CmaCh07G003580.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAATTGCATCAGCTCACCCCATCTCCCGCCGTTCCAAAGGATCAAGGATTTCATGTGTTTGCATGAAGAACTCTACGATTTGGCTGAGCCAGTTGAGAAGATCGCTGGCCTAAAGCTAACAAGGGCGGTGCTAGTAGTTGGGCGTGGGGCTGCTACGCCTCCCGCTCATGTTCTTATTGATGATGATGATGATATTACCAAGCCTGCAGCTTTGTGCAAACTTCCCAAGGCCACCATTGTTGTTAGCAAACAACAGCTCGAGTTTCTTTTGACAAACTCCGAACAGTTTGGCTCTCAAGGCATTGCTGTTCAATTCTCTGATCGTTTCAAGTTTGACCAATCGTGTTCTAAATGGTGCCCCGCCTTACCCACCATTCTCGAAGTTCATAATTACTAA ATGGGAAATTGCATCAGCTCACCCCATCTCCCGCCGTTCCAAAGGATCAAGGATTTCATGTGTTTGCATGAAGAACTCTACGATTTGGCTGAGCCAGTTGAGAAGATCGCTGGCCTAAAGCTAACAAGGGCGGTGCTAGTAGTTGGGCGTGGGGCTGCTACGCCTCCCGCTCATGTTCTTATTGATGATGATGATGATATTACCAAGCCTGCAGCTTTGTGCAAACTTCCCAAGGCCACCATTGTTGTTAGCAAACAACAGCTCGAGTTTCTTTTGACAAACTCCGAACAGTTTGGCTCTCAAGGCATTGCTGTTCAATTCTCTGATCGTTTCAAGTTTGACCAATCGTGTTCTAAATGGTGCCCCGCCTTACCCACCATTCTCGAAGTTCATAATTACTAA ATGGGAAATTGCATCAGCTCACCCCATCTCCCGCCGTTCCAAAGGATCAAGGATTTCATGTGTTTGCATGAAGAACTCTACGATTTGGCTGAGCCAGTTGAGAAGATCGCTGGCCTAAAGCTAACAAGGGCGGTGCTAGTAGTTGGGCGTGGGGCTGCTACGCCTCCCGCTCATGTTCTTATTGATGATGATGATGATATTACCAAGCCTGCAGCTTTGTGCAAACTTCCCAAGGCCACCATTGTTGTTAGCAAACAACAGCTCGAGTTTCTTTTGACAAACTCCGAACAGTTTGGCTCTCAAGGCATTGCTGTTCAATTCTCTGATCGTTTCAAGTTTGACCAATCGTGTTCTAAATGGTGCCCCGCCTTACCCACCATTCTCGAAGTTCATAATTACTAA MGNCISSPHLPPFQRIKDFMCLHEELYDLAEPVEKIAGLKLTRAVLVVGRGAATPPAHVLIDDDDDITKPAALCKLPKATIVVSKQQLEFLLTNSEQFGSQGIAVQFSDRFKFDQSCSKWCPALPTILEVHNY Homology
BLAST of CmaCh07G003580.1 vs. ExPASy TrEMBL
Match: A0A0A0KHP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511050 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 3.7e-30 Identity = 73/136 (53.68%), Postives = 86/136 (63.24%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. ExPASy TrEMBL
Match: A0A5D3CLY8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00250 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.4e-28 Identity = 73/139 (52.52%), Postives = 85/139 (61.15%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. ExPASy TrEMBL
Match: B9HD50 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G018200 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.8e-06 Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. ExPASy TrEMBL
Match: A0A5N5M953 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_008876 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.4e-05 Identity = 54/152 (35.53%), Postives = 74/152 (48.68%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. ExPASy TrEMBL
Match: A0A0B2RPL4 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040647 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 5.9e-04 Identity = 44/141 (31.21%), Postives = 61/141 (43.26%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. NCBI nr
Match: KAG6594706.1 (hypothetical protein SDJN03_11259, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52 Identity = 108/133 (81.20%), Postives = 112/133 (84.21%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. NCBI nr
Match: KAG6603830.1 (hypothetical protein SDJN03_04439, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 161.8 bits (408), Expect = 4.1e-36 Identity = 84/136 (61.76%), Postives = 97/136 (71.32%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. NCBI nr
Match: KAA0025575.1 (hypothetical protein E6C27_scaffold253G00640 [Cucumis melo var. makuwa] >TYK12450.1 hypothetical protein E5676_scaffold255G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 7.1e-28 Identity = 73/139 (52.52%), Postives = 85/139 (61.15%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. NCBI nr
Match: KAE8647639.1 (hypothetical protein Csa_004428 [Cucumis sativus]) HSP 1 Score: 133.7 bits (335), Expect = 1.2e-27 Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 0
BLAST of CmaCh07G003580.1 vs. NCBI nr
Match: KAF9851460.1 (hypothetical protein H0E87_015599 [Populus deltoides]) HSP 1 Score: 60.8 bits (146), Expect = 1.0e-05 Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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