CmaCh04G004110.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAGCGACCTGGCCGCGACCTGGCCGCGACCTGGCCGCCAAAACCTTCAATTGTAAGTCCCATTGGAGAAAAGATTTTATAAAGGATCCAAGTCCTAGCGCAATAGACTGGAATCTCGTCTGCTTATCTATCAACAAATTGTTTAAAAATTGTTCGTGCCTGGAGGTGATCCAAACGTTCTTATACAGCACTGCAATTCGATTCCAAATAGTTTCAAACTTACCAACGTGGCTATGAGAAGGAAGCTTCCTCGAAAGACGACAGCCAGAAGAACAGGTCTTGTTTAATCATCTCTGTCAATCACGGAGCATTTCATATTGGTGAAAGTCCACGTGTGTGTTGAATTTTCGCATCGATTTCATGTTTCGTAACCTACCTGGTGGTTGAATGGCCTTTGACAAGGCTGTGAAGGTAGTTTTCGAAATTTGGTAATTCGCCTTTTCGATTTTCTTTTTTTCTTTCAAATTTTCTGCTCGATGTTTTCGGGATAGGGTTTTCGAGTCATATCAGGGGGTAATTCTGTTTGATTTCTGATTCCATTGTATAATATATCTAATTTGTTATTCTGGTTGCTCTAGTGATTTCAAACTGCGATTCTTCTTAACTCGTTATTCCATTGATTCCCTGCTGGTACCTTCGAAAATGGTTCATAAGGGTTGTGGAATCTTGCTTTATTCAAGATAGGGGCAAGTGTTTTTTGTTGCCTTTTTCATTGGGTTATGTTTCTCTCGGCCTTTGTGTTTAGATCTAAGTGGAGTGACGGTTGTATGTCAAAATTAATGGGGGGAAATTAGAACAGTTTGCTTGAATTTGGTTTGATGGGGATTTTGATTTGTGGTATTTGAAATTCCAGAACAAATACATGGAGCTTGCTAATGCGGAGACTGTTGCCAATGGGGAATTGGATGGAATGGAAAGAGAGCCTTCAGCGCGCCTTCTTTTGCGGGAGGCTGGTCTGTCCCGTACGCATTTTCCGGGAATGGTGAGGAAGAGAGCATATATATTTGATGGAAATGGCAACTATTATAACAAGGAATGGGATCTTACTGAGGGTAGAGGAAAGGAGTTTTGTTGGTATCATGTAGAACTTCCGAAAGGCAATCAAAAACTGGCCCAATCTGCTCAGTTTCTCATTGATGTTCTTTGCCCGCCTTTGAAGCTTCAAGATATTCTCTCCCTTGTAAGCAATGGTCCCTTTTGTGGACATGTTGATGGGGCTCTTGTCTTCAGAGTAAATTCACCTGGCCCTGCATCTTGTGACTTTACATTCAGAATTGCTGCTAGAATTACCGAGCATTCTGTCATCACCGTGTCATTGGGACGTGTTCCGAGATTAGGATTCTCACCGGTCGGTCAGTCTCTTCTCTCGGAGGTTCCTAGTGTGGAGAGTCCCTCTCACTTAAGAGGTGAGCAGAGAGAAAGTGGGAGCATTGTGATTAGGGAGCATGTTCTTGAATTCCTTTTGACAATGAATCACTCAGAGGAGGCTGATAATCCGGTGCCAGCGTCCCTCTCAAATCTGGTTGTTCATATTATCGATACACACATGGATCATCTTCAAGATGTTGTGACGAAGCTCGAGATTGAGTTGGATTCTGTGGAGCTTGAAATGGATAGAGGTACTTATAGTTCTTTCTTTTTCTTGCTAAGAGTATAATATAGATGCTCTTGTAGATACAGAATCATTGGCCAGATGAAATATTTTTGTCAAGAACTTGATGTGTAAATGTATCATTCTCTAAAAGTCGAGTACCATAAGTCGATTTGCTTTAAAAAAAACAAATATTTTGAGTACCATAAGTCTATCATAATAGAAGTCTTCCATTGTTGTTAGGTGGATTCGCTTTAAAAAAACAAATGCTCGATGACCGAAGATTCCCCAAAATGAACCTCAACTTGCAGCGGCTCCTGCAGGTAGCATCTCAGTTCATTTTCTCAGCTACTCTCTCCTGTTTTCCTAGACTATGGCAAACCGGAGCTTTCAGAGTTGTGTTTGTTTGAGTTTTTTTAATATGTTGCTGAACTCTGGAAAGTCTTATCTATTTATGCCTTTGAAGTGTACATTTTGTGTCAAATTGGTCCATCTCGTTAACTCATAAGTTTAGCACATGTGTCGCAACGTCAGCCTACTATATTAATCTTCAAAGGCATATAGAAACTTTTTAAAATATAGGAACGACATAGACCACAACCTTGAAAATTAAGAAGTTTTTTGAAACATAATTAGATACCATCCTAAAAGTTTATGGACTAAACTTGTAATTTAACCAATTTCACGAGAGTTTTGAAAAGAAAAATGATTACACGAGGTAACATTGTACCTGGTTTTAGACTCTTTGGTACTTGATCAACAACGGTCTGTGGATGTCAGATATTCTTCATAAATGACTTAGTGTGTCTACCTACCATAACCTGACTGTTGACCTCTTGCTTTGCTCGTCAAGGAATAAGTGACTTGAAAACCGAGTCTCTGTTGCCATAACATAGAGAATGAATTTTTGTATAAATAGAAAATGGATTGAATATTGGAAGAAGATGTTTGGGTATTAGTGGAATCGTCTTCACACGTTTTAATCTACTCTTACGTACTCATCTTTTTGTATGCGTTTTGATTGAGCGCAGGTGATTGCACATGGGGAACAAGTCTTTCCACGAGTGAAAGAAAAGTGTTCTTCTAAACATTGGTTTGCCAGTGAAGACATCAGCTTGCTCGAGGAATTAATTGGACGTTTAAGACGATTGAAAGAGAATGTTGGATTCATTGCAAACCGTGTCACCGCTATTCAGGCTGGTCTCGATAGTTGGCAAGCTGAGCAAATTAACAAGAAACTCTATTATCTATCGTTTCTTTCAATCATATTCTTACCTTTATCTGTCATAACTGGAGGTACTGACCTCTTTTTGAAAATAGTTTTTAATTTCAGTTTTCACCAAGATCTGTTTGACGAAACTCATCCTAGTGTCTCGGAACCACCCTTGCAGTATTCGGCATGAATGTTGGTGGAGTACCATGGACCGATCAGAGAAATCCAGAGTTGAAAGACGGGTTTCGTAACGTCATGTTTCTTTGTGTCGCAATGCTACTACTCGTGTTGCTCTGCTTCAGTTTCCCAGCTCTTTATACCTACATAGCAGCATGGCATCGGCGGAGGAAGATGAGAAGGAGCTGGTCTCTCAACAGAAAGTCCTTTCTGAAGAGAACTATGAGAAATGGGGATGATAACAGGGGAGGAGGTTATCTTCGGATTTGATGATAAGCCATCCTCACTGAACGACATGACTTTTGTGAACCCAGCATCTCGGTCTCGATCTCGATCCCAGATGATCTAAGTCAAACCATTGATCTACATAATCGTACATCGCTACTGTATCGTCCTCCCGTTCCCTGGGAGACTTGCTTAAAAGAATTTGGTTGCAGTTTGTTTCAGGTCAATGAGGTTAGCCAGTCTTATCCTAACATGTTTTTTTTTCACATATGTAAGCTTTTGACGTGTACAGTTTGTTTTATTTTCTTCTTCCTTTTTCACTCTCAGAGATTTGTATGGAAACACTGTTAAGCATTGTTTATTTCTGGCAAGCACCAATGCTTTTATCAGTTCCTTCTCAAGTACTCACGCTGCTATACTTGACATTCATGGAGGATATATTCTGGTGTTATTGAGCTAGTTGAAAAATGTAAACACGGTGTTTTCAGTAAGTGTTAGTATACAGATGTTGTAAAACAATGTACCAAATGCTCTAATCCTTTTTTTATCACCAAGTTTTTATGACAATTTAAACATAATATTTGATAGGGAGTCCGAGGTCGAATCAATACCTTACATTTAACATTCACGTATGATGCTCATTCGGC ATGGACAGCGACCTGGCCGCGACCTGGCCGCGACCTGGCCGCCAAAACCTTCAATTTTTCAAACTTACCAACGTGGCTATGAGAAGGAAGCTTCCTCGAAAGACGACAGCCAGAAGAACAGATCTAAGTGGAGTGACGGTTAACAAATACATGGAGCTTGCTAATGCGGAGACTGTTGCCAATGGGGAATTGGATGGAATGGAAAGAGAGCCTTCAGCGCGCCTTCTTTTGCGGGAGGCTGGTCTGTCCCGTACGCATTTTCCGGGAATGGTGAGGAAGAGAGCATATATATTTGATGGAAATGGCAACTATTATAACAAGGAATGGGATCTTACTGAGGGTAGAGGAAAGGAGTTTTGTTGGTATCATGTAGAACTTCCGAAAGGCAATCAAAAACTGGCCCAATCTGCTCAGTTTCTCATTGATGTTCTTTGCCCGCCTTTGAAGCTTCAAGATATTCTCTCCCTTGTAAGCAATGGTCCCTTTTGTGGACATGTTGATGGGGCTCTTGTCTTCAGAGTAAATTCACCTGGCCCTGCATCTTGTGACTTTACATTCAGAATTGCTGCTAGAATTACCGAGCATTCTGTCATCACCGTGTCATTGGGACGTGTTCCGAGATTAGGATTCTCACCGGTCGGTCAGTCTCTTCTCTCGGAGGTTCCTAGTGTGGAGAGTCCCTCTCACTTAAGAGGTGAGCAGAGAGAAAGTGGGAGCATTGTGATTAGGGAGCATGTTCTTGAATTCCTTTTGACAATGAATCACTCAGAGGAGGCTGATAATCCGGTGCCAGCGTCCCTCTCAAATCTGGTTGTTCATATTATCGATACACACATGGATCATCTTCAAGATGTTGTGACGAAGCTCGAGATTGAGTTGGATTCTGTGGAGCTTGAAATGGATAGAGGTGGATTCGCTTTAAAAAAACAAATGCTCGATGACCGAAGATTCCCCAAAATGAACCTCAACTTGCAGCGGCTCCTGCAGGTGATTGCACATGGGGAACAAGTCTTTCCACGAGTGAAAGAAAAGTGTTCTTCTAAACATTGGTTTGCCAGTGAAGACATCAGCTTGCTCGAGGAATTAATTGGACGTTTAAGACGATTGAAAGAGAATGTTGGATTCATTGCAAACCGTGTCACCGCTATTCAGGCTGGTCTCGATAGTTGGCAAGCTGAGCAAATTAACAAGAAACTCTATTATCTATCGTTTCTTTCAATCATATTCTTACCTTTATCTGTCATAACTGGAGTATTCGGCATGAATGTTGGTGGAGTACCATGGACCGATCAGAGAAATCCAGAGTTGAAAGACGGGTTTCGTAACGTCATGTTTCTTTGTGTCGCAATGCTACTACTCGTGTTGCTCTGCTTCAGTTTCCCAGCTCTTTATACCTACATAGCAGCATGGCATCGGCGGAGGAAGATGAGAAGGAGCTGGTCTCTCAACAGAAAGTCCTTTCTGAAGAGAACTATGAGAAATGGGGATGATAACAGGGGAGGAGGTTATCTTCGGATTTGATGATAAGCCATCCTCACTGAACGACATGACTTTTGTGAACCCAGCATCTCGGTCTCGATCTCGATCCCAGATGATCTAAGTCAAACCATTGATCTACATAATCGTACATCGCTACTGTATCGTCCTCCCGTTCCCTGGGAGACTTGCTTAAAAGAATTTGGTTGCAGTTTGTTTCAGGTCAATGAGAGATTTGTATGGAAACACTGTTAAGCATTGTTTATTTCTGGCAAGCACCAATGCTTTTATCAGTTCCTTCTCAAGTACTCACGCTGCTATACTTGACATTCATGGAGGATATATTCTGGTGTTATTGAGCTAGTTGAAAAATGTAAACACGGTGTTTTCAGTAAGTGTTAGTATACAGATGTTGTAAAACAATGTACCAAATGCTCTAATCCTTTTTTTATCACCAAGTTTTTATGACAATTTAAACATAATATTTGATAGGGAGTCCGAGGTCGAATCAATACCTTACATTTAACATTCACGTATGATGCTCATTCGGC ATGGACAGCGACCTGGCCGCGACCTGGCCGCGACCTGGCCGCCAAAACCTTCAATTTTTCAAACTTACCAACGTGGCTATGAGAAGGAAGCTTCCTCGAAAGACGACAGCCAGAAGAACAGATCTAAGTGGAGTGACGGTTAACAAATACATGGAGCTTGCTAATGCGGAGACTGTTGCCAATGGGGAATTGGATGGAATGGAAAGAGAGCCTTCAGCGCGCCTTCTTTTGCGGGAGGCTGGTCTGTCCCGTACGCATTTTCCGGGAATGGTGAGGAAGAGAGCATATATATTTGATGGAAATGGCAACTATTATAACAAGGAATGGGATCTTACTGAGGGTAGAGGAAAGGAGTTTTGTTGGTATCATGTAGAACTTCCGAAAGGCAATCAAAAACTGGCCCAATCTGCTCAGTTTCTCATTGATGTTCTTTGCCCGCCTTTGAAGCTTCAAGATATTCTCTCCCTTGTAAGCAATGGTCCCTTTTGTGGACATGTTGATGGGGCTCTTGTCTTCAGAGTAAATTCACCTGGCCCTGCATCTTGTGACTTTACATTCAGAATTGCTGCTAGAATTACCGAGCATTCTGTCATCACCGTGTCATTGGGACGTGTTCCGAGATTAGGATTCTCACCGGTCGGTCAGTCTCTTCTCTCGGAGGTTCCTAGTGTGGAGAGTCCCTCTCACTTAAGAGGTGAGCAGAGAGAAAGTGGGAGCATTGTGATTAGGGAGCATGTTCTTGAATTCCTTTTGACAATGAATCACTCAGAGGAGGCTGATAATCCGGTGCCAGCGTCCCTCTCAAATCTGGTTGTTCATATTATCGATACACACATGGATCATCTTCAAGATGTTGTGACGAAGCTCGAGATTGAGTTGGATTCTGTGGAGCTTGAAATGGATAGAGGTGGATTCGCTTTAAAAAAACAAATGCTCGATGACCGAAGATTCCCCAAAATGAACCTCAACTTGCAGCGGCTCCTGCAGGTGATTGCACATGGGGAACAAGTCTTTCCACGAGTGAAAGAAAAGTGTTCTTCTAAACATTGGTTTGCCAGTGAAGACATCAGCTTGCTCGAGGAATTAATTGGACGTTTAAGACGATTGAAAGAGAATGTTGGATTCATTGCAAACCGTGTCACCGCTATTCAGGCTGGTCTCGATAGTTGGCAAGCTGAGCAAATTAACAAGAAACTCTATTATCTATCGTTTCTTTCAATCATATTCTTACCTTTATCTGTCATAACTGGAGTATTCGGCATGAATGTTGGTGGAGTACCATGGACCGATCAGAGAAATCCAGAGTTGAAAGACGGGTTTCGTAACGTCATGTTTCTTTGTGTCGCAATGCTACTACTCGTGTTGCTCTGCTTCAGTTTCCCAGCTCTTTATACCTACATAGCAGCATGGCATCGGCGGAGGAAGATGAGAAGGAGCTGGTCTCTCAACAGAAAGTCCTTTCTGAAGAGAACTATGAGAAATGGGGATGATAACAGGGGAGGAGGTTATCTTCGGATTTGA MDSDLAATWPRPGRQNLQFFKLTNVAMRRKLPRKTTARRTDLSGVTVNKYMELANAETVANGELDGMEREPSARLLLREAGLSRTHFPGMVRKRAYIFDGNGNYYNKEWDLTEGRGKEFCWYHVELPKGNQKLAQSAQFLIDVLCPPLKLQDILSLVSNGPFCGHVDGALVFRVNSPGPASCDFTFRIAARITEHSVITVSLGRVPRLGFSPVGQSLLSEVPSVESPSHLRGEQRESGSIVIREHVLEFLLTMNHSEEADNPVPASLSNLVVHIIDTHMDHLQDVVTKLEIELDSVELEMDRGGFALKKQMLDDRRFPKMNLNLQRLLQVIAHGEQVFPRVKEKCSSKHWFASEDISLLEELIGRLRRLKENVGFIANRVTAIQAGLDSWQAEQINKKLYYLSFLSIIFLPLSVITGVFGMNVGGVPWTDQRNPELKDGFRNVMFLCVAMLLLVLLCFSFPALYTYIAAWHRRRKMRRSWSLNRKSFLKRTMRNGDDNRGGGYLRI Homology
BLAST of CmaCh04G004110.1 vs. ExPASy Swiss-Prot
Match: Q6D5P8 (Zinc transport protein ZntB OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=zntB PE=3 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.8e-11 Identity = 73/300 (24.33%), Postives = 135/300 (45.00%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy Swiss-Prot
Match: A1JNE0 (Zinc transport protein ZntB OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=zntB PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 2.4e-10 Identity = 55/199 (27.64%), Postives = 98/199 (49.25%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy Swiss-Prot
Match: C6DJ80 (Zinc transport protein ZntB OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=zntB PE=3 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 5.3e-10 Identity = 73/300 (24.33%), Postives = 134/300 (44.67%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy Swiss-Prot
Match: Q7N3Y5 (Zinc transport protein ZntB OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=zntB PE=3 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.0e-09 Identity = 58/212 (27.36%), Postives = 102/212 (48.11%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy Swiss-Prot
Match: A7FHP6 (Zinc transport protein ZntB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) OX=349747 GN=zntB PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.4e-09 Identity = 54/199 (27.14%), Postives = 97/199 (48.74%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy TrEMBL
Match: A0A6J1JB43 (uncharacterized protein LOC111484180 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484180 PE=4 SV=1) HSP 1 Score: 924.5 bits (2388), Expect = 1.9e-265 Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy TrEMBL
Match: A0A6J1FS70 (uncharacterized protein LOC111447682 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447682 PE=4 SV=1) HSP 1 Score: 921.0 bits (2379), Expect = 2.2e-264 Identity = 457/459 (99.56%), Postives = 458/459 (99.78%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy TrEMBL
Match: A0A6J1JG31 (uncharacterized protein LOC111484180 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484180 PE=4 SV=1) HSP 1 Score: 917.5 bits (2370), Expect = 2.4e-263 Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy TrEMBL
Match: A0A6J1FPR3 (uncharacterized protein LOC111447682 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447682 PE=4 SV=1) HSP 1 Score: 914.1 bits (2361), Expect = 2.6e-262 Identity = 454/456 (99.56%), Postives = 455/456 (99.78%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. ExPASy TrEMBL
Match: A0A1S3BYR1 (zinc transport protein ZntB isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494851 PE=4 SV=1) HSP 1 Score: 872.5 bits (2253), Expect = 8.8e-250 Identity = 432/459 (94.12%), Postives = 448/459 (97.60%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. NCBI nr
Match: XP_022986436.1 (uncharacterized protein LOC111484180 isoform X1 [Cucurbita maxima]) HSP 1 Score: 924.5 bits (2388), Expect = 4.0e-265 Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. NCBI nr
Match: XP_022942734.1 (uncharacterized protein LOC111447682 isoform X1 [Cucurbita moschata] >KAG6600254.1 hypothetical protein SDJN03_05487, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 921.0 bits (2379), Expect = 4.4e-264 Identity = 457/459 (99.56%), Postives = 458/459 (99.78%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. NCBI nr
Match: XP_023547477.1 (uncharacterized protein LOC111806407 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 919.8 bits (2376), Expect = 9.9e-264 Identity = 456/459 (99.35%), Postives = 458/459 (99.78%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. NCBI nr
Match: KAG7030912.1 (zntB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 919.1 bits (2374), Expect = 1.7e-263 Identity = 456/459 (99.35%), Postives = 457/459 (99.56%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. NCBI nr
Match: XP_022986454.1 (uncharacterized protein LOC111484180 isoform X2 [Cucurbita maxima] >XP_022986462.1 uncharacterized protein LOC111484180 isoform X2 [Cucurbita maxima]) HSP 1 Score: 917.5 bits (2370), Expect = 4.9e-263 Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0
BLAST of CmaCh04G004110.1 vs. TAIR 10
Match: AT2G04305.1 (Magnesium transporter CorA-like family protein ) HSP 1 Score: 661.8 bits (1706), Expect = 4.5e-190 Identity = 329/407 (80.84%), Postives = 356/407 (87.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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