SPCKAKSPTPAAESPGHWRFGCSPWRINPIKIASGRRV 154
            +F            S CK KS  PA  S GHWR GC PWRINPIKI  GRRV
Sbjct: 121 LRFDSCGSQCELMAESSCKGKS-APAGGSSGHWRLGCGPWRINPIKIGMGRRV 171

[Close]

BLAST of CmaCh10G003950.1 vs. NCBI nr
Match: XP_023530969.1 (uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-35
Identity = 92/172 (53.49%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 3   EETNGGYVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPL 62
           E+ +  +VLPLD+ P+R SS+G SSR YYYRRT+EGVPFQWEM PGTPK+  P  E V L
Sbjct: 4   EKDDAEFVLPLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKD-QPYTEAVTL 63

Query: 63  RIRPPPVVVSLSLLKPATVQNKQPQFRLLRLWRKPSKSINNSC---PLDDHRSKFG---- 122
            I PPP  +SL   KPA  Q KQ  F L R WRK SKS  +SC     +D RS+FG    
Sbjct: 64  LITPPPAALSLRPPKPARTQGKQSLFLLFRPWRKQSKSKKHSCLSDEFEDGRSRFGSCGS 123

Query: 123 ------SPCKAKSPT--------PAAESPGHWRFGCSPWRINPIKIASGRRV 154
                 SPC+ KS +        PAAES  H R GC PWRINP++IA GRRV
Sbjct: 124 QCEFIQSPCQPKSSSSSSSWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 174

[Close]

BLAST of CmaCh10G003950.1 vs. NCBI nr
Match: XP_022930189.1 (uncharacterized protein LOC111436686 [Cucurbita moschata])

HSP 1 Score: 157.5 bits (397), Expect = 9.0e-35
Identity = 91/171 (53.22%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 3   EETNGGYVLPLDSFPTRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPL 62
           E+ +  +VL LD+ P+R SS+G SSR YYYRRT+EGVPFQWEM PGTPK+ PP  E V L
Sbjct: 4   EKDDAEFVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKD-PPYTEAVTL 63

Query: 63  RIRPPPVVVSLSLLKPATVQNKQPQFRLLRLWRKPSKSINNSCPLD---DHRSKFG---- 122
            I PPP  +SL   KPA    KQ  F L R WRK SKS  +SC  D   D R++FG    
Sbjct: 64  LITPPPAALSLRPPKPARTHGKQSLFLLFRPWRKQSKSQKHSCLSDEFGDGRTRFGSCGS 123

Query: 123 ------SPCKAKSPT-------PAAESPGHWRFGCSPWRINPIKIASGRRV 154
                 SPC+ KS +       PAAES  H R GC PWRINP++IA GRRV
Sbjct: 124 QCEFIQSPCEPKSSSSSSWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

[Close]

BLAST of CmaCh10G003950.1 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 4.5e-08
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 18 TRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPLRIRPPPVVVSLSLLK 77
          +RNSS+G     YY  R  EGVPF+WEM PGTP NT P  E VP  + PPP ++SL L K
Sbjct: 13 SRNSSVG-----YYDERMPEGVPFEWEMQPGTPINTQPR-EVVP-PLSPPPAMLSLGLPK 67

Query: 78 PA 80
          P+
Sbjct: 73 PS 67

[Close]

BLAST of CmaCh10G003950.1 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 55.5 bits (132), Expect = 4.5e-08
Identity = 34/62 (54.84%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 18 TRNSSMGRSSRSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPLRIRPPPVVVSLSLLK 77
          +RNSS+G     YY  R  EGVPF+WEM PGTP NT P  E VP  + PPP ++SL L K
Sbjct: 13 SRNSSVG-----YYDERMPEGVPFEWEMQPGTPINTQPR-EVVP-PLSPPPAMLSLGLPK 67

Query: 78 PA 80
          P+
Sbjct: 73 PS 67

[Close]

BLAST of CmaCh10G003950.1 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 41.2 bits (95), Expect = 8.8e-04
Identity = 38/112 (33.93%), Postives = 48/112 (42.86%), Query Frame = 0


Query: 28  RSYYYRRTSEGVPFQWEMLPGTPKNTPPLVEPVPLRIRPPPVVVSLSLLKPATVQNKQPQ 87
           RS YY   S  +PF WE  PGTPKN       +PL + PPP   S  +L     Q+K   
Sbjct: 15  RSSYYGGAS--IPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSK--- 74

Query: 88  FRLLRLWRKPSKSINNSCPLDDHRSKFGSPCKAKSPTPAAESPGHWRFGCSP 140
                +  K SK ++ S   D  RS  GS   A S    + +     F  SP
Sbjct: 75  -----VRSKLSKFLSFSMFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSP 116

The following BLAST results are available for this feature:

BLAST of CmaCh10G003950.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G003950.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUL8	1.3e-39	58.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1	[more]
A0A6J1KZJ1	4.4e-35	52.63	uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680...	[more]
A0A6J1EQV3	4.4e-35	53.22	uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC1114366...	[more]
A0A5D3CJV8	1.0e-28	53.64	Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX...	[more]
A0A7J9MS94	2.0e-11	37.33	Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_010158 PE=4...	[more]

BLAST of CmaCh10G003950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023386.1	5.8e-74	93.88	hypothetical protein SDJN02_14411, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589706.1	5.4e-64	93.13	hypothetical protein SDJN03_15129, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004146363.1	2.7e-39	58.38	uncharacterized protein LOC101210202 [Cucumis sativus] >KGN65458.1 hypothetical ...	[more]
XP_023530969.1	1.4e-35	53.49	uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]	[more]
XP_022930189.1	9.0e-35	53.22	uncharacterized protein LOC111436686 [Cucurbita moschata]	[more]

BLAST of CmaCh10G003950.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	4.5e-08	54.84	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	4.5e-08	54.84	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT3G56260.2	8.8e-04	33.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 16..111
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 16..111

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh10G003950	CmaCh10G003950	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G003950.1:exon:336	CmaCh10G003950.1:exon:336	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh10G003950.1:cds	CmaCh10G003950.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh10G003950.1	CmaCh10G003950.1-protein	polypeptide