CmaCh07G009030.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G009030.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr07: 4272456 .. 4272953 (-)
Sequence length	348
RNA-Seq Expression	CmaCh07G009030.1
Synteny	CmaCh07G009030.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTGGCAGAAGATTGGCCCATTCTTTGTTTCATATGGCTACCTGTTACCATTTGTTGTTGATAAAATGGTGGGTTCCATTTTTCAACAGTCATTTACACACACAAAACCCATCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTGAAATTTTCAGCACAAACCCAGAATTGGCAAGAAGGAGAGGTCAAAACCAGAGCGAAAAACTGTAAAAAAAACAGAGAGAAAGGGATTCAACCATTTGTAGCAGCAGTAAATATTGTTGGAGAGGCAGTTAAAAATGGAAGGAGTGAAGGAAAAGAGTGAAATTGGGGAATACCCATGTGATCCTTGTAGATCTTTTGGTAAAAAATGCAGCAATTTGGTTAAAAAACAGCGCACTAAATTCTACATCCTCCGCCGCTGTGTGGCTATGCTTCTTTGCTGGCATGAACGTGGCGACCCTTGATATATCTCCACCACCGCCGCCGCTGTCTCCGCCTTAG

mRNA sequence

ATGGTGTGGCAGAAGATTGGCCCATTCTTTGTTTCATATGGCTACCTGTTACCATTTGTTGTTGATAAAATGGTGGGTTCCATTTTTCAACAGTCATTTACACACACAAAACCCATCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTGAAATTTTCAGCACAAACCCAGAATTGGCAAGAAGGAGAGATCTTTTGGTAAAAAATGCAGCAATTTGGTTAAAAAACAGCGCACTAAATTCTACATCCTCCGCCGCTGTGTGGCTATGCTTCTTTGCTGGCATGAACGTGGCGACCCTTGATATATCTCCACCACCGCCGCCGCTGTCTCCGCCTTAG

Coding sequence (CDS)

ATGGTGTGGCAGAAGATTGGCCCATTCTTTGTTTCATATGGCTACCTGTTACCATTTGTTGTTGATAAAATGGTGGGTTCCATTTTTCAACAGTCATTTACACACACAAAACCCATCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCTGAAATTTTCAGCACAAACCCAGAATTGGCAAGAAGGAGAGATCTTTTGGTAAAAAATGCAGCAATTTGGTTAAAAAACAGCGCACTAAATTCTACATCCTCCGCCGCTGTGTGGCTATGCTTCTTTGCTGGCATGAACGTGGCGACCCTTGATATATCTCCACCACCGCCGCCGCTGTCTCCGCCTTAG

Protein sequence

MVWQKIGPFFVSYGYLLPFVVDKMVGSIFQQSFTHTKPISSSSSSSSSSSSSSEIFSTNPELARRRDLLVKNAAIWLKNSALNSTSSAAVWLCFFAGMNVATLDISPPPPPLSPP

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh07G009030.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh07G009030.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..59

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh07G009030	CmaCh07G009030	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G009030.1:exon:730	CmaCh07G009030.1:exon:730	exon
CmaCh07G009030.1:exon:731	CmaCh07G009030.1:exon:731	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh07G009030.1:cds	CmaCh07G009030.1:cds_2	CDS
CmaCh07G009030.1:cds	CmaCh07G009030.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh07G009030.1	CmaCh07G009030.1-protein	polypeptide