CmaCh05G009470.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh05G009470.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr05: 7637671 .. 7640548 (-)
Sequence length834
RNA-Seq ExpressionCmaCh05G009470.1
SyntenyCmaCh05G009470.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATGAACAGAAGATATGGATTTTGCAGAAACAGAAGCGGTCGGGCTGGTGACGTCTCGATCGATGTTACCGAAGGAGCCTTTTCCGGTGAGCATTTTGATAGCAATCTGAGCAACTTCGGCGAACCAGTCGTCCTCCGGCAAAGCACTGCCCACACAACAAAGGTAATGGGTAATTGTCTTTAATAATATGAGCAGAAAAAAAGATATAAAACCTGTAAGGATCTGTTCCAGTAGCAGCCAAGGATTCGATGGCTCTTGCAATGATGTTCTTGATCACTTGATGCAAATTTCGGGATAGATATCGGCCTTGTGATGCGAAAAGTATCACGAACTCCATGTCTAAGTATAGCTGCAACCAAATAATGCAAACTAATGACTTTATTTTTCGAGTTTTCTCAGGGTTTCTTCTATTAGGAATCAGAACCATAACTTCTACAATAGTACGATGTTGTCTCCTTTGAACAGAAGTTTTAGTGGTTTTGCTTTTAGTTTTCTCAAAAGGCCTCGTACCCTTTGAACAGAAGTTTTAGTGGTTTTGCTTTTAGTTTTCTCAAAAGGCCTCGTACCAATGGAGATAATATTTCTTATTTATAAACTCAGGATCATTCCCTTAATTAGTTAATGTTTCGAACAAAATACACCATAGAGTCTCGAGAGGCCAGCTTCTCTAGAGCCCTCGAATAAAATACATCATTTGTTCGATACTTGAGTCATCTTTGACTATACCTTTGAGACTTGCAACTTCTTTGTTCGGCACCTGAGGATTCTATTGACATGACTAATTTAACGATGTGACTCTAATACCATTTTAGGAACCTCGATCTCCACAAGGTATAATATTGTCCACTTTGAACATAAACTCTCGTAGTTTTGTTTTTGGTTTTCCCAAAATGTCAACGGATATAACATTCCTTACAGGGTGGAACTACTCATTTCAATAATCCTCAACATCTACTAGACGGAGAAATTTGAATTTTTCAGGTCTGATCGAATCTAAATCTTCACATATTTATATGGAGAGAGAACGTGGACGAGAACGAGAACGAGGATGCCATTTCTAAGCCTACACCATACCTCGTGAACATCTTTAAACTTGAATTGTCTAGGCATAGTCTCAATTAACGTATTTTCTCAAATAATTTTTTAGGAAAAAAAAAAAAGTAGTTTTAAATTTAAATTATTATTAATTTTAATCAGCTAAAAATTTAAAAAATAAATAAAAAGAAAAAAGAGCTTACTTGCTGAAGGCCGAAAGGGCCCAAAGGGCGAGGCCCAACCTCTATTTCTTCCCAGAAGGCTTGATCTTCAGAAAGCCATAATATCACTGTTTCAGTGAGTCTCATGAGAAGAACAGTCGCAAATCTCTCCCTTCCCACGAACATCTCTGTCGCAATCCCTGCAATCAGCGTCAATTTCGCGAAAAGCGCCTGAAACCGACCGGCAAGCAATCAGGTTTCTTCGATTCCCCTCTTTTGATTTCGAATTCATCTAAGATAGATAGATAGATAGTCACCTGAAATATCTGCGATGGAAACCACTCCGGCTCTTCTGCATTTCCATTCCCGTCCATCGACAGGTACACCTGTGCATTCAGCCGCGTATCGCCGTCTTCCGTGAAGATCAGTTCTAGAGCATGTTGGCGGCAGAAGCTGTCCCTCAGTCGATCCACCGACCGCTGTAGTCTCCTCTTCCACTCTCTCTGCTCCGGCAGCCGGCTCGATGTTTTCCTTGGCGTTTCTGATCTGTTCTGTGGAAATATCTTGGACGCCGCTCGAGGAAGCAACTCATCGGCCAGTAACGACGCGTTCGCTAGCAGCGCTATCTGTTGCGGTTCGGTCTCCGCCAGCCGTACGATCTTCGTCGCTGATCCTTCCAGATTCATCTCGTTTTCCACTGAACTTGACAGAGCTGTTATGAGCAAATTGATGTAAGAGTTGAATACTTGCAGAACTCCTTCCAAGGTTAGTGAATCCAATTGCAGGCTTTCAAGTGATCCCATGTCCTCTACAAATTCCTGATATCATACTTCATTTTTCAGATTCAAGCAGAACTTAAAATACTTAACCTACTACCTTGTGAATCGCTGATCAGATCAGTGACAGAAATACTTCAAAACTGGGCTCGACATTAAGTCACTTTTGACTACACTTTCGCGACTCACAACTTCTTTGTTCGACATTTGAGGATTTTATTGATATGGTTAAGTTAAGAGTATGACTCTGATATCATGTTAGGAATCACGAATCTCCACAATGGTATGATTGTCCACTTTGAGTATTAGCTCTCATGGCTTTGCTTTTGGTTTTTTCAGAAGGCATCATACCAATGGAGATGTATTTCTTATTTATAAACTCATGATCAATGCTTAATTAGCCACATTCCTCTCCCAACCATCCTCAACACGTAACTCATCTCTTGCTTGTAAATTAAAGAACGACAATATGAATCCCATAGAATCATTACCTGAACCATTGTGTTGAATCTATGTGCACTTCTTGAAAGCTTTGGCTGTGAGACGACACTGCTCAGTGACGAAGTTGAAGACGACCCCGGGAAAAATCGAGAAGAAAGGGGGGAATAAGCAAGCAACCAATCATCTGATGCAGCCAAGGCAGCACTGGTCTGTTCAATTCTCCTCAAATTAGCGGTTATAGCATGCTCAATGAAGGGCCTGAAGTGTCTGAATAACACTGGCGTCAGGGCCAACCCACGAGCCTCCAGAAGAGAGCAATGCCCCATACATATCTGCACACACTCAGCTGCAATTCTCATGCTCCCCACAGCAGCCGATGAAGCTATGACATACCTTTTCAGGAACATAGCAAAAGAATCCGTTTGTCTCACAGACCAAGTTACCAACTCCGAGGCATAA

mRNA sequence

ATGAGAATGAACAGAAGATATGGATTTTGCAGAAACAGAAGCGGTCGGGCTGGTGACGTCTCGATCGATGTTACCGAAGGAGCCTTTTCCGGTGAGCATTTTGATAGCAATCTGAGCAACTTCGGCGAACCAGTCGTCCTCCGGCAAAGCACTGCCCACACAACAAAGTCGCAAATCTCTCCCTTCCCACGAACATCTCTGTCGCAATCCCTGCAATCAGCGTCAATTTCGCGAAAAGCGCCTGAAACCGACCGGCAAGCAATCAGGTACACCTGTGCATTCAGCCGCGTATCGCCGTCTTCCGTGAAGATCAGTTCTAGAGCATGTTGGCGGCAGAAGCTGTCCCTCAGTCGATCCACCGACCGCTGTAGTCTCCTCTTCCACTCTCTCTGCTCCGGCAGCCGGCTCGATGTTTTCCTTGGCGTTTCTGATCTGTTCTGTGGAAATATCTTGGACGCCGCTCGAGGAAGCAACTCATCGGCCAGTAACGACGCGTTCGCTAGCAGCGCTATCTGTTGCGGTTCGGTCTCCGCCAGCCGTACGATCTTCGTCGCTGATCCTTCCAGATTCATCTCGTTTTCCACTGAACTTGACAGAGCTGTTATGAGCAAATTGATAACTCCTTCCAAGGGCCTGAAGTGTCTGAATAACACTGGCGTCAGGGCCAACCCACGAGCCTCCAGAAGAGAGCAATGCCCCATACATATCTGCACACACTCAGCTGCAATTCTCATGCTCCCCACAGCAGCCGATGAAGCTATGACATACCTTTTCAGGAACATAGCAAAAGAATCCGTTTGTCTCACAGACCAAGTTACCAACTCCGAGGCATAA

Coding sequence (CDS)

ATGAGAATGAACAGAAGATATGGATTTTGCAGAAACAGAAGCGGTCGGGCTGGTGACGTCTCGATCGATGTTACCGAAGGAGCCTTTTCCGGTGAGCATTTTGATAGCAATCTGAGCAACTTCGGCGAACCAGTCGTCCTCCGGCAAAGCACTGCCCACACAACAAAGTCGCAAATCTCTCCCTTCCCACGAACATCTCTGTCGCAATCCCTGCAATCAGCGTCAATTTCGCGAAAAGCGCCTGAAACCGACCGGCAAGCAATCAGGTACACCTGTGCATTCAGCCGCGTATCGCCGTCTTCCGTGAAGATCAGTTCTAGAGCATGTTGGCGGCAGAAGCTGTCCCTCAGTCGATCCACCGACCGCTGTAGTCTCCTCTTCCACTCTCTCTGCTCCGGCAGCCGGCTCGATGTTTTCCTTGGCGTTTCTGATCTGTTCTGTGGAAATATCTTGGACGCCGCTCGAGGAAGCAACTCATCGGCCAGTAACGACGCGTTCGCTAGCAGCGCTATCTGTTGCGGTTCGGTCTCCGCCAGCCGTACGATCTTCGTCGCTGATCCTTCCAGATTCATCTCGTTTTCCACTGAACTTGACAGAGCTGTTATGAGCAAATTGATAACTCCTTCCAAGGGCCTGAAGTGTCTGAATAACACTGGCGTCAGGGCCAACCCACGAGCCTCCAGAAGAGAGCAATGCCCCATACATATCTGCACACACTCAGCTGCAATTCTCATGCTCCCCACAGCAGCCGATGAAGCTATGACATACCTTTTCAGGAACATAGCAAAAGAATCCGTTTGTCTCACAGACCAAGTTACCAACTCCGAGGCATAA

Protein sequence

MRMNRRYGFCRNRSGRAGDVSIDVTEGAFSGEHFDSNLSNFGEPVVLRQSTAHTTKSQISPFPRTSLSQSLQSASISRKAPETDRQAIRYTCAFSRVSPSSVKISSRACWRQKLSLSRSTDRCSLLFHSLCSGSRLDVFLGVSDLFCGNILDAARGSNSSASNDAFASSAICCGSVSASRTIFVADPSRFISFSTELDRAVMSKLITPSKGLKCLNNTGVRANPRASRREQCPIHICTHSAAILMLPTAADEAMTYLFRNIAKESVCLTDQVTNSEA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh05G009470CmaCh05G009470gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh05G009470.1:exon:2949CmaCh05G009470.1:exon:2949exon
CmaCh05G009470.1:exon:2948CmaCh05G009470.1:exon:2948exon
CmaCh05G009470.1:exon:2947CmaCh05G009470.1:exon:2947exon
CmaCh05G009470.1:exon:2946CmaCh05G009470.1:exon:2946exon
CmaCh05G009470.1:exon:2945CmaCh05G009470.1:exon:2945exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh05G009470.1:cdsCmaCh05G009470.1:cds_5CDS
CmaCh05G009470.1:cdsCmaCh05G009470.1:cds_4CDS
CmaCh05G009470.1:cdsCmaCh05G009470.1:cds_3CDS
CmaCh05G009470.1:cdsCmaCh05G009470.1:cds_2CDS
CmaCh05G009470.1:cdsCmaCh05G009470.1:cdsCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh05G009470.1CmaCh05G009470.1-proteinpolypeptide