CmaCh04G024500.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G024500.1
TypemRNA
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr04: 16851218 .. 16853286 (+)
Sequence length207
RNA-Seq ExpressionCmaCh04G024500.1
SyntenyCmaCh04G024500.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCGCTCTCTCTAACCTTCCTTCCAAACTTCTGCTTCGTCAGCTAATAGAGGAGGACCATAACTTAACGGTCAGCTGTTCAAGGGTATTTTTGTAAATTCACTTTCTAAAGATAATATATTTATTTTTTTCTATAGATGTAATTATTATCTCTATCATATCACCATAACTGTCTTCTCCATCTATTTCTAAAAAGAAAATGTAATAAAAGTTTAAGGGGAGGAACCAAATAGTTTAACAGAATTTCCCTAAAAAAAATGTTTTGTTTTGTTCTTTATTATACGAAAAAAATAATTTTAATTAGTAACTATGAAGATAAAAGATTCAAACTTTCAACTTTTAGCTCGAGAAATTAATGAAATTAATGAAATTTTGAGAATTTATAGAGGGATTTGTTTGGGTAAGAAACTATTTATTATTAAATTGTTTAATTGAACGGGAGACAAAAAAAAGTAAATTAAAGAAGAAACTTTATTGAATTGTAGACATATACAGGTCATGGGTTCGATCCAAGAGAAAGGAATTGAAGTCCGGTCTTGAAGAGAGAGAGAGCAAAAAGTTGGGGCTCTGCTGGGTTCCCTTCGAAGCTAAAGAAGAAACGGTGAGTAGTAACTTGCCTTTTCGCTTAAGCAATGGCCGCCTTCTACTGCTCGCATTTTTTCTTGTTTTACTGAACGAATTTATCGTTTTCTAGAGATGGGGTTTCCTAATTTCCTTTTCTTCTGTTCTTGATTCTGTGTTTCCTCTGCGATAACATCTTCAAATCTTCATGACCCATGTGTTTTTTTTGCTCTAATCACTGAATTTTCCATCTCAATTCCTTGTGGGGTTTCTTATCTTTTTGTTATCAATTGATTTTGCTGTAAGAAGTTTATGTGATTCTGGTTTATGGAGGTTCTTAGCGGGTTATCTTCAACTGGGTCCTGCCCCAATCCAAAGCTTGTGCAATTGTTCTTCATTTGCTGGTATCTGAGCCTTTTTTCTTTCATTTGTATTGGAATTCTCTAGCTGTTTTTCTTGAATTTATACTCTTTGATCTTGAATTTATGGTTTCTTAGATTAGTTTGTGTTTAGAAGCTAGCATTGTTGCTGGGTTTTGTTGCTAGGCTTTGATCTTTTCCTTTTCTTGTGTGTTCCTTGTTGATCTGTGGAAGATTTAGTGGTAAAACAATGTATCTGTGATCATCACTGAGGTTTGCTTATCTTTTCCATCGTTTTCTTCTTCAAATTATTGGATTATTGAATCAGAGTAAAGAACACTATACCCAATGTTGGAGTTTTCTTGACTCTTAAACCTCTGGGAAAGCTCTTATTGGAAAGAAAACTGTGCGAGGTGGGAAATTTGACGATATTGTGCTGGATGCTCCTTTTGAAGCGTTAGAATGTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACCTTGCTTATAAGAGTGTAGAAGCCTCTCCCTACAAACACGTTTTAAAGAAGCCCTAAGAGGACAATGTCTACTAGTAGTAGGTTTTGGCTGTTGCAAATGGTATCAAAGTCAAACACCAGGCGGTATGCTAACGAGAACGTTGGGCCCCTAAGGAGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTGCTTATAAGGGTGTGGAAACCTCTCCCTACAGACACATTTTAAAATCTTGAGGGAAAGCCCGGAAGGGAAAGTCCAAAGAGAACAATATTTGCTCGTTCTTGGTTGTAATAAGATTCCATATTTGAATTAAATGGTACTATAGAAAGTTTGGTATCAAGCAATGGTAATTTGGTTTTGTGTCAAAATTGAGAGAGCCAACCAAAAGAGTGGTATTTTATGCTGCTTTAGGGGTCCATCTTTAGTTTGCTTTTGTTCTTTTGAAGAATCTTCTTTCCTTGCTTTTTGCTTTATTCAACCCATCTCCTTCCCTTTCTTTCTTGTTTATTAAGTATGGTTAATCGAAATTAATCGACGTTTAGTGAATTTGCAGATGGATTTCTTGTCGTTCTTCAACCGCCTTTTTGTTCGTACTCTCTCCTCAAAGATACATCAACACGATTAG

mRNA sequence

ATGCGCGCTCTCTCTAACCTTCCTTCCAAACTTCTGCTTCGTCAGCTAATAGAGGAGGACCATAACTTAACGCGGGTTATCTTCAACTGGGTCCTGCCCCAATCCAAAGCTTGTGCAATTGTTCTTCATTTGCTGATGGATTTCTTGTCGTTCTTCAACCGCCTTTTTGTTCGTACTCTCTCCTCAAAGATACATCAACACGATTAG

Coding sequence (CDS)

ATGCGCGCTCTCTCTAACCTTCCTTCCAAACTTCTGCTTCGTCAGCTAATAGAGGAGGACCATAACTTAACGCGGGTTATCTTCAACTGGGTCCTGCCCCAATCCAAAGCTTGTGCAATTGTTCTTCATTTGCTGATGGATTTCTTGTCGTTCTTCAACCGCCTTTTTGTTCGTACTCTCTCCTCAAAGATACATCAACACGATTAG

Protein sequence

MRALSNLPSKLLLRQLIEEDHNLTRVIFNWVLPQSKACAIVLHLLMDFLSFFNRLFVRTLSSKIHQHD
Homology
The following BLAST results are available for this feature:
BLAST of CmaCh04G024500.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G024500.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G024500.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G024500.1 vs.
Match NameE-valueIdentityDescription
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmaCh04G024500CmaCh04G024500gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh04G024500.1:exon:558CmaCh04G024500.1:exon:558exon
CmaCh04G024500.1:exon:559CmaCh04G024500.1:exon:559exon
CmaCh04G024500.1:exon:560CmaCh04G024500.1:exon:560exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmaCh04G024500.1:cdsCmaCh04G024500.1:cdsCDS
CmaCh04G024500.1:cdsCmaCh04G024500.1:cds_2CDS
CmaCh04G024500.1:cdsCmaCh04G024500.1:cds_3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmaCh04G024500.1CmaCh04G024500.1-proteinpolypeptide