CmaCh02G006810.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G006810.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr02: 4174372 .. 4174887 (+)
Sequence length	306
RNA-Seq Expression	CmaCh02G006810.1
Synteny	CmaCh02G006810.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAACGTGGATGGGTTCATTGAAGAACGATGAACAACAACGTACTCTAAACGGCCTGAGCTGCCGATGCAATTAGTTGAACTCCTCAATTTATTGCATGAATTAAGAATCACCACCGTGGGTTTCCTCGTTTTCCCCCCACTGTTCTTCTAAAAGCGACACAAATCCTCTTTCTTTCGGTGAATCTCAGTGCTCTCACTTTTCTAATCCTTATTTTCTCTTTATTTTGCAAACCCATTTTGATTTTCTCTTTGCATTTGCAGTTCTATCGATTTCTTGCCCCTAATTTCGATTTGGGTCTTTTTCTTTCACTCTCTTTTCAGCTTTAAAGCTTCGTTTCTCAGATCCTTTCATTCCGCCGGGATGTGAAGCTTCGGCTCTGCTTTTTACTGTAAGTGCTCTCCGGCGGCCATGGCGAACTTCTCTTAAGCTTCTTTGTACCTCTTTTTACCTGTGGCTGGTTATTCCGGTGACGGCGTTGGAGGGTTCTTGGGTGTCGCTTTCTTCATTTTGA

mRNA sequence

ATGAGAACGTGGATGGGTTCATTGAAGAACGATGAACAACAACAATCACCACCGTGGGTTTCCTCGTTTTCCCCCCACTGTTCTTCTAAAAGCGACACAAATCCTCTTTCTTTCGCTTTAAAGCTTCGTTTCTCAGATCCTTTCATTCCGCCGGGATGTGAAGCTTCGGCTCTGCTTTTTACTGTAAGTGCTCTCCGGCGGCCATGGCGAACTTCTCTTAAGCTTCTTTGTACCTCTTTTTACCTGTGGCTGGTTATTCCGGTGACGGCGTTGGAGGGTTCTTGGGTGTCGCTTTCTTCATTTTGA

Coding sequence (CDS)

ATGAGAACGTGGATGGGTTCATTGAAGAACGATGAACAACAACAATCACCACCGTGGGTTTCCTCGTTTTCCCCCCACTGTTCTTCTAAAAGCGACACAAATCCTCTTTCTTTCGCTTTAAAGCTTCGTTTCTCAGATCCTTTCATTCCGCCGGGATGTGAAGCTTCGGCTCTGCTTTTTACTGTAAGTGCTCTCCGGCGGCCATGGCGAACTTCTCTTAAGCTTCTTTGTACCTCTTTTTACCTGTGGCTGGTTATTCCGGTGACGGCGTTGGAGGGTTCTTGGGTGTCGCTTTCTTCATTTTGA

Protein sequence

MRTWMGSLKNDEQQQSPPWVSSFSPHCSSKSDTNPLSFALKLRFSDPFIPPGCEASALLFTVSALRRPWRTSLKLLCTSFYLWLVIPVTALEGSWVSLSSF

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh02G006810.1 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh02G006810.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh02G006810	CmaCh02G006810	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G006810.1:exon:1312	CmaCh02G006810.1:exon:1312	exon
CmaCh02G006810.1:exon:1313	CmaCh02G006810.1:exon:1313	exon
CmaCh02G006810.1:exon:1314	CmaCh02G006810.1:exon:1314	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh02G006810.1:cds	CmaCh02G006810.1:cds	CDS
CmaCh02G006810.1:cds	CmaCh02G006810.1:cds_2	CDS
CmaCh02G006810.1:cds	CmaCh02G006810.1:cds_3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh02G006810.1	CmaCh02G006810.1-protein	polypeptide