CmaCh00G003080.1 (mRNA) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGTTAATTGAATACCCCGCTCCTAGTATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGATGCAATGATTCCTATCGATCGTGGTCAGCAAGAATTAATTATTGGGGACAGGCAGACCCGTAAAACTGCAGTAGCCACGGATATGATTCTGAATCAGCAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTAAGTAG ATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGACTTATTGCTATTGATGCAATGATTCCTATCGATCGTGGTCAGCAAGAATTAATTATTGGGGACAGGCAGACCCGTAAAACTGCAGTAGCCACGGATATGATTCTGAATCAGCAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTAAGTAG ATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGACTTATTGCTATTGATGCAATGATTCCTATCGATCGTGGTCAGCAAGAATTAATTATTGGGGACAGGCAGACCCGTAAAACTGCAGTAGCCACGGATATGATTCTGAATCAGCAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTAAGTAG MAEVKFQLLTLGLIAIDAMIPIDRGQQELIIGDRQTRKTAVATDMILNQQGQNVICVYVAIGQKASSVAK Homology
BLAST of CmaCh00G003080.1 vs. ExPASy Swiss-Prot
Match: P06450 (ATP synthase subunit alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=atpA PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 5.4e-22 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy Swiss-Prot
Match: A4QJI4 (ATP synthase subunit alpha, chloroplastic OS=Aethionema grandiflorum OX=72657 GN=atpA PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 9.3e-22 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy Swiss-Prot
Match: A4QK03 (ATP synthase subunit alpha, chloroplastic OS=Arabis hirsuta OX=78191 GN=atpA PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 9.3e-22 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy Swiss-Prot
Match: P56757 (ATP synthase subunit alpha, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=atpA PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 9.3e-22 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy Swiss-Prot
Match: Q8S8Y3 (ATP synthase subunit alpha, chloroplastic OS=Atropa belladonna OX=33113 GN=atpA PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 9.3e-22 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy TrEMBL
Match: A0A0G3F3C2 (ATP synthase subunit alpha OS=Rosmarinus officinalis OX=39367 GN=atpA PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy TrEMBL
Match: A0A7H0R1C6 (ATP synthase subunit alpha, chloroplastic OS=Viola philippica OX=316493 GN=atpA PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy TrEMBL
Match: A0A7L9D964 (ATP synthase subunit alpha OS=Primula prenantha subsp. morsheadiana OX=2763001 GN=atpA PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy TrEMBL
Match: A0A6G7GE45 (ATP synthase subunit alpha, chloroplastic OS=Primula filchnerae OX=170921 GN=atpA PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. ExPASy TrEMBL
Match: A0A6M3WBF0 (ATP synthase subunit alpha, chloroplastic OS=Salvia yunnanensis OX=342062 GN=atpA PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. NCBI nr
Match: KAG8391629.1 (hypothetical protein BUALT_Bualt01G0207200 [Buddleja alternifolia]) HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. NCBI nr
Match: QOJ51104.1 (ATP synthase CF1 alpha subunit [Primula sp. XJW-2020]) HSP 1 Score: 104.8 bits (260), Expect = 3.2e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. NCBI nr
Match: YP_009916553.1 (ATP synthase CF1 alpha subunit [Primula moupinensis] >ASM91684.1 ATP synthase CF1 alpha subunit [Primula moupinensis]) HSP 1 Score: 104.8 bits (260), Expect = 3.2e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. NCBI nr
Match: YP_009259772.1 (ATP synthase CF1 alpha subunit [Leitneria floridana] >ANC29174.1 ATP synthase CF1 alpha subunit [Leitneria floridana]) HSP 1 Score: 104.8 bits (260), Expect = 3.2e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. NCBI nr
Match: YP_010130274.1 (ATP synthase CF1 alpha subunit [Dodartia orientalis] >QPZ51192.1 ATP synthase CF1 alpha subunit [Dodartia orientalis]) HSP 1 Score: 104.8 bits (260), Expect = 3.2e-19 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha ) HSP 1 Score: 103.6 bits (257), Expect = 6.6e-23 Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein ) HSP 1 Score: 70.5 bits (171), Expect = 6.2e-13 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of CmaCh00G003080.1 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 ) HSP 1 Score: 67.8 bits (164), Expect = 4.0e-12 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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