CmaCh07G006200.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G006200.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionEpidermal patterning factor-like protein
LocationCma_Chr07: 2665843 .. 2667214 (-)
Sequence length862
RNA-Seq ExpressionCmaCh07G006200.1
SyntenyCmaCh07G006200.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGCCAATTCACCGTAGCCAAAGCTTCTGTAGTCACTCTCTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATAAGGTGGGAGTGTTCAGAACAAAATCAGAACGAACTCACAAGAAAACCCAAATTCCAAAAGTTCAATTAAAAACCAGAAATGAAAGAGAAAGAGAAAATAAAAGGGAAACGAAAACGAAATCCCACTCGTACACAGCTGCCATTGCGCTGCTCTCATCTGCTAATTTGTTCTGTTTAACTCTGTTTTTTAGGCTCTTCTTTCGAGTTCTGAGGAGCTCTGCAATTTTCGGTACTCTCTGCAATCTTTTTCCCTTTTCTTTTTCTTTTTGTCTTCCATGTTCCATCAACTCAAATATCATTCTCAGACTAAGATAGATTCAGAGGGAATTCATTTTATATGATATGCACGTACGAGCAGTAGAGAGTGAAAAATCAGAAGCTAAGCTCACTTTTCTTTCCCCATCTCTCTCTGTTAGAACGAAAAGAAAAATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCTGTAGAATCTTGTGTGCGACTGTTTCTTTTCTCTTTCTTCTGATTTTGGCATCGACTCAGATGAGATTCATGGCTGAAGGTAAATGGGTATCGCTTGAAACTTCAAAAAAGAGTCCAAAACCAAAATTCTTGAACTGAATTTTTGTGAATCGTTTTCCTTTGCAGGCAGATCTATTTCAAAGAGTGGCAAGGTCAGTCCACAAGGCCAGCCCTTTCCTCTCTTTTTGATTCATTTACTGTTTCTGAAAGCTTGATTGTTAAGAAGAAATTTGGTTTTTGTTTTGGTGAATTGGGATAGACAGTGAGTGAAGATAAAGTGGTATTACGAGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCTTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAAGTAGATGATCATCATCAACTCTGTAAATTAGTGATTATATGATTGTTTCTTTCACTTAACACTCTCTAGATATCTCTCTCTTTTGTTCTGACACTCTTGAGGGTTGAAAGCAGGCATTTGATGAAGAGAATTATGAACTGGGTTTCTTTTCTAACATGCAACTACTTCGGATTCCTTCCATATCAGTCCCATCTTGAAACACTTAAATGGGATAACTCATGAACAGTTTGCTCAAGTATAGAAAAGTCGGTAAATTGAATGGGAGAGAGAGAGTGAATTTGATTCATTTGAAGGGTGG

mRNA sequence

ATGACAGGCCAATTCACCGTAGCCAAAGCTTCTGTAGTCACTCTCTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATAAGGCTCTTCTTTCGAGTTCTGAGGAGCTCTGCAATTTTCGTAGAGAGTGAAAAATCAGAAGCTAAGCTCACTTTTCTTTCCCCATCTCTCTCTGTTAGAACGAAAAGAAAAATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCTGTAGAATCTTGTGTGCGACTGTTTCTTTTCTCTTTCTTCTGATTTTGGCATCGACTCAGATGAGATTCATGGCTGAAGGCAGATCTATTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGGTATTACGAGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCTTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAAGTAGATGATCATCATCAACTCTGTAAATTAGTGATTATATGATTGTTTCTTTCACTTAACACTCTCTAGATATCTCTCTCTTTTGTTCTGACACTCTTGAGGGTTGAAAGCAGGCATTTGATGAAGAGAATTATGAACTGGGTTTCTTTTCTAACATGCAACTACTTCGGATTCCTTCCATATCAGTCCCATCTTGAAACACTTAAATGGGATAACTCATGAACAGTTTGCTCAAGTATAGAAAAGTCGGTAAATTGAATGGGAGAGAGAGAGTGAATTTGATTCATTTGAAGGGTGG

Coding sequence (CDS)

ATGACAGGCCAATTCACCGTAGCCAAAGCTTCTGTAGTCACTCTCTTGCTTGGGAAGAAGAAAGGATATGGATATGGCGTGATAAGGCTCTTCTTTCGAGTTCTGAGGAGCTCTGCAATTTTCGTAGAGAGTGAAAAATCAGAAGCTAAGCTCACTTTTCTTTCCCCATCTCTCTCTGTTAGAACGAAAAGAAAAATGGGGTGTGAGTGCAACAACAATGGCGTCATTGGCCGCTGTAGAATCTTGTGTGCGACTGTTTCTTTTCTCTTTCTTCTGATTTTGGCATCGACTCAGATGAGATTCATGGCTGAAGGCAGATCTATTTCAAAGAGTGGCAAGACAGTGAGTGAAGATAAAGTGGTATTACGAGGACAAATTGGGTCAAGGCCTCCAAAATGTGAGAGAAGATGCAGCTGGTGTGCACACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAGTCTTCAACAATGAAGAACATAGCTTATGCTAGAGATGAAGCCTCAAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA

Protein sequence

MTGQFTVAKASVVTLLLGKKKGYGYGVIRLFFRVLRSSAIFVESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP
Homology
[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 60/119 (50.42%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 89  LFLLILASTQMRFMAEGR------SISKSGKTVSEDKVVLRGQIGSRPPKCER-RCSWCA 148
           L LLIL ST    MA GR        +KSG    + K+++RG IGSRPP+CER RC  C 
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEFTKSGD--QDVKMMMRGLIGSRPPRCERVRCRSCG 71

Query: 149 HCEAIQVPANPQ------------KSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 188
           HCEAIQVP NPQ             SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.7e-09
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 123 RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMK-------------NIAYARDEAS 182
           + ++GS PP C  RC+ C  C AIQVP  P +S   +             ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 183 NYKPMSWKCKCGSLIFNP 188
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 0 

Query: 117 EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSW 176
           E+ V  R +IGS+PP CE++C  C  CEAIQ P       T+ +I +     +NY+P  W
Sbjct: 48  EEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP-------TISSIPHLSPHYANYQPEGW 104

Query: 177 KCKC 181
           +C C
Sbjct: 108 RCHC 104

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05
Identity = 36/116 (31.03%), Postives = 50/116 (43.10%), Query Frame = 0 

Query: 78  RCRILCATVSFLFLLILASTQMRFMAEGRSISK------SGKTVSEDKVVLRGQIGSRPP 137
           R R L A +    LL L S      A+GR I +       G  +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 138 KCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 188
            C  +C  C  C+ + VP  P  S  ++           Y P +W+CKCG+ +F P
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSMPLE-----------YYPEAWRCKCGNKLFMP 109

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.7e-04
Identity = 31/118 (26.27%), Postives = 53/118 (44.92%), Query Frame = 0 

Query: 81  ILCATVSFLFLLILASTQMRFMAE--------GRSISKS---GKTVSEDKVVLRGQIGSR 140
           +L   + + FLL  +S+    +           + I++S   G+ V + ++   G  GS 
Sbjct: 4   VLPTLIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRL---GGPGSV 63

Query: 141 PPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 188
           PP C  +C  C  C+A+ VP  P     ++           Y P +W+CKCG+ +F P
Sbjct: 64  PPMCRLKCGKCEPCKAVHVPIQPGLIMPLE-----------YYPEAWRCKCGNKLFMP 107

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy TrEMBL
Match: A0A6J1KNP8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.6e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 42  VESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRF 101
           VESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRF
Sbjct: 6   VESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRF 65

Query: 102 MAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNI 161
           MAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNI
Sbjct: 66  MAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNI 125

Query: 162 AYARDEASNYKPMSWKCKCGSLIFNP 188
           AYARDEASNYKPMSWKCKCGSLIFNP
Sbjct: 126 AYARDEASNYKPMSWKCKCGSLIFNP 151

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy TrEMBL
Match: A0A6J1HJ94 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463445 PE=3 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 4.0e-67
Identity = 134/159 (84.28%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 29  RLFFRVLRSSAIFVESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSF 88
           RLFFRVLRSSAIF                     K KMGCECNNNGVIGR RILCATVSF
Sbjct: 37  RLFFRVLRSSAIF-------------------ERKEKMGCECNNNGVIGRSRILCATVSF 96

Query: 89  LFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQV 148
           LF LILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQV
Sbjct: 97  LFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQV 156

Query: 149 PANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 188
           PANPQKSS MKNIAYARDEASNYKPMSWKCKCGSLIFNP
Sbjct: 157 PANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 176

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy TrEMBL
Match: A0A6J1KLZ1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.9e-65
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 66  MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 125
           MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ
Sbjct: 1   MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 60

Query: 126 IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF 185
           IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF
Sbjct: 61  IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF 120

Query: 186 NP 188
           NP
Sbjct: 121 NP 122

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy TrEMBL
Match: A0A6J1BSQ3 (Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC111005366 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.3e-54
Identity = 106/127 (83.46%), Postives = 110/127 (86.61%), Query Frame = 0 

Query: 66  MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 125
           M CECNNNGVIGR RILCATV FLFLLILASTQMRFMAEGR + K G+TV E+KVVLRGQ
Sbjct: 1   MSCECNNNGVIGRSRILCATVPFLFLLILASTQMRFMAEGRLVPKRGQTVGEEKVVLRGQ 60

Query: 126 IGSRPPKCERRCSWCAHCEAIQVPANPQK-----SSTMKNIAYARDEASNYKPMSWKCKC 185
           IGSRPPKCERRCSWC HCEAIQVP NPQK     SS   N+AYARDEASNYKPMSWKCKC
Sbjct: 61  IGSRPPKCERRCSWCGHCEAIQVPTNPQKSANTNSSAFNNMAYARDEASNYKPMSWKCKC 120

Query: 186 GSLIFNP 188
           GSLIFNP
Sbjct: 121 GSLIFNP 127

[Close]
BLAST of CmaCh07G006200.1 vs. ExPASy TrEMBL
Match: A0A6J1GDI3 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453017 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 7.4e-53
Identity = 107/128 (83.59%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 66  MGCECNNNG-VIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRG 125
           MGCECNNNG VIGR RILCATVSFL LLILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60

Query: 126 QIGSRPPKCERRCSWCAHCEAIQVPANPQKSST-----MKNIAYARDEASNYKPMSWKCK 185
           QIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +KNI YARDEASNYKPMSWKCK
Sbjct: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120

Query: 186 CGSLIFNP 188
           CGSLIFNP
Sbjct: 121 CGSLIFNP 128

[Close]
BLAST of CmaCh07G006200.1 vs. NCBI nr
Match: XP_023003266.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 42  VESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRF 101
           VESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRF
Sbjct: 6   VESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRF 65

Query: 102 MAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNI 161
           MAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNI
Sbjct: 66  MAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNI 125

Query: 162 AYARDEASNYKPMSWKCKCGSLIFNP 188
           AYARDEASNYKPMSWKCKCGSLIFNP
Sbjct: 126 AYARDEASNYKPMSWKCKCGSLIFNP 151

[Close]
BLAST of CmaCh07G006200.1 vs. NCBI nr
Match: XP_023518504.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.1 bits (684), Expect = 5.8e-68
Identity = 129/142 (90.85%), Postives = 133/142 (93.66%), Query Frame = 0 

Query: 46  KSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEG 105
           K++   +  SP LSVRTKRKMGCECNNNGVIGR RILCAT+SFLF LILASTQMRFMAEG
Sbjct: 11  KNQKLSSLFSPHLSVRTKRKMGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEG 70

Query: 106 RSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYAR 165
           RSI KSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYAR
Sbjct: 71  RSIPKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYAR 130

Query: 166 DEASNYKPMSWKCKCGSLIFNP 188
           DEASNYKPMSWKCKCGSLIFNP
Sbjct: 131 DEASNYKPMSWKCKCGSLIFNP 152

[Close]
BLAST of CmaCh07G006200.1 vs. NCBI nr
Match: XP_022963149.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 264.2 bits (674), Expect = 8.3e-67
Identity = 134/159 (84.28%), Postives = 134/159 (84.28%), Query Frame = 0 

Query: 29  RLFFRVLRSSAIFVESEKSEAKLTFLSPSLSVRTKRKMGCECNNNGVIGRCRILCATVSF 88
           RLFFRVLRSSAIF                     K KMGCECNNNGVIGR RILCATVSF
Sbjct: 37  RLFFRVLRSSAIF-------------------ERKEKMGCECNNNGVIGRSRILCATVSF 96

Query: 89  LFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQV 148
           LF LILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQV
Sbjct: 97  LFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQIGSRPPKCERRCSWCAHCEAIQV 156

Query: 149 PANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 188
           PANPQKSS MKNIAYARDEASNYKPMSWKCKCGSLIFNP
Sbjct: 157 PANPQKSSAMKNIAYARDEASNYKPMSWKCKCGSLIFNP 176

[Close]
BLAST of CmaCh07G006200.1 vs. NCBI nr
Match: XP_023003267.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 257.3 bits (656), Expect = 1.0e-64
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 66  MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 125
           MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ
Sbjct: 1   MGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRGQ 60

Query: 126 IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF 185
           IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF
Sbjct: 61  IGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIF 120

Query: 186 NP 188
           NP
Sbjct: 121 NP 122

[Close]
BLAST of CmaCh07G006200.1 vs. NCBI nr
Match: KAG6594944.1 (EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.9 bits (655), Expect = 1.3e-64
Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 0 

Query: 61  RTKRKMGCECNNNGVIGRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKV 120
           RTKRKMGCECNNNGVIGR RILCAT+SFLF LILASTQMRFMAEGRSI KSGKTVSEDKV
Sbjct: 92  RTKRKMGCECNNNGVIGRSRILCATLSFLFFLILASTQMRFMAEGRSIPKSGKTVSEDKV 151

Query: 121 VLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKC 180
           VLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSST+KNIAYARDEASNYKPMSWKCKC
Sbjct: 152 VLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTLKNIAYARDEASNYKPMSWKCKC 211

Query: 181 GSLIFNP 188
           GSLIFNP
Sbjct: 212 GSLIFNP 218

[Close]
BLAST of CmaCh07G006200.1 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 7.9e-23
Identity = 60/119 (50.42%), Postives = 73/119 (61.34%), Query Frame = 0 

Query: 89  LFLLILASTQMRFMAEGR------SISKSGKTVSEDKVVLRGQIGSRPPKCER-RCSWCA 148
           L LLIL ST    MA GR        +KSG    + K+++RG IGSRPP+CER RC  C 
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEFTKSGD--QDVKMMMRGLIGSRPPRCERVRCRSCG 71

Query: 149 HCEAIQVPANPQ------------KSSTMKNIAYAR-DEASNYKPMSWKCKCGSLIFNP 188
           HCEAIQVP NPQ             SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of CmaCh07G006200.1 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 2.6e-10
Identity = 29/78 (37.18%), Postives = 39/78 (50.00%), Query Frame = 0 

Query: 123 RGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMK-------------NIAYARDEAS 182
           + ++GS PP C  RC+ C  C AIQVP  P +S   +             ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 183 NYKPMSWKCKCGSLIFNP 188
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of CmaCh07G006200.1 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 58.2 bits (139), Expect = 8.5e-09
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 0 

Query: 117 EDKVVLRGQIGSRPPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSW 176
           E+ V  R +IGS+PP CE++C  C  CEAIQ P       T+ +I +     +NY+P  W
Sbjct: 48  EEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP-------TISSIPHLSPHYANYQPEGW 104

Query: 177 KCKC 181
           +C C
Sbjct: 108 RCHC 104

[Close]
BLAST of CmaCh07G006200.1 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-06
Identity = 36/116 (31.03%), Postives = 50/116 (43.10%), Query Frame = 0 

Query: 78  RCRILCATVSFLFLLILASTQMRFMAEGRSISK------SGKTVSEDKVVLRGQIGSRPP 137
           R R L A +    LL L S      A+GR I +       G  +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 138 KCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 188
            C  +C  C  C+ + VP  P  S  ++           Y P +W+CKCG+ +F P
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSMPLE-----------YYPEAWRCKCGNKLFMP 109

[Close]
BLAST of CmaCh07G006200.1 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-05
Identity = 31/118 (26.27%), Postives = 53/118 (44.92%), Query Frame = 0 

Query: 81  ILCATVSFLFLLILASTQMRFMAE--------GRSISKS---GKTVSEDKVVLRGQIGSR 140
           +L   + + FLL  +S+    +           + I++S   G+ V + ++   G  GS 
Sbjct: 4   VLPTLIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRL---GGPGSV 63

Query: 141 PPKCERRCSWCAHCEAIQVPANPQKSSTMKNIAYARDEASNYKPMSWKCKCGSLIFNP 188
           PP C  +C  C  C+A+ VP  P     ++           Y P +W+CKCG+ +F P
Sbjct: 64  PPMCRLKCGKCEPCKAVHVPIQPGLIMPLE-----------YYPEAWRCKCGNKLFMP 107

The following BLAST results are available for this feature:
BLAST of CmaCh07G006200.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0681.1e-2150.42EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT53.7e-0937.18EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
C4B8C41.2e-0740.63EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q2V3I31.5e-0531.03EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LUH92.7e-0426.27EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of CmaCh07G006200.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KNP86.6e-78100.00Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1HJ944.0e-6784.28Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1KLZ14.9e-65100.00Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1BSQ32.3e-5483.46Epidermal patterning factor-like protein OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1GDI37.4e-5383.59Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of CmaCh07G006200.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023003266.11.4e-77100.00EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita maxima][more]
XP_023518504.15.8e-6890.85EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X1 [Cucurbita pepo subsp. pep... [more]
XP_022963149.18.3e-6784.28EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata][more]
XP_023003267.11.0e-64100.00EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima][more]
KAG6594944.11.3e-6496.06EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subs... [more]
BLAST of CmaCh07G006200.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37810.17.9e-2350.42unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G10310.12.6e-1037.18unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13898.18.5e-0940.63unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT4G14723.11.0e-0631.03BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);... [more]
AT3G22820.12.0e-0526.27allergen-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 125..187
e-value: 1.1E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR33109:SF71EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2coord: 71..187
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 71..187

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh07G006200CmaCh07G006200gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh07G006200.1:exon:4207CmaCh07G006200.1:exon:4207exon
CmaCh07G006200.1:exon:4206CmaCh07G006200.1:exon:4206exon
CmaCh07G006200.1:exon:4205CmaCh07G006200.1:exon:4205exon
CmaCh07G006200.1:exon:4204CmaCh07G006200.1:exon:4204exon
CmaCh07G006200.1:exon:4203CmaCh07G006200.1:exon:4203exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh07G006200.1:three_prime_utrCmaCh07G006200.1:three_prime_utrthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh07G006200.1:cdsCmaCh07G006200.1:cds_5CDS
CmaCh07G006200.1:cdsCmaCh07G006200.1:cds_4CDS
CmaCh07G006200.1:cdsCmaCh07G006200.1:cds_3CDS
CmaCh07G006200.1:cdsCmaCh07G006200.1:cds_2CDS
CmaCh07G006200.1:cdsCmaCh07G006200.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh07G006200.1CmaCh07G006200.1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010374 stomatal complex development
biological_process GO:0010052 guard cell differentiation
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane