CmaCh07G003230.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G003230.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr07: 1407621 .. 1410876 (-)
Sequence length393
RNA-Seq ExpressionCmaCh07G003230.1
SyntenyCmaCh07G003230.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGATGTTCTTGTTGGTGGTGAAGCAAGTGGTATGTTCCCTTCAGTTATGTCGGTTTTGGGTGTGATCGTCACAGTTTGTATAACTTGCTTCTAACTTGAGGAACATGATATTTATGCAGAATATTGTAGTGGGTTGATTTAGGAGAATATAAAAATGTTTGTTTTCTTCAAACTTTTGCTCTGATAGCGACCATGGCATCATGTAACTGGTACTACTGAAGGGTTCCATTTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGTTCTCATAGCTTTGCTTTGGGCTTCCCAAAAAGCCTCATACCAATGGAGTTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGCTGATGTGGGACTTTCATCATCCAACACCCTTTGTTATCTTGGCATACCATGCAAGCCACTTGTTTCACAACATGGACAGGCTATTATGGATTTGCTTTTAGCCAAGGTAAGTCCTATCATTTACTTAGTTATGTAACAGCCAGATTAAGGTATTGATTTTACATTCTACTCATAGTCAAAACCGGTAACCGTCAAAGTCTACCTAGCAGATATTGTCTTCTTTATAAAACTTGTCTATTGGGGAGAGATTTTCATATCTTTATAATGGATGTTTCGTTTCTCTCTTCAACCGACGTGCGATCTCACAATCCATGCCCTCAACGTCTATTAGAGAAAGGTTTCCGTACCCTTACAACGAATGTTTCGTTTCCCTCTTCAACCGATGTGGGATATCACAATGTACTCCTCTTGGAGTCCCAGCTCCTGGTTAACACATCACATGGCTGTTAGAGAGAGGTTTCCCCACTTTTATAAAAAATGTTTTGTTTTCCTCTTCAACTGAGGTTAGATCTCACAATTCACCCTCCTTGCCCCAACGTCCTCGCTTGCACACCACTTGGTGTCTGGCTCTGATATCATTTGTAATAGCTCAAGCCACCGTGTTCCCCTCTCCAACGGATGTGGGATCTCACAATCCACTTCTTGGGGGCCAGTGTCCTCGATGGCACATCTCTCGGTGTCTGGCTCTAATACCATTTGTAACAGCACAAGTCCACCGTGTTCTCCCTCCAACCGATGTTAGATCTCACAATCCACCGCCTTGGGGGCCAGCGTCCTCATTGGCACACCGTGTGTCTGACTCTGATACCATTTGTAACAATCAAATCTCACCGCTAGCAGACATTGTCCTCTTTAGGCTTCCACTTCTAGACTTTCCCTCACGGTTTTGAAACTCATCTATTAGGGAGAGATTTCTACATCCTTATAAGGAATGCTTCGTTCCACTATTTAAGACGTGGGATTTCACCCCTGGAGAGAAGATATAAAATATGTTCCAAAATTGAGGTGTGCACCCTTGATGGAAACTATGGTGTGAGGTTAGTCTAAAAATGCTTCACCGAAGACAGAGTCATTTTTCAGCTATCTGTTGACTGCTTTTGCTCTCTGTTGCACAAAAGATCAATTTTATTAACTCACGGTTGGTGATTGAAAGCAGTACTAAAACTGAGAGTGTGCTGAATGAGAAAGATGGTAGAGCATCTGGCAGTGTCTCCGATGCTATGCGCTCAACCTGCAAGATGGCGGTCTCCCGGATGCAAGACGAGCTGAAGCAGAACAGAACTCTGAGAACATAGCATTGATTATGTGAATGAGGTGAATCAGTTCTGTTGCCATCTAACTCATCTATCGATTATCCATCTTCAGCTCACTCGTCTTTCATGCTTTTGCAGTTATGTGATCAAGGGTTGAACCAGGTTGCAGCATTGGTTGACTGTGAACGGATCCCTCAATTGCCTACTGCCCCTTCACCGTTGGTGGCGCATCTTTTGTTCCTACTTGTGAACGCAACATTACACTCTCCAGATGGGTGAGGGATCTGCAGCTCACTGGATTCATACCTATGGACGCTCCTCCTCCTCCTGGAACCATCTTCTTGTTCTCTTGCATTTTCCTAAAACTCAGAATCATGTCTCTTTAAGATGATGATTCATCTCATTGATTGATTTAATATCGTTTGGTGAAATATGGTTCTCAATACCGGATCTATTTGTAGGTCATTTTTGGACTTTTTTGTCGGTATTTTTTTTCAAAGTTTTAAAATACGTCTGTTAAAGAAAAAGTTTACACACCGTTATAAAAGGTACGTCCCCATTCATACATGACTTTTAAGGATGGAATGAACTATGAAGAAAAGATATGGGGTTGAGAATAGTAGTCAGTAAAATGAATGTGGGCAGTTTCAGAGAGCAGAGAGGATGAAAGTAAAAGAGTGTGAAGTAAGCAGAGAAAGAGGGAAAAGGAAGGCCAGTTGAATGTGATTAATGCAGACGCAAGGAGCGGGTACGCAAGCATTCAAATGCGTTTGTGTATAGAATAGTTGTTGACTGGGGTGTGAGTCAGATGAGATGTGTGATGAACTTTTGTGTCAAAAGGTAAGAAAAAAATGGGTTAAGGGTAAGGGAACTGCGTGGTTTTGGTTGGAGGATACACAGTTCAAAAGCTTTAAGAAGGTGATACCCTGACGCTGCCTCCACTCCAGCACCCCACCTTTGCTTTTCCTTCCTTCTTTTTCTGGTTTTTCTTTGCCGCCAATTCAAGTAACCTATAACCCTCTCTCAATTCACGCTTATTCTTCTCACCTAACAATTCTCTTCTTTTTCTTTATGTTTCCAATCAACAGTTTTTTAAAACTCGCAGACAAAGCTTCGAATTTTGTCCACTGGATCATTATTGGGAAAGGAAAAACAAAAACTTTGAAAACCCCTTATTTAAAATAAGATTAGGTTTCATGAACCAAAATTATACCCATAACAAAGAATTAAACAGTATTTAATTGAGCGGCAAGGGATAAGGTGGGTTGGGTAAGCATCGTTCTGTAGTGTTAGGCTCATCATAATCAATTATTAATGAGAGAGATTTAGATTTATAGTTACAGTTGTATTAAGTATTCATAAAGTAAGGCTTCAAGAAAGGTAAGGTCATTCTTTAGATTAAAGAATTTAAATTACAACCAAAACATTATGCCCATCATTCCTCATCCAAAAGGAAATTAATTAAAAAACAAAGCTTTGGAAGAATATCCTCTCCGATGGGTTATTTTACAACTAATTACAGATGAAGAGCACCATAATCAACGTGATTAAATCAACTGAGCATGTGATGCCATGTGAAAATTTGAATTGGCGTAACCTCTTCAATTACATTAACTAG

mRNA sequence

ATGGACGATGTTCTTGTTGGTGGTGAAGCAAGTGGTATGTTCCCTTCAGTTATGTCGGTTTTGGGTGTGATCGTCACATGTCTCCGATGCTATGCGCTCAACCTGCAAGATGGCGGTCTCCCGGATGCAAGACGAGCTGAAGCAGAACAGAACTCTGAGAACATAGCATTGATTATACGCAAGGAGCGGGTACGCAAGCATTCAAATGCGTTTGTGTATAGAATAGTTGTTGACTGGGGTGTGAGTCAGATGAGATGTGTGATGAACTTTTGTGTCAAAAGTAAGGCTTCAAGAAAGATGAAGAGCACCATAATCAACGTGATTAAATCAACTGAGCATGTGATGCCATGTGAAAATTTGAATTGGCGTAACCTCTTCAATTACATTAACTAG

Coding sequence (CDS)

ATGGACGATGTTCTTGTTGGTGGTGAAGCAAGTGGTATGTTCCCTTCAGTTATGTCGGTTTTGGGTGTGATCGTCACATGTCTCCGATGCTATGCGCTCAACCTGCAAGATGGCGGTCTCCCGGATGCAAGACGAGCTGAAGCAGAACAGAACTCTGAGAACATAGCATTGATTATACGCAAGGAGCGGGTACGCAAGCATTCAAATGCGTTTGTGTATAGAATAGTTGTTGACTGGGGTGTGAGTCAGATGAGATGTGTGATGAACTTTTGTGTCAAAAGTAAGGCTTCAAGAAAGATGAAGAGCACCATAATCAACGTGATTAAATCAACTGAGCATGTGATGCCATGTGAAAATTTGAATTGGCGTAACCTCTTCAATTACATTAACTAG

Protein sequence

MDDVLVGGEASGMFPSVMSVLGVIVTCLRCYALNLQDGGLPDARRAEAEQNSENIALIIRKERVRKHSNAFVYRIVVDWGVSQMRCVMNFCVKSKASRKMKSTIINVIKSTEHVMPCENLNWRNLFNYIN
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh07G003230.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G003230.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G003230.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G003230.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh07G003230CmaCh07G003230gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh07G003230.1:exon:2131CmaCh07G003230.1:exon:2131exon
CmaCh07G003230.1:exon:2132CmaCh07G003230.1:exon:2132exon
CmaCh07G003230.1:exon:2133CmaCh07G003230.1:exon:2133exon
CmaCh07G003230.1:exon:2134CmaCh07G003230.1:exon:2134exon
CmaCh07G003230.1:exon:2135CmaCh07G003230.1:exon:2135exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh07G003230.1:cdsCmaCh07G003230.1:cds_5CDS
CmaCh07G003230.1:cdsCmaCh07G003230.1:cds_4CDS
CmaCh07G003230.1:cdsCmaCh07G003230.1:cds_3CDS
CmaCh07G003230.1:cdsCmaCh07G003230.1:cds_2CDS
CmaCh07G003230.1:cdsCmaCh07G003230.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh07G003230.1CmaCh07G003230.1-proteinpolypeptide