Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCTAACATTTTCGAAGGAGCAAAAAAAAAGAAAAAAAAAAAAGACAACACTAAAATATAGTTCTCTATTTCTTCCTCTCTCCGCTGAAACTAGTGTACGAAGCGCTTGGCGGGTGAGGGGGCTCCCGCAATTTTTGTTTGTTTGCTTTCGTTTCTTCTAGTTTGTTTTGTATACTGAATCTGATTGAATTTGATTGTGGAGGTATTTCTTGATTTTCCGATCTCTGTTTCTTTGGAGTTTTTTTTTTTTTTTTTTTCGTTTGTATGATCTGTTTGTTTGTCAAGAATTTGTGGAGGCATCGTTCTTCGGTCGCTGTTAGTTTTGATTTTGATTCTGACTTGATTTGGAGGGAGTTTCCGAAGTATGTATGGACGTATGTTGTATGGTGTATTTTCATTTGTTTGAATCTTGTGCCTGCTCTGAAACCTAAACGACAGTTTGGAAGATGGAGGGATGGTGTTGTGAGAAATGAACATTTCGATGTGTTTTAGTTGGAAGTTCGGAACCTATTGGTTTTGTATTATTTTTCTTGATAAAATGAATTGGGACGGACGGATACCGTTTTACTCCGATTAGTCTCTGACAATTAGATTGATACTTTCAGTTTTTCCCCCTTCCCCTTGGAAATGATGTGAACTCTGCCTAAAAATGATTTTTCTGTGAGGGGGGTGACCTTTTGATGATTCATGGTTTTTCTCTAATTCCAGATTGAAAATGGGGATATATCTGAGCTCCCCCAAAACAGAAAAGGCCTCGGATGATGGTGAGAACGAAAGACTTCGGTACGGCCTTTCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTGTGAGTTTTCCTTCTATTGTATCCGTTCCCTTTGTCGTTGAAGTCTGTGCCATGTTATTGTACTCAGTTGTTCATCATGCACTCTATTGCATACTGCCATCCATTCAAATTAATAATATCATAGGATGAACCTGCTTTGGACTATATTATCTGTAGGAAGTTGCAATGTATGCATTTTGAAAACTTCTGAATAGAATATTGCTATTCGGTTTATCTTTTTGTAGTGGTACTGTATGTGCTGTCACCTGTGTTCTTTATAAGCACTCCTCTTGGTGCATTGAAACAGAGAGTTTGCATCATAAGATCTACAATGCCATGAAAATTTGGGACTTTAGTTTTATGTTTAACAACTCTTGGAATTGGGTGGAGCAAAATGATCATTAGTCTTGCACTTTTAATAATTTCCAATCATTTGGGAGGCTTCTGTCTGATTCGTTACTGGACAGTGCCTGCATTTTATTTGGAAATCTACTACCTACTCAAACTCACTGTAGCTTTCTGTGGCCTGTGGAGATGGTTCATCTGATATTGAGATTGTTGTTAAGTTTGGTAGTGGAACTATCTTTTGAAGTCTCCGAAACTGATCTGCATTCTGCACATTTTAAAAGGAGCAATATTTGAGTTCTGTTATATTGTGTGTTACATATGGATTGTTCCGATCTTATCCTACTTAAGTTTCAGCATGCAGCCTGTCTAGACTTGGACACATCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTTAGCTTCTGTCTTTTGAGCAGCATCTCTCTCTATGTTACCATCAATTATTTGTTGATTGATATGTACTAGCACTTCTGTGATGCCTTTTTTTTTTCTCCCCCCTACAAATTCTATTAAAATGCAGGTAAAGCAGTTTCTAAGTTCTGTGCCAAGTACCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCATTACAGAAGTCCTTTCTCAGGTTATTAGTCCGCTGGCTTTGTTTTAGTCTACCCAGTATTTTAGATGGTTATAGTCATTGTCTTGGATTAAGTAGGGGGAAATTTCTTTATTTTATGGATCACGATGAAATAACTAGTGCATCATGTTTGGTTGGGCTTTCTACTGTCATAGTCGTTGACAGTTTTATAGTTGTGGATTTGATTTGATGCACTACTTATTTGTGATCATTTGGTAACAAAGATTATTAAATTGAAATAAATAGGGGCACAGTCTCCAAATCCTGATATGATGTGGTTCTTGCTTCCCCTCTTCCACCCTTGTTGGTTGAAAGACCCGATTTTGTCAAAAATGCAAAGCCTGCCTTCTTATTTTGACAATCTTAAATGGTGCAGAATGGATGAGATGATGCTTGGACAGAGGGGATGGAGAGAGTTAGCTGTTTTGGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGAGTAGCGAAGCTAACAACCAAGTGGACAGTTGGTCTGCGGAGGAGGTATTTTTATGCACAATTCCCGGTTGCTATGGTGGATTTACTTTCCTTTTCTGTTTTGAGGTGGACATGCGTTTGTAGAAGAGGTAGTCCCCCTCTTTCCTCTGTGTCCAGTTGGATGCAATTTGCAGTTTACTAACTGTATTTCTTTAGCATTGATTTGTAGTAACTTTAGTTAGTTTTGCGTTAAATTTGCTATGAAACAATTGTACATATATTGTTGGGCATGGATTCAATTAAAGTGAGGAGGTGATATTGCTAACTAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATCATTCGAAATAACCAACTTGTGGTAGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGCCAGGTATTTCTATCAGAAAGACATCTCTCATTTGATTTACATGTGCTTAACAGTGACATATATCTTCCTGATTAGGAGTCTGAATACAGTAACCAATTGAAGTATTATCATAAAACCAATTAGAGGTTTTGAAAAGTAATAAGAAGTCTGAAGATATAACCGATTGGATGTGTAAAGATGTGATCGTTAGCCTATCCTTATATATTTCAACTATTTTTGTTCTCATTTCCTTTGCCCCAACTTATTTCGTTTTACGTTATCTGAATATTGGATTTGTTAGATGAATAGCCGGTTAAACTTCTATGTCAGTTGTTTTAATGTCGTTGAATTCGGAGAGAGGTGAGTTGGGATACGCAGACTATTGGATATGCTAATTGGAGAGATGTTGACGAACTCTCAATTTCTGTTCCACTGCTTCCTAACCAGATTGCTCCGAAATTTCTTGCCGGAAATACAAGTAATTTAACTCTGATTAGTGAATTTGCATAACAGGCTGTGAGTGAAGAATCATTAAATGGATATGAATATAACAATTCTGATAGTATTACCGAAATATGATTCCCTTAATGTCATGAAAAGCACCACAAATTAGGCAGAATAATTTGAATAATTGAGATATTTCATGGGCGTCTAGTGCTCCACCTAACATCTTCTTCACAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCACGAGCTATAGGTGCATGCTATCTATGTCTTAGTTCTAAGATTGAAGTATAATTTGGGGAGAGCATGAGCCTAGGCTATGGGGGCATACTTTCACAGTCGTTCTAAATTTGGAATATAAATTGAGAATCTCCTTCCGTGGCTATTATTTATTTGGAACCTTGTTTTTACAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACAGCCAACCCAGATATAACAACTGTATGTGTTTAACGGCTTCAATATTTCCGCTAGGGTGTTAAATATTTATATGGTTCTTTTTAATTATTCTTATGCAGCAATTTTCTTATTCAAGATGGACTCAGCAGATAATTTTTTTCCTTATTCTTATAGTTTAACTGATACCATTTTGGAAGTCAATTATTAAAATTTTGGCAATTTACATGATTGACATTAGTTTTGGTGGTAGTATATGATTTACTGAAGACTGAAGCTAATTATTCTTGGAAGGATTTCATTATTTTCATTTTAATCCCTTTCATTCCTTTCTCTTGATCTCTCTCTCTCTCTCTTTTTTTTCCTTTTCGTAATTAGGTTGAGCTTTGTGAGGATGACGAGTTTCTTGTAATTGCCTGTGATGGGATCTGGTAAGTTTGAGAATATGTGCTTTTATGGGCTAAATAATCCCTATAAAGTTCGAACCATTTAGCCCTTTGAATTATATCGCACAAGCATGTACCCGATCACTATCTTCTGTAATGATGTGATGGAGCAATTTAATTGATAAAGTCTAATTGACTTGAAATAATTTATGCTTGGGATTTTAATAGTCCCACTTCTACTTGTACTAGCAGGAAAATTCAGCATTGTAGTTCTGAGACTTTCTAAACTGATAACATTGATGTAGTATAGAAATATTGTTCTTTCTATGGAAGCAACCTATTCAATGAGTATAATGGTATTATTAGTATGTGCATTTATTTGGTTTTATTGACTTCAAAAAAATGTAAATCATTGACCATCTCTCTCTGCACAGGGATTGCATGTCTAGCCAACAACTGGTCGACTACATTGGAGATCAACTAAAAACAGTAAGTTTGTGTTAAGACTTTTTATTAGTGGTTAAATGATAGGATCATACCGAGATTAATCGAGGTGCATGTAAGCTAGCATAGACACTATATACTGATTCCAATTTGTGTAAATATGCAGGAAAGCAAACTCTCAGTTATTTGCGAGAGAGTATTTGACAGATGCTTGGCACCTTCAGCTGGTGGTGAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAGAAACCCTTCAACCCAAATGCTGCTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAACTTAGATCTGATGATCCAAACGAAGGCTCTTCTAAAACCGAATAG
mRNA sequence
GGTCTAACATTTTCGAAGGAGCAAAAAAAAAGAAAAAAAAAAAAGACAACACTAAAATATAGTTCTCTATTTCTTCCTCTCTCCGCTGAAACTAGTGTACGAAGCGCTTGGCGGATTGAAAATGGGGATATATCTGAGCTCCCCCAAAACAGAAAAGGCCTCGGATGATGGTGAGAACGAAAGACTTCGGTACGGCCTTTCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGACTTGGACACATCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTTCTAAGTTCTGTGCCAAGTACCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCATTACAGAAGTCCTTTCTCAGAATGGATGAGATGATGCTTGGACAGAGGGGATGGAGAGAGTTAGCTGTTTTGGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGAGTAGCGAAGCTAACAACCAAGTGGACAGTTGGTCTGCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATCATTCGAAATAACCAACTTGTGGTAGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCACGAGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACAGCCAACCCAGATATAACAACTGTTGAGCTTTGTGAGGATGACGAGTTTCTTGTAATTGCCTGTGATGGGATCTGGGATTGCATGTCTAGCCAACAACTGGTCGACTACATTGGAGATCAACTAAAAACAGAAAGCAAACTCTCAGTTATTTGCGAGAGAGTATTTGACAGATGCTTGGCACCTTCAGCTGGTGGTGAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAGAAACCCTTCAACCCAAATGCTGCTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAACTTAGATCTGATGATCCAAACGAAGGCTCTTCTAAAACCGAATAG
Coding sequence (CDS)
ATGGGGATATATCTGAGCTCCCCCAAAACAGAAAAGGCCTCGGATGATGGTGAGAACGAAAGACTTCGGTACGGCCTTTCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTGTCTAGACTTGGACACATCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTTCTAAGTTCTGTGCCAAGTACCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCATTACAGAAGTCCTTTCTCAGAATGGATGAGATGATGCTTGGACAGAGGGGATGGAGAGAGTTAGCTGTTTTGGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGAGTAGCGAAGCTAACAACCAAGTGGACAGTTGGTCTGCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCTTGTGTTGCAATCATTCGAAATAACCAACTTGTGGTAGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGCCAGGCATATAATCTATCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCTGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCACGAGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACAGCCAACCCAGATATAACAACTGTTGAGCTTTGTGAGGATGACGAGTTTCTTGTAATTGCCTGTGATGGGATCTGGGATTGCATGTCTAGCCAACAACTGGTCGACTACATTGGAGATCAACTAAAAACAGAAAGCAAACTCTCAGTTATTTGCGAGAGAGTATTTGACAGATGCTTGGCACCTTCAGCTGGTGGTGAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAGAAACCCTTCAACCCAAATGCTGCTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAACTTAGATCTGATGATCCAAACGAAGGCTCTTCTAAAACCGAATAG
Protein sequence
MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDKISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVICERVFDRCLAPSAGGEGCDNMTMILVQFKKPFNPNAASAEELPSSSNQLRSDDPNEGSSKTE
Homology
BLAST of CmaCh08G005880.1 vs. ExPASy Swiss-Prot
Match:
Q9SZ53 (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana OX=3702 GN=At4g31860 PE=2 SV=1)
HSP 1 Score: 557.4 bits (1435), Expect = 1.2e-157
Identity = 268/357 (75.07%), Postives = 312/357 (87.39%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MGIYLS+PKT+K S+DGEN +LRYGLSSMQGWRA+MEDAHAA LDLD +TSF GVYDGHG
Sbjct: 1 MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLDDNTSFLGVYDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
GK VSKFCAKYLH+QVL E+Y AGD+GTSLQK+F RMDEMM GQRGWRELAVLGDK++K
Sbjct: 61 GKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDKINK 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
SGMIEG IWSP+S ++ N+ D+W+ EEGPHSDF GPN+GSTACVA++R+ QL VANAGD
Sbjct: 121 FSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCVISRK QAYNLS+DHKPDLE EK+RILKAGGFI GRVNGSLNL+RAIGDMEFKQNK
Sbjct: 181 SRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNK 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVI 300
+P+EKQIVTA+PD+ TVELC+DD+FLV+ACDGIWDCM+SQQLVD+I +QL +E+KLSV+
Sbjct: 241 FLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVV 300
Query: 301 CERVFDRCLAP-SAGGEGCDNMTMILVQFKKP------FNPNAASAE---ELPSSSN 348
CE+V DRCLAP ++GGEGCDNMTMILV+FK P P A+ AE + PSSSN
Sbjct: 301 CEKVLDRCLAPNTSGGEGCDNMTMILVRFKNPTPSETELKPEASQAEGNHDEPSSSN 357
BLAST of CmaCh08G005880.1 vs. ExPASy Swiss-Prot
Match:
O81716 (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana OX=3702 GN=PPC4-2 PE=1 SV=1)
HSP 1 Score: 549.7 bits (1415), Expect = 2.5e-155
Identity = 262/359 (72.98%), Postives = 310/359 (86.35%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MG YLSSPKTEK S+DGEN++LR+GLSSMQGWRATMEDAHAA LDLD TSFFGVYDGHG
Sbjct: 1 MGTYLSSPKTEKLSEDGENDKLRFGLSSMQGWRATMEDAHAAILDLDDKTSFFGVYDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
GK V+KFCAKYLH+QV+ +E+Y GD+ TSL+++F RMD+MM GQRGWRELAVLGDKM+K
Sbjct: 61 GKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMDDMMQGQRGWRELAVLGDKMNK 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
SGMIEGFIWSP+S + NNQ DSW E+GPHSDF GP +G TACVA+I++ +L VANAGD
Sbjct: 121 FSGMIEGFIWSPRSGDTNNQPDSWPLEDGPHSDFTGPTSGCTACVALIKDKKLFVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCVISRK QAYNLSKDHKPDLEVEK+RILKAGGFI GR+NGSLNL RAIGDMEFKQNK
Sbjct: 181 SRCVISRKSQAYNLSKDHKPDLEVEKERILKAGGFIHAGRINGSLNLTRAIGDMEFKQNK 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVI 300
+P+EKQ+VTA+PDI T++LC+DD+FLV+ACDGIWDCMSSQ+LVD+I +QLK+E+KLS +
Sbjct: 241 FLPSEKQMVTADPDINTIDLCDDDDFLVVACDGIWDCMSSQELVDFIHEQLKSETKLSTV 300
Query: 301 CERVFDRCLAP-SAGGEGCDNMTMILVQFKKPFNPNAASAEELPSSSNQLRSDDPNEGS 359
CE+V DRCLAP +A GEGCDNMT+ILVQFKKP NP+ E+ S + D+P+ S
Sbjct: 301 CEKVVDRCLAPDTATGEGCDNMTIILVQFKKP-NPSETEPED---SKPEPSEDEPSSSS 355
BLAST of CmaCh08G005880.1 vs. ExPASy Swiss-Prot
Match:
Q6ETK3 (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0180000 PE=2 SV=1)
HSP 1 Score: 542.0 bits (1395), Expect = 5.3e-153
Identity = 252/336 (75.00%), Postives = 292/336 (86.90%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MGIYLS+PKT+K S+DGEN++L+ GLSSMQGWRA MEDAH+A L+LD TSFFGV+DGHG
Sbjct: 1 MGIYLSTPKTDKFSEDGENDKLKLGLSSMQGWRANMEDAHSALLNLDNETSFFGVFDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
G+ V+KFCAKYLH QVL+ E+Y AGDLGT++ ++F RMDEMM GQRGWREL+ LGDK++K
Sbjct: 61 GRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMMRGQRGWRELSALGDKINK 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
I GMIEG IWSP+ S++NN D WS EEGPHSDF GP G TACVA+IRNNQLVVANAGD
Sbjct: 121 IGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCGCTACVALIRNNQLVVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCVISR GQAYNLS+DHKP+LE E+DRI+KAGGFI +GR+NGSLNL RAIGDMEFKQNK
Sbjct: 181 SRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMGRINGSLNLTRAIGDMEFKQNK 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVI 300
+P EKQIVTANPDI VELC+DD+FLV+ACDGIWDCMSSQQLVD+I + ++ ES LS +
Sbjct: 241 FLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHIQKESSLSAV 300
Query: 301 CERVFDRCLAPSA-GGEGCDNMTMILVQFKKPFNPN 336
CERV DRCLAPS GGEGCDNMTM+LVQFKKP N
Sbjct: 301 CERVLDRCLAPSTIGGEGCDNMTMVLVQFKKPITQN 336
BLAST of CmaCh08G005880.1 vs. ExPASy Swiss-Prot
Match:
Q67UP9 (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0651600 PE=2 SV=1)
HSP 1 Score: 541.6 bits (1394), Expect = 6.9e-153
Identity = 251/344 (72.97%), Postives = 302/344 (87.79%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MG+YLS+PKTEK S+DGEN++L++GLSSMQGWRATMEDAH+A LD+D TSFFGV+DGHG
Sbjct: 1 MGVYLSTPKTEKLSEDGENDKLKFGLSSMQGWRATMEDAHSALLDIDNDTSFFGVFDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
G+ V+KFCAKYLHR+VL+ E+Y AGDLG + K+F RMDEMM GQRGWREL LGDK+++
Sbjct: 61 GRVVAKFCAKYLHREVLRSEAYSAGDLGNAAHKAFFRMDEMMRGQRGWRELQALGDKINQ 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
ISGMIEG IWSP+ S++N+Q D W+ EEGPHSDF GP GSTACVAI+RN+QLVVANAGD
Sbjct: 121 ISGMIEGLIWSPRGSDSNDQHDDWAFEEGPHSDFAGPTCGSTACVAIVRNSQLVVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCVISR GQAYNLS+DHKP+LE E++RILKAGG+I++GRVNG++NL+RAIGD+EFKQNK
Sbjct: 181 SRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMGRVNGTINLSRAIGDIEFKQNK 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVI 300
+ +KQ++TANPDI TVELC+DD+FLV+ACDGIWDCMSSQQLVD+I + + TES LS +
Sbjct: 241 FLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWDCMSSQQLVDFIHEHINTESSLSAV 300
Query: 301 CERVFDRCLAPSA-GGEGCDNMTMILVQFKKPF--NPNAASAEE 342
CERV DRCLAPS GGEGCDNMTMILVQFKKP N N + AE+
Sbjct: 301 CERVLDRCLAPSTLGGEGCDNMTMILVQFKKPISQNKNVSPAEQ 344
BLAST of CmaCh08G005880.1 vs. ExPASy Swiss-Prot
Match:
Q653S3 (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0558000 PE=2 SV=2)
HSP 1 Score: 511.1 bits (1315), Expect = 1.0e-143
Identity = 243/359 (67.69%), Postives = 297/359 (82.73%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MG+YLS+PKTEK S +G N+RLRYGL+SMQGWR TMEDAH A LD TSFFGVYDGHG
Sbjct: 1 MGVYLSTPKTEKYSGEGGNDRLRYGLASMQGWRTTMEDAHTALPRLDECTSFFGVYDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
GKAVSKFCAK+LH QVLK+E+Y +GDL TS+ KSF RMDEMM GQRGWRELA LGDK K
Sbjct: 61 GKAVSKFCAKHLHLQVLKNEAYSSGDLATSVLKSFFRMDEMMKGQRGWRELAELGDKGQK 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
+GM+EG IWSPK E++ D+W+ EEGPHS F GP +GSTACVAIIRN++L+VANAGD
Sbjct: 121 FTGMLEGIIWSPKPGESDKPEDTWT-EEGPHSHFPGPTSGSTACVAIIRNDELIVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCV+SRKG+AY+LSKDHKPDL+ EK+RIL AGGFI GRVNGSLNLARAIGDME KQN+
Sbjct: 181 SRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIVAGRVNGSLNLARAIGDMELKQNE 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVI 300
+PAE+QIVTA P++ TV+L EDDEF+V+ACDGIWDCMSSQ++VD++ ++ TE LS +
Sbjct: 241 FLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFVHKEMNTEDSLSAV 300
Query: 301 CERVFDRCLAPSAGGEGCDNMTMILVQFKKPFNPNAASAEELPSSSNQLRSDDPNEGSS 360
CE++ D CLAP +GG+GCDNMT+I+V+FKKP A S+ SS ++R ++ ++G S
Sbjct: 301 CEKLLDHCLAPVSGGDGCDNMTVIIVKFKKPSKSAATSSTNQSVSSEEMRPNELDDGPS 358
BLAST of CmaCh08G005880.1 vs. TAIR 10
Match:
AT4G31860.1 (Protein phosphatase 2C family protein )
HSP 1 Score: 557.4 bits (1435), Expect = 8.6e-159
Identity = 268/357 (75.07%), Postives = 312/357 (87.39%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MGIYLS+PKT+K S+DGEN +LRYGLSSMQGWRA+MEDAHAA LDLD +TSF GVYDGHG
Sbjct: 1 MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLDDNTSFLGVYDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
GK VSKFCAKYLH+QVL E+Y AGD+GTSLQK+F RMDEMM GQRGWRELAVLGDK++K
Sbjct: 61 GKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDKINK 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
SGMIEG IWSP+S ++ N+ D+W+ EEGPHSDF GPN+GSTACVA++R+ QL VANAGD
Sbjct: 121 FSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCVISRK QAYNLS+DHKPDLE EK+RILKAGGFI GRVNGSLNL+RAIGDMEFKQNK
Sbjct: 181 SRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNK 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVI 300
+P+EKQIVTA+PD+ TVELC+DD+FLV+ACDGIWDCM+SQQLVD+I +QL +E+KLSV+
Sbjct: 241 FLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIWDCMTSQQLVDFIHEQLNSETKLSVV 300
Query: 301 CERVFDRCLAP-SAGGEGCDNMTMILVQFKKP------FNPNAASAE---ELPSSSN 348
CE+V DRCLAP ++GGEGCDNMTMILV+FK P P A+ AE + PSSSN
Sbjct: 301 CEKVLDRCLAPNTSGGEGCDNMTMILVRFKNPTPSETELKPEASQAEGNHDEPSSSN 357
BLAST of CmaCh08G005880.1 vs. TAIR 10
Match:
AT2G25070.1 (Protein phosphatase 2C family protein )
HSP 1 Score: 549.7 bits (1415), Expect = 1.8e-156
Identity = 262/359 (72.98%), Postives = 310/359 (86.35%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MG YLSSPKTEK S+DGEN++LR+GLSSMQGWRATMEDAHAA LDLD TSFFGVYDGHG
Sbjct: 1 MGTYLSSPKTEKLSEDGENDKLRFGLSSMQGWRATMEDAHAAILDLDDKTSFFGVYDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
GK V+KFCAKYLH+QV+ +E+Y GD+ TSL+++F RMD+MM GQRGWRELAVLGDKM+K
Sbjct: 61 GKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMDDMMQGQRGWRELAVLGDKMNK 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
SGMIEGFIWSP+S + NNQ DSW E+GPHSDF GP +G TACVA+I++ +L VANAGD
Sbjct: 121 FSGMIEGFIWSPRSGDTNNQPDSWPLEDGPHSDFTGPTSGCTACVALIKDKKLFVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCVISRK QAYNLSKDHKPDLEVEK+RILKAGGFI GR+NGSLNL RAIGDMEFKQNK
Sbjct: 181 SRCVISRKSQAYNLSKDHKPDLEVEKERILKAGGFIHAGRINGSLNLTRAIGDMEFKQNK 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVI 300
+P+EKQ+VTA+PDI T++LC+DD+FLV+ACDGIWDCMSSQ+LVD+I +QLK+E+KLS +
Sbjct: 241 FLPSEKQMVTADPDINTIDLCDDDDFLVVACDGIWDCMSSQELVDFIHEQLKSETKLSTV 300
Query: 301 CERVFDRCLAP-SAGGEGCDNMTMILVQFKKPFNPNAASAEELPSSSNQLRSDDPNEGS 359
CE+V DRCLAP +A GEGCDNMT+ILVQFKKP NP+ E+ S + D+P+ S
Sbjct: 301 CEKVVDRCLAPDTATGEGCDNMTIILVQFKKP-NPSETEPED---SKPEPSEDEPSSSS 355
BLAST of CmaCh08G005880.1 vs. TAIR 10
Match:
AT4G31860.2 (Protein phosphatase 2C family protein )
HSP 1 Score: 463.8 bits (1192), Expect = 1.3e-130
Identity = 217/275 (78.91%), Postives = 249/275 (90.55%), Query Frame = 0
Query: 1 MGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAACLDLDTSTSFFGVYDGHG 60
MGIYLS+PKT+K S+DGEN +LRYGLSSMQGWRA+MEDAHAA LDLD +TSF GVYDGHG
Sbjct: 1 MGIYLSTPKTDKFSEDGENHKLRYGLSSMQGWRASMEDAHAAILDLDDNTSFLGVYDGHG 60
Query: 61 GKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDK 120
GK VSKFCAKYLH+QVL E+Y AGD+GTSLQK+F RMDEMM GQRGWRELAVLGDK++K
Sbjct: 61 GKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDKINK 120
Query: 121 ISGMIEGFIWSPKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGD 180
SGMIEG IWSP+S ++ N+ D+W+ EEGPHSDF GPN+GSTACVA++R+ QL VANAGD
Sbjct: 121 FSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGD 180
Query: 181 SRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNK 240
SRCVISRK QAYNLS+DHKPDLE EK+RILKAGGFI GRVNGSLNL+RAIGDMEFKQNK
Sbjct: 181 SRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLSRAIGDMEFKQNK 240
Query: 241 SMPAEKQIVTANPDITTVELCEDDEFLVIACDGIW 276
+P+EKQIVTA+PD+ TVELC+DD+FLV+ACDGIW
Sbjct: 241 FLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIW 275
BLAST of CmaCh08G005880.1 vs. TAIR 10
Match:
AT2G25620.1 (DNA-binding protein phosphatase 1 )
HSP 1 Score: 143.3 bits (360), Expect = 3.9e-34
Identity = 100/326 (30.67%), Postives = 162/326 (49.69%), Query Frame = 0
Query: 23 RYGLSSMQGWRATMEDAHAACLD--LDT---------STSFFGVYDGHGGKAVSKFCAKY 82
R G S G R++MEDA+ C+D +D+ ++F+GV+DGHGGK ++F +
Sbjct: 89 RSGAWSDIGSRSSMEDAY-LCVDNFMDSFGLLNSEAGPSAFYGVFDGHGGKHAAEFACHH 148
Query: 83 LHRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDKISGMIEGFIWS 142
+ R +++ + + ++ L +FL+ D L + + G +
Sbjct: 149 IPRYIVEDQEF-PSEINKVLSSAFLQTDTAFL-------------EACSLDGSLA----- 208
Query: 143 PKSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQA 202
+G+TA AI+ LVVANAGD R V+SR+G+A
Sbjct: 209 ---------------------------SGTTALAAILFGRSLVVANAGDCRAVLSRQGKA 268
Query: 203 YNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGD--MEFKQNKSMPAEKQIV 262
+S+DHKP E+ RI +GG + G +NG LN+ARA+GD ME + K ++ +
Sbjct: 269 IEMSRDHKPMSSKERRRIEASGGHVFDGYLNGQLNVARALGDFHMEGMKKKKDGSDCGPL 328
Query: 263 TANPDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVICERVFDRCL 322
A P++ T +L E+DEFL+I CDG+WD SQ VD+ +L+ E V+C + +
Sbjct: 329 IAEPELMTTKLTEEDEFLIIGCDGVWDVFMSQNAVDFARRRLQ-EHNDPVMCSK---ELV 363
Query: 323 APSAGGEGCDNMTMILVQFKKPFNPN 336
+ + DN+T ++V + PN
Sbjct: 389 EEALKRKSADNVTAVVVCLQPQPPPN 363
BLAST of CmaCh08G005880.1 vs. TAIR 10
Match:
AT2G33700.1 (Protein phosphatase 2C family protein )
HSP 1 Score: 135.6 bits (340), Expect = 8.1e-32
Identity = 100/339 (29.50%), Postives = 154/339 (45.43%), Query Frame = 0
Query: 23 RYGLSSMQGWRATMEDAH----------AACLDLDTSTSFFGVYDGHGGKAVSKFCAKYL 82
R G + QG + MED H A + + +F+GV+DGHGG + F K +
Sbjct: 84 RSGSCAEQGAKQFMEDEHICIDDLVNHLGAAIQCSSLGAFYGVFDGHGGTDAAHFVRKNI 143
Query: 83 HRQVLKHESYMAGDLGTSLQKSFLRMDEMMLGQRGWRELAVLGDKMDKISGMIEGFIWSP 142
R +++ S+ + +++ +FL+ D
Sbjct: 144 LRFIVEDSSFPL-CVKKAIKSAFLKADYEF------------------------------ 203
Query: 143 KSSEANNQVDSWSAEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAY 202
+ +++ + S G+TA A I +L++ANAGD R V+ R+G+A
Sbjct: 204 -ADDSSLDISS----------------GTTALTAFIFGRRLIIANAGDCRAVLGRRGRAI 263
Query: 203 NLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTAN 262
LSKDHKP+ EK RI K GG + G +NG L++ARAIGD K K ++
Sbjct: 264 ELSKDHKPNCTAEKVRIEKLGGVVYDGYLNGQLSVARAIGDWHMKGPKGSACP---LSPE 323
Query: 263 PDITTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKTESKLSVICERVFDRCLAPS 322
P++ +L EDDEFL++ CDG+WD MSSQ V +L + ER + +
Sbjct: 324 PELQETDLSEDDEFLIMGCDGLWDVMSSQCAVTIARKELMIHND----PERCSRELVREA 363
Query: 323 AGGEGCDNMTMILVQFKKPFNPNAASAEELPSSSNQLRS 352
CDN+T+I+V F+P+ E+ S RS
Sbjct: 384 LKRNTCDNLTVIVV----CFSPDPPQRIEIRMQSRVRRS 363
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SZ53 | 1.2e-157 | 75.07 | Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana OX=3702 GN=At4g31860 ... | [more] |
O81716 | 2.5e-155 | 72.98 | Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana OX=3702 GN=PPC4-2 PE=... | [more] |
Q6ETK3 | 5.3e-153 | 75.00 | Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica OX=39947 GN=O... | [more] |
Q67UP9 | 6.9e-153 | 72.97 | Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica OX=39947 GN=O... | [more] |
Q653S3 | 1.0e-143 | 67.69 | Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica OX=39947 GN=O... | [more] |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh08G005880.1:exon:662 | CmaCh08G005880.1:exon:662 | exon |
CmaCh08G005880.1:exon:663 | CmaCh08G005880.1:exon:663 | exon |
CmaCh08G005880.1:exon:664 | CmaCh08G005880.1:exon:664 | exon |
CmaCh08G005880.1:exon:665 | CmaCh08G005880.1:exon:665 | exon |
CmaCh08G005880.1:exon:666 | CmaCh08G005880.1:exon:666 | exon |
CmaCh08G005880.1:exon:667 | CmaCh08G005880.1:exon:667 | exon |
CmaCh08G005880.1:exon:668 | CmaCh08G005880.1:exon:668 | exon |
CmaCh08G005880.1:exon:669 | CmaCh08G005880.1:exon:669 | exon |
CmaCh08G005880.1:exon:670 | CmaCh08G005880.1:exon:670 | exon |
CmaCh08G005880.1:exon:671 | CmaCh08G005880.1:exon:671 | exon |
CmaCh08G005880.1:exon:672 | CmaCh08G005880.1:exon:672 | exon |
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh08G005880.1:five_prime_utr | CmaCh08G005880.1:five_prime_utr | five_prime_UTR |
CmaCh08G005880.1:five_prime_utr | CmaCh08G005880.1:five_prime_utr_2 | five_prime_UTR |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Type |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_2 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_3 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_4 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_5 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_6 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_7 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_8 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_9 | CDS |
CmaCh08G005880.1:cds | CmaCh08G005880.1:cds_10 | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Type |
CmaCh08G005880.1 | CmaCh08G005880.1-protein | polypeptide |