CmaCh06G005910.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTTCTTCAATTTCCTTCACCCTTACTTCTCCATTCCTCGCTTCTTCCAGGCTTCACCCCACCGCCAAACCCCTCTCCTTCTCCTTCGCTCCTCCATTCCCCAAATCCTCTTCTCCTTTCCGGACCCTTTTCCCCATTGCTTCCAATTCCTCCTCTAAACCCTCAATTCCATCTCCCATTGACTCCTCGAGTTCTTTCGCTGCCCCTTCGCTTGCCTTCAATCCAACATTGAAGTCCCGTCTCCGCAATGGCGAAACCCTCTACGGTCTCTTCCTCCTTTCCTTCTCCCCCACTCTTGCCGAGATCGCTGGTCTCTCCGGCTACGATTTCGTCGTCGTCGACATGGAGCACGGCTACGGCGGAATCTCCGATGCCCTCCCCTGTCTCCGCGCCCTCTCCGCCACTCAAACTCCAGCCATTCTCCGCATCCCCGAGAGCTCTGCCGCCTGGGCCAAAAAGGCCCTAGATTTAGGACCGCAGGGTATCATGTTTCCAATGATCGATTCGTCCAAAGAAGCCAAAAAAGCTGTTTCATATTGCAGATTCCCACCCGCCGGAGTCCGTGGATCAGCTCATCCAGTGGTTAGAGCATCGAAATACGGCATTGACGAAGGGTATTTGACAAATTACGAGGACGAATTACTGATTATGTGTCAGATTGAATCGGAGCAGGCGGTGAAGAAGATAGATGACATAATGGAAGTGGATGGGGTTGATTGCATTCAAATGGGGCCATTGGACATGAGTGGAAGCATGGGATATCTATGGGACCCTGGACATAAGAAGGTCAGAGAAATGATGAGAAAGGCAGAAAAGGCTGTTTTGGAGAGCAAAAGTAAAAGTAAAAATGGTGAGAAGGGAGCCTTCTTATGTGGGTTTTCAATGCCTCATGATGGACCAATTGACATGAGGAAGCGTGGATATCAGATGATTTCTGGGGCTGTTGATATTGGTTTGTTTAGAACTGCTGCTGTTGAGGATGTGAGGAAGTTTAGAATGAGCGAAATGGAAGACTCTGAGGATTTGGATCAGCCTCTTACTCACAAGGAAGAGGATGAAGAAGATAAGTACTGGAGCGAATGAAGAAACTTATCCTTTTTCACAATATGCTTCATCTTTTTGCCTTTTTTCTTGTTCTTTCTAGTACATAAGTAGAGCTTGGAAATGCAATTCTTGATGTGGGTATCCTTGTTCTTGTTCTTGCTCTTGTTCTTGCTCTTGTTCTTGCTCATATATGGTTATGCACTTTCTAATGCTTTCCATTTTTGTTTGTACAGACATTTTCAGTGTCCTTTTTCTTCTTCTCTGCTGGAACTTTGCCTCAGTTCTTAGTTTTTGACTTCTCTGTGCCTTTACTTTTACATCTTGATCTTGCTACAGGATTCATAATTATATTGCTATATAATATCCTTAGGCCATGTGAAAGGAGACAGGTTGGCCTTGGTACTCTCTGTTCTCATTGATCAGAATCACGTGCCATCATTGATCAATGTTTGTCTCATTTTCCCATCTTAGCCCTCTGAATTTTTATAGTCAAACCGAAATACATAATATAGATCAAGCTAGAAGTTTCAGAAGTGGGGTCATTGTGGTAAAATCCCTTCTGTTTGTGGCCTTTTTGCTCCTGCTATGTCTGCTTCCATACTTGACAGCAGCAAGCTGTGATGTAAAAACGTCCTCTTTTAAAAGGGTTCTCTTTGGCTGTCAAGAAACAGGTAGATTTGTGGAAGGGGAGGCAAAAAAAAGTGGCGGTGGTGGGTTGAGACAAGCTCTTATGGCGATTCTTGAGAGCTTTCTTAGATTTAGGTTTCTTCAGCATGTTGTGATTTTGTTGCAGATCCATAGTGTAATCTGCTATCGGTACAAAGTTGGAGATTTGGATTCTTGGGGTCTTCCCACTTCTGAAAATCCAAAGATCTATATGTATTGGTCTAAATATCACTCTCTCAAGATTGGCGATTCTCTGAGTAAGTGCATTTGTTTTTCTTCCTCTCTTAAATCTGCTGTTGCTGCTGCTTTGATTTCTGATTTCCATGGCGGTGTGTTGCAGTGTTCTTGTATCCACCAAGCCAAGATTCAGTGATTCAAGTTACAAAGGAATCTTACAACAGCTGCAATCTCAAGGATCCAATCTTGTCCATGAAAGATGGTAACTCTGTTTTCAATATCACTACTTACGAGGATCTGTTCTTCACCAGTGGAGTTGCAGGCCACTGTGAGAAGAATCAGAAGCTTCATATCTCTGTGCTTTCTGGAAATGGTTCTTCTGCAAGCGCTCCATCCTCTGATGGTGCACTTCCTGAAATCTCTCCCTCTTACCCCACTGTTTTTGGTGGAATCCCAGCAGCTCCCATGGCCAATTCCAGCGCCTCCTCTTCCTCTTTGTCAACAAAAATCTCATTTTTTCCTGCCTTGGTTGCTGCCTTTGCTGGGCTTTTGATTCTGAGCCAATGAGTTAGTTCATATATTGAGATTCATTGAGTTATAATAGTTTGAGAAATGAATTCTTTTTCACAATTATTATCCCTGCGTTGTTGTGTTCTTAGATGAGTTTGAAGTCATCTGTGTTGTTTAATGGTGTTTCCTATAAGAAATGGCTCTGATTTTCAGGTGTAAAACTCTCAGGCGGCCCTGTAGTTTTGGTCGTGTCAGTTCTAATTTTCATATGCCAGCCACCTAATACTCACAACATGGGAATCTCAACTTCGTTTCTAAATTGACCGACATATTTAATCACTCCATAAATTTGTTTTGCTTGCAATAGTCCGAAGGTCACTTGTGA ATGGCGGCTTCTTCAATTTCCTTCACCCTTACTTCTCCATTCCTCGCTTCTTCCAGGCTTCACCCCACCGCCAAACCCCTCTCCTTCTCCTTCGCTCCTCCATTCCCCAAATCCTCTTCTCCTTTCCGGACCCTTTTCCCCATTGCTTCCAATTCCTCCTCTAAACCCTCAATTCCATCTCCCATTGACTCCTCGAGTTCTTTCGCTGCCCCTTCGCTTGCCTTCAATCCAACATTGAAGTCCCGTCTCCGCAATGGCGAAACCCTCTACGGTCTCTTCCTCCTTTCCTTCTCCCCCACTCTTGCCGAGATCGCTGGTCTCTCCGGCTACGATTTCGTCGTCGTCGACATGGAGCACGGCTACGGCGGAATCTCCGATGCCCTCCCCTGTCTCCGCGCCCTCTCCGCCACTCAAACTCCAGCCATTCTCCGCATCCCCGAGAGCTCTGCCGCCTGGGCCAAAAAGGCCCTAGATTTAGGACCGCAGGGTATCATGTTTCCAATGATCGATTCGTCCAAAGAAGCCAAAAAAGCTGTTTCATATTGCAGATTCCCACCCGCCGGAGTCCGTGGATCAGCTCATCCAGTGGTTAGAGCATCGAAATACGGCATTGACGAAGGGTATTTGACAAATTACGAGGACGAATTACTGATTATGTGTCAGATTGAATCGGAGCAGGCGGTGAAGAAGATAGATGACATAATGGAAGTGGATGGGGTTGATTGCATTCAAATGGGGCCATTGGACATGAGTGGAAGCATGGGATATCTATGGGACCCTGGACATAAGAAGGTCAGAGAAATGATGAGAAAGGCAGAAAAGGCTGTTTTGGAGAGCAAAAGTAAAAGTAAAAATGGTGAGAAGGGAGCCTTCTTATGTGGGTTTTCAATGCCTCATGATGGACCAATTGACATGAGGAAGCGTGGATATCAGATGATTTCTGGGGCTGTTGATATTGGTTTGTTTAGAACTGCTGCTGTTGAGGATGTGAGGAAGTTTAGAATGAGCGAAATGGAAGACTCTGAGGATTTGGATCAGCCTCTTACTCACAAGGAAGAGGATGAAGAAGATAAGTTTCTTCAGCATGTTGTGATTTTGTTGCAGATCCATAGTGTAATCTGCTATCGGTACAAAGTTGGAGATTTGGATTCTTGGGGTCTTCCCACTTCTGAAAATCCAAAGATCTATATGTATTGGTCTAAATATCACTCTCTCAAGATTGGCGATTCTCTGATGTTCTTGTATCCACCAAGCCAAGATTCAGTGATTCAAGTTACAAAGGAATCTTACAACAGCTGCAATCTCAAGGATCCAATCTTGTCCATGAAAGATGGTAACTCTGTTTTCAATATCACTACTTACGAGGATCTGTTCTTCACCAGTGGAGTTGCAGGCCACTGTGAGAAGAATCAGAAGCTTCATATCTCTGTGCTTTCTGGAAATGGTTCTTCTGCAAGCGCTCCATCCTCTGATGGTGCACTTCCTGAAATCTCTCCCTCTTACCCCACTGTTTTTGGTGGAATCCCAGCAGCTCCCATGGCCAATTCCAGCGCCTCCTCTTCCTCTTTGTCAACAAAAATCTCATTTTTTCCTGCCTTGTCCGAAGGTCACTTGTGA ATGGCGGCTTCTTCAATTTCCTTCACCCTTACTTCTCCATTCCTCGCTTCTTCCAGGCTTCACCCCACCGCCAAACCCCTCTCCTTCTCCTTCGCTCCTCCATTCCCCAAATCCTCTTCTCCTTTCCGGACCCTTTTCCCCATTGCTTCCAATTCCTCCTCTAAACCCTCAATTCCATCTCCCATTGACTCCTCGAGTTCTTTCGCTGCCCCTTCGCTTGCCTTCAATCCAACATTGAAGTCCCGTCTCCGCAATGGCGAAACCCTCTACGGTCTCTTCCTCCTTTCCTTCTCCCCCACTCTTGCCGAGATCGCTGGTCTCTCCGGCTACGATTTCGTCGTCGTCGACATGGAGCACGGCTACGGCGGAATCTCCGATGCCCTCCCCTGTCTCCGCGCCCTCTCCGCCACTCAAACTCCAGCCATTCTCCGCATCCCCGAGAGCTCTGCCGCCTGGGCCAAAAAGGCCCTAGATTTAGGACCGCAGGGTATCATGTTTCCAATGATCGATTCGTCCAAAGAAGCCAAAAAAGCTGTTTCATATTGCAGATTCCCACCCGCCGGAGTCCGTGGATCAGCTCATCCAGTGGTTAGAGCATCGAAATACGGCATTGACGAAGGGTATTTGACAAATTACGAGGACGAATTACTGATTATGTGTCAGATTGAATCGGAGCAGGCGGTGAAGAAGATAGATGACATAATGGAAGTGGATGGGGTTGATTGCATTCAAATGGGGCCATTGGACATGAGTGGAAGCATGGGATATCTATGGGACCCTGGACATAAGAAGGTCAGAGAAATGATGAGAAAGGCAGAAAAGGCTGTTTTGGAGAGCAAAAGTAAAAGTAAAAATGGTGAGAAGGGAGCCTTCTTATGTGGGTTTTCAATGCCTCATGATGGACCAATTGACATGAGGAAGCGTGGATATCAGATGATTTCTGGGGCTGTTGATATTGGTTTGTTTAGAACTGCTGCTGTTGAGGATGTGAGGAAGTTTAGAATGAGCGAAATGGAAGACTCTGAGGATTTGGATCAGCCTCTTACTCACAAGGAAGAGGATGAAGAAGATAAGTTTCTTCAGCATGTTGTGATTTTGTTGCAGATCCATAGTGTAATCTGCTATCGGTACAAAGTTGGAGATTTGGATTCTTGGGGTCTTCCCACTTCTGAAAATCCAAAGATCTATATGTATTGGTCTAAATATCACTCTCTCAAGATTGGCGATTCTCTGATGTTCTTGTATCCACCAAGCCAAGATTCAGTGATTCAAGTTACAAAGGAATCTTACAACAGCTGCAATCTCAAGGATCCAATCTTGTCCATGAAAGATGGTAACTCTGTTTTCAATATCACTACTTACGAGGATCTGTTCTTCACCAGTGGAGTTGCAGGCCACTGTGAGAAGAATCAGAAGCTTCATATCTCTGTGCTTTCTGGAAATGGTTCTTCTGCAAGCGCTCCATCCTCTGATGGTGCACTTCCTGAAATCTCTCCCTCTTACCCCACTGTTTTTGGTGGAATCCCAGCAGCTCCCATGGCCAATTCCAGCGCCTCCTCTTCCTCTTTGTCAACAAAAATCTCATTTTTTCCTGCCTTGTCCGAAGGTCACTTGTGA MAASSISFTLTSPFLASSRLHPTAKPLSFSFAPPFPKSSSPFRTLFPIASNSSSKPSIPSPIDSSSSFAAPSLAFNPTLKSRLRNGETLYGLFLLSFSPTLAEIAGLSGYDFVVVDMEHGYGGISDALPCLRALSATQTPAILRIPESSAAWAKKALDLGPQGIMFPMIDSSKEAKKAVSYCRFPPAGVRGSAHPVVRASKYGIDEGYLTNYEDELLIMCQIESEQAVKKIDDIMEVDGVDCIQMGPLDMSGSMGYLWDPGHKKVREMMRKAEKAVLESKSKSKNGEKGAFLCGFSMPHDGPIDMRKRGYQMISGAVDIGLFRTAAVEDVRKFRMSEMEDSEDLDQPLTHKEEDEEDKFLQHVVILLQIHSVICYRYKVGDLDSWGLPTSENPKIYMYWSKYHSLKIGDSLMFLYPPSQDSVIQVTKESYNSCNLKDPILSMKDGNSVFNITTYEDLFFTSGVAGHCEKNQKLHISVLSGNGSSASAPSSDGALPEISPSYPTVFGGIPAAPMANSSASSSSLSTKISFFPALSEGHL Homology
BLAST of CmaCh06G005910.1 vs. ExPASy Swiss-Prot
Match: A6TBU6 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=rhmA PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 6.6e-35 Identity = 77/205 (37.56%), Postives = 129/205 (62.93%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy Swiss-Prot
Match: B7NN63 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) OX=585057 GN=rhmA PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34 Identity = 75/205 (36.59%), Postives = 129/205 (62.93%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy Swiss-Prot
Match: C4ZU87 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=rhmA PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34 Identity = 75/205 (36.59%), Postives = 128/205 (62.44%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy Swiss-Prot
Match: B1X8V8 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / DH10B) OX=316385 GN=rhmA PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34 Identity = 75/205 (36.59%), Postives = 128/205 (62.44%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy Swiss-Prot
Match: A8A2B1 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=rhmA PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34 Identity = 75/205 (36.59%), Postives = 128/205 (62.44%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy TrEMBL
Match: A0A6J1L0B5 (uncharacterized protein LOC111498702 OS=Cucurbita maxima OX=3661 GN=LOC111498702 PE=4 SV=1) HSP 1 Score: 702.2 bits (1811), Expect = 1.7e-198 Identity = 358/359 (99.72%), Postives = 359/359 (100.00%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy TrEMBL
Match: A0A6J1GH15 (uncharacterized protein LOC111453851 OS=Cucurbita moschata OX=3662 GN=LOC111453851 PE=4 SV=1) HSP 1 Score: 696.8 bits (1797), Expect = 7.0e-197 Identity = 355/359 (98.89%), Postives = 358/359 (99.72%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy TrEMBL
Match: A0A6J1CW99 (uncharacterized protein LOC111014812 OS=Momordica charantia OX=3673 GN=LOC111014812 PE=4 SV=1) HSP 1 Score: 581.6 bits (1498), Expect = 3.3e-162 Identity = 301/353 (85.27%), Postives = 324/353 (91.78%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy TrEMBL
Match: A0A0A0L3Q7 (HpcH_HpaI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002930 PE=4 SV=1) HSP 1 Score: 579.3 bits (1492), Expect = 1.6e-161 Identity = 298/361 (82.55%), Postives = 325/361 (90.03%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. ExPASy TrEMBL
Match: A0A5A7UCF1 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00850 PE=4 SV=1) HSP 1 Score: 578.2 bits (1489), Expect = 3.6e-161 Identity = 299/361 (82.83%), Postives = 325/361 (90.03%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. NCBI nr
Match: XP_023005809.1 (uncharacterized protein LOC111498702 [Cucurbita maxima]) HSP 1 Score: 702.2 bits (1811), Expect = 3.4e-198 Identity = 358/359 (99.72%), Postives = 359/359 (100.00%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. NCBI nr
Match: XP_022950895.1 (uncharacterized protein LOC111453851 [Cucurbita moschata]) HSP 1 Score: 696.8 bits (1797), Expect = 1.4e-196 Identity = 355/359 (98.89%), Postives = 358/359 (99.72%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. NCBI nr
Match: KAG6596679.1 (hypothetical protein SDJN03_09859, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 694.9 bits (1792), Expect = 5.5e-196 Identity = 353/359 (98.33%), Postives = 357/359 (99.44%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. NCBI nr
Match: KAG7028215.1 (rhmA, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 693.7 bits (1789), Expect = 1.2e-195 Identity = 352/359 (98.05%), Postives = 357/359 (99.44%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. NCBI nr
Match: XP_023540559.1 (uncharacterized protein LOC111800889 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 681.8 bits (1758), Expect = 4.8e-192 Identity = 349/359 (97.21%), Postives = 354/359 (98.61%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. TAIR 10
Match: AT4G10750.1 (Phosphoenolpyruvate carboxylase family protein ) HSP 1 Score: 392.5 bits (1007), Expect = 5.4e-109 Identity = 211/347 (60.81%), Postives = 260/347 (74.93%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. TAIR 10
Match: AT4G24080.1 (aldolase like ) HSP 1 Score: 238.0 bits (606), Expect = 1.7e-62 Identity = 125/262 (47.71%), Postives = 169/262 (64.50%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. TAIR 10
Match: AT1G64640.1 (early nodulin-like protein 8 ) HSP 1 Score: 147.1 bits (370), Expect = 4.0e-35 Identity = 86/164 (52.44%), Postives = 106/164 (64.63%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. TAIR 10
Match: AT3G20570.1 (early nodulin-like protein 9 ) HSP 1 Score: 95.5 bits (236), Expect = 1.4e-19 Identity = 58/175 (33.14%), Postives = 93/175 (53.14%), Query Frame = 0
BLAST of CmaCh06G005910.1 vs. TAIR 10
Match: AT4G32490.1 (early nodulin-like protein 4 ) HSP 1 Score: 86.7 bits (213), Expect = 6.4e-17 Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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