CmaCh00G002990.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G002990.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH13-like
Location	Cma_Chr00: 22651823 .. 22654246 (-)
Sequence length	1800
RNA-Seq Expression	CmaCh00G002990.1
Synteny	CmaCh00G002990.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAAGGGGATTTCTCGTGTAGAATAAGAGTATTTGAGTCCTCGTATTTTGATTTTACTTAACCATGGTTAAGGGGATTTCTCGTGTAGAATAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCGGCAGAGCCAAGAGCAGAGGGGATAAAACAGAAACCCATTTTCCAAAATTTTCCATTTCCATTTTCGATTCTTCATCGTTCTGGAAAACAGAGAAAGAAGAGTTAAAGAGGGTATTGCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTGTTTCGTTTAGTTTGTCGCGTGAAATAACTGCTTTCTTTGTTTTCCAATGAGAAACTAAATTAAATCTTTCTCCTCGATTCAGGCTGTCGCTTTCCTGGGAATGTTTATAGCCTTCCAACTTTCTTTCAAACCCTTCCCTCATCGCATCGTTTTCTTTTCAGCGCATTTCGCTTGCCCTGTACCGGTTGATTCTTCGCTATTTCTGTCTCTTTTGATTCCTGGGTTGTTGGGTGATTCATTTTTTGTGTTGGGTTGATCTGGGGTTTTCTTAATTTTTCCTAATTTCCGAGATCTAGACAATGTTTTAGCGATGGTGTTCTTGGTAGAGGGTTTAGGTTTTTGGACAGAGATTTGATCTGGGGTTTTCTAATTTTGAAGCGTGTGTGTGATTATTGTTATCATTGGGTTTTAAAGATGAAGATTGAAGATGGGTTGCGGGGTGTGGGTGGGAAGGATGAGGATAAGACTGTGGTTGCTGCTGTTTTGGGTACTCGTGCTTTTAATTACATGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCTGTGAGGAATGATGATAATTTGCAGAACAAGCTTGCGGATCTGGTAGAGACACCCAACGCTTCTAATTTTTGTTGGAATTATGCAATTTTCTGGCAACTTTCCCATTCAAAATCTGGTCAATGGGTTTTGGGATGGGGAGATGGATCGTTTAGGGATCCTAGGGACGGTGAGGGAACAGAAGCTACGCAGATTCTTAGCCTTGAGCTTGAAGATGAGAGCCAACAAAGGATGAAGAAAAGGGCATTGCAGAAGCTTCATACACTGTTTGGTGGGTCTGATGAGGATAATTATGCTCTTGGATTGGATAGAGTTACTGATACTGAGATGTTTTTTCTTGCTTCCATGTATTTCTCCTTTCCTGGTGGAGAGGGGGGTCCTGGGAAGTGTTTCGCTTCTGGGAAACATGTCTGGCACTTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGGTCCTATCTGGCTAAGTCTGCTGGTATTCGTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGGTCCTATCTGGCTAAGTCTGCTGGTATTCGGACCATCGTCTTGGTGCCAACTGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCTGTGAGTGAGAGCTTAGAGTTGGTTCATTTGATTCGATCGTTGTTTTCATCTCAACGTTCGCTTGATGGAGAGTGAGAGCTTAGAGTTGGTTCATTTGATTCGATCGTTGTTTTCATCTCAACGTTCGCTTGATGGAGTGAGGACATTGGCTGTGATGTCGAGGATGGCTGAAAGGAAGGATGAAAACGCCCTGTTTCCAAGTTTGGGGATTGCAGAAAGAGGAGGAGGGGTTCCTAAGGTTTTTGGGCAGAGTTTGAACTCGGGGAACGTGGGTCGATCTCATTTCAGAGAGAAACTGGCGGTTAGGAAGATGGACGAAAGGGCATGGGAAGTATGTCCCAATGGAGGTAGAATTCAGTTTCAAAGCCCTCGAAAGGGCGTTCGAAGTCCGAGTTTGGGGCATGTTCATCTTCTCAAACAGGGGAATCCTACCGAAACTTTAGGCTCTCCAACTCCACCGGTAAATAATAATCACGAGCAGCTTGTCAATGGAGTTAGAGATGAATTTTGTCTCAATCCCTATCAATCACAGAAGATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACATCAAGGCCGACTCCTGTGATGAACCGTGTAGATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACATCAAGGCCGACTCCTGTGATGAACCGTGTAGTTGCAGATTCGGAACAATTAGATGTAGAGCCTCAATGCAAAGAAGAGGGACCTGGCACTGACGAAAGACGACCACGCAAACGAGGCAGAAAACCTGCAAATGGCAGGGAGGAACCACTAAATCACGTGGAGGCGGAGAGGCAACGTCGTGAAAAGTTGAACCAGCGGTTCTATGCTTTACGAGCTGTTGTACCCAATATCTCGAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTATACGAGCTGTTGTACCCAATATCTCGAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTACATTAA

mRNA sequence

ATGGTTAAGGGGATTTCTCGTGCTGTCGCTTTCCTGGGAATGTTTATAGCCTTCCAACTTTCTTTCAAACCCTTCCCTCATCGCATCGTTTTCTTTTCAGCGCATTTCGCTTGCCCTGTACCGATGAAGATTGAAGATGGGTTGCGGGGTGTGGGTGGGAAGGATGAGGATAAGACTGTGGTTGCTGCTGTTTTGGGTACTCGTGCTTTTAATTACATGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCTGTGAGGAATGATGATAATTTGCAGAACAAGCTTGCGGATCTGGTAGAGACACCCAACGCTTCTAATTTTTGTTGGAATTATGCAATTTTCTGGCAACTTTCCCATTCAAAATCTGGTCAATGGGTTTTGGGATGGGGAGATGGATCGTTTAGGGATCCTAGGGACGGTGAGGGAACAGAAGCTACGCAGATTCTTAGCCTTGAGCTTGAAGATGAGAGCCAACAAAGGATGAAGAAAAGGGCATTGCAGAAGCTTCATACACTGTTTGGTGGGTCTGATGAGGATAATTATGCTCTTGGATTGGATAGAGTTACTGATACTGAGATGTTTTTTCTTGCTTCCATGTATTTCTCCTTTCCTGGTGGAGAGGGGGGTCCTGGGAAGTGTTTCGCTTCTGGGAAACATGTCTGGCACTTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGTCTGCTGGTATTCGTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGGTCCTATCTGGCTAAGTCTGCTGGTATTCGGACCATCGTCTTGGTGCCAACTGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCTGTGAGTGAGAGCTTAGAGTTGGTTCATTTGATTCGATCGTTTGAGAGCTTAGAGTTGGTTCATTTGATTCGATCGTTGTTTTCATCTCAACGTTCGCTTGATGGAGTGAGGACATTGGCTGTGATGTCGAGGATGGCTGAAAGGAAGGATGAAAACGCCCTGTTTCCAAGTTTGGGGATTGCAGAAAGAGGAGGAGGGGTTCCTAAGGTTTTTGGGCAGAGTTTGAACTCGGGGAACGTGGGTCGATCTCATTTCAGAGAGAAACTGGCGGTTAGGAAGATGGACGAAAGGGCATGGGAAGTATGTCCCAATGGAGGTAGAATTCAGTTTCAAAGCCCTCGAAAGGGCGTTCGAAGTCCGAGTTTGGGGCATGTTCATCTTCTCAAACAGGGGAATCCTACCGAAACTTTAGGCTCTCCAACTCCACCGGTAAATAATAATCACGAGCAGCTTGTCAATGGAGTTAGAGATGAATTTTGTCTCAATCCCTATCAATCACAGAAGATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACATCAAGGCCGACTCCTGTGATGAACCGTATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACATCAAGGCCGACTCCTGTGATGAACCGTGTAGTTGCAGATTCGGAACAATTAGATGTAGAGCCTCAATGCAAAGAAGAGGGACCTGGCACTGACGAAAGACGACCACGCAAACGAGGCAGAAAACCTGCAAATGGCAGGGAGGAACCACTAAATCACGTGGAGGCGGAGAGGCAACGTCGTGAAAAGTTGAACCAGCGGTTCTATGCTTTACGAGCTGTTGTACCCAATATCTCGAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTATACGAGCTGTTGTACCCAATATCTCGAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTACATTAA

Coding sequence (CDS)

ATGGTTAAGGGGATTTCTCGTGCTGTCGCTTTCCTGGGAATGTTTATAGCCTTCCAACTTTCTTTCAAACCCTTCCCTCATCGCATCGTTTTCTTTTCAGCGCATTTCGCTTGCCCTGTACCGATGAAGATTGAAGATGGGTTGCGGGGTGTGGGTGGGAAGGATGAGGATAAGACTGTGGTTGCTGCTGTTTTGGGTACTCGTGCTTTTAATTACATGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCTGTGAGGAATGATGATAATTTGCAGAACAAGCTTGCGGATCTGGTAGAGACACCCAACGCTTCTAATTTTTGTTGGAATTATGCAATTTTCTGGCAACTTTCCCATTCAAAATCTGGTCAATGGGTTTTGGGATGGGGAGATGGATCGTTTAGGGATCCTAGGGACGGTGAGGGAACAGAAGCTACGCAGATTCTTAGCCTTGAGCTTGAAGATGAGAGCCAACAAAGGATGAAGAAAAGGGCATTGCAGAAGCTTCATACACTGTTTGGTGGGTCTGATGAGGATAATTATGCTCTTGGATTGGATAGAGTTACTGATACTGAGATGTTTTTTCTTGCTTCCATGTATTTCTCCTTTCCTGGTGGAGAGGGGGGTCCTGGGAAGTGTTTCGCTTCTGGGAAACATGTCTGGCACTTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGTCTGCTGGTATTCGTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGGTCCTATCTGGCTAAGTCTGCTGGTATTCGGACCATCGTCTTGGTGCCAACTGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCTGTGAGTGAGAGCTTAGAGTTGGTTCATTTGATTCGATCGTTTGAGAGCTTAGAGTTGGTTCATTTGATTCGATCGTTGTTTTCATCTCAACGTTCGCTTGATGGAGTGAGGACATTGGCTGTGATGTCGAGGATGGCTGAAAGGAAGGATGAAAACGCCCTGTTTCCAAGTTTGGGGATTGCAGAAAGAGGAGGAGGGGTTCCTAAGGTTTTTGGGCAGAGTTTGAACTCGGGGAACGTGGGTCGATCTCATTTCAGAGAGAAACTGGCGGTTAGGAAGATGGACGAAAGGGCATGGGAAGTATGTCCCAATGGAGGTAGAATTCAGTTTCAAAGCCCTCGAAAGGGCGTTCGAAGTCCGAGTTTGGGGCATGTTCATCTTCTCAAACAGGGGAATCCTACCGAAACTTTAGGCTCTCCAACTCCACCGGTAAATAATAATCACGAGCAGCTTGTCAATGGAGTTAGAGATGAATTTTGTCTCAATCCCTATCAATCACAGAAGATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACATCAAGGCCGACTCCTGTGATGAACCGTATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACATCAAGGCCGACTCCTGTGATGAACCGTGTAGTTGCAGATTCGGAACAATTAGATGTAGAGCCTCAATGCAAAGAAGAGGGACCTGGCACTGACGAAAGACGACCACGCAAACGAGGCAGAAAACCTGCAAATGGCAGGGAGGAACCACTAAATCACGTGGAGGCGGAGAGGCAACGTCGTGAAAAGTTGAACCAGCGGTTCTATGCTTTACGAGCTGTTGTACCCAATATCTCGAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTATACGAGCTGTTGTACCCAATATCTCGAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTACATTAA

Protein sequence

MVKGISRAVAFLGMFIAFQLSFKPFPHRIVFFSAHFACPVPMKIEDGLRGVGGKDEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYAIFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEYCVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLELVHLIRSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERGGGVPKVFGQSLNSGNVGRSHFREKLAVRKMDERAWEVCPNGGRIQFQSPRKGVRSPSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVATSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCKEEGPGTDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYTSCCTQYLEDGQSFTARRCHCLH

Homology

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BLAST of CmaCh00G002990.1 vs. ExPASy Swiss-Prot
Match: A0A3Q7ELQ2 (Transcription factor MTB1 OS=Solanum lycopersicum OX=4081 GN=MTB1 PE=1 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.1e-147
Identity = 304/537 (56.61%), Postives = 357/537 (66.48%), Query Frame = 0


Query: 56  EDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYAI 115
           EDK +VA+VLG  AF Y+MS SVS E   MA+ ND NLQNKL+DLVE PNA+NF WNYAI
Sbjct: 11  EDKAMVASVLGKEAFEYLMSGSVSAECSLMAIGNDQNLQNKLSDLVERPNAANFSWNYAI 70

Query: 116 FWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTLF 175
           FWQ+S SKSG+ VLGWGDG  R+P++ E  E  +IL+L L+DE QQRM+KR LQKLH LF
Sbjct: 71  FWQISRSKSGELVLGWGDGCCREPKEAEEREVKKILNLRLDDEGQQRMRKRVLQKLHMLF 130

Query: 176 GGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEYC 235
           GG+DEDNYA GLDRVTDTEMFFLASMYFSFP GEGGPGKCF SGK++W            
Sbjct: 131 GGTDEDNYAFGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFGSGKYLW------------ 190

Query: 236 VSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLELVHLIR 295
                  D L S  +YC RS+LAKSAG++TI L+PTDVGVVELGSVRS+           
Sbjct: 191 -----LSDALTSNLDYCARSFLAKSAGMQTIALIPTDVGVVELGSVRSIP---------- 250

Query: 296 SFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDEN--ALFPSLGIAERGGGVPKV 355
             ESLEL+  I+S FSS  SL   +  A ++ + E+ + N   L  S  + ER  G PK+
Sbjct: 251 --ESLELLQNIKSCFSSFLSLVRDKQAAGIAAVPEKNEGNNPRLSNSGAVTERTDGNPKI 310

Query: 356 FGQSLNSGNVGRSHFREKLAVRKMDERAWEVCPNGGRIQFQSPRKGVRSPSLGHVHLLKQ 415
           FG  LNSG    +HFREKLAVRK +ER W++  NG R+ F + R G+   S      +K 
Sbjct: 311 FGHDLNSG----THFREKLAVRKAEERPWDMYQNGNRMPFVNARNGLNPASWAQFSNVKL 370

Query: 416 GNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVATSRPTPVMNRI 475
           G P E    PTP  N     L+NG R+EF LN +Q QK A                    
Sbjct: 371 GKPVELYAPPTPGHN-----LMNGGREEFRLNNFQHQKPA-------------------- 430

Query: 476 AQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCKEEGPG-TDERRPRKRGRKPANGREE 535
           A+MQIDF+ ATSR T V      +SE  DVE  CKE+  G  DE+RPRKRGRKPANGREE
Sbjct: 431 ARMQIDFTGATSR-TIVSPAHNVESEHSDVEASCKEDRAGPVDEKRPRKRGRKPANGREE 488

Query: 536 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYTSCCTQYLEDGQS 590
           PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAY +   + L D +S
Sbjct: 491 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYITELQKKLRDMES 488

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BLAST of CmaCh00G002990.1 vs. ExPASy Swiss-Prot
Match: A0A3Q7HES4 (Transcription factor MTB2 OS=Solanum lycopersicum OX=4081 GN=MTB2 PE=2 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 6.5e-140
Identity = 290/536 (54.10%), Postives = 355/536 (66.23%), Query Frame = 0


Query: 55  DEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYA 114
           DEDKT+VAAVLGT+AF+Y+MS  VS E   MA+ +D+NLQN L+DLVE PNASNF WNYA
Sbjct: 7   DEDKTMVAAVLGTKAFDYLMSSLVSAECSLMAMGSDENLQNMLSDLVERPNASNFSWNYA 66

Query: 115 IFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTL 174
           IFWQ+S SK G+ VLGWGDG  R+ R+GE +E T+IL++ L DE+QQRM+KR LQKLH  
Sbjct: 67  IFWQISRSKLGELVLGWGDGCCREAREGEESELTRILNIRLADEAQQRMRKRVLQKLHMF 126

Query: 175 FGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEY 234
           FGG+DEDNY  GLD+VTDTEMFFLASMYFSFP G+GGPGKCF +GKHVW           
Sbjct: 127 FGGTDEDNYVSGLDKVTDTEMFFLASMYFSFPRGQGGPGKCFTAGKHVW----------- 186

Query: 235 CVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLELVHLI 294
                   DV+ S  +YC RS+L KSAG++T+VL+PTD+GV+ELGSVR++ ESLELVH I
Sbjct: 187 ------LSDVMRSSVDYCSRSFLMKSAGMQTVVLIPTDIGVMELGSVRTIPESLELVHSI 246

Query: 295 RSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKD-ENALFPSLGIAERGGGVPKV 354
           +S  S        S  +  R+       AV   +AE+K+  N++FPS    ++    PK+
Sbjct: 247 KSCFS--------SFLAQVRAKQAAPLAAV---VAEKKNGNNSVFPSSFPFDQSKENPKI 306

Query: 355 FGQSLNSGNVGRSHFREKLAVRKMDERAWEVCPNGGRIQFQSPRKGVRSPSLGHVHLLKQ 414
           FGQ+L SG+   + FREKLA+RK  +   E+  NG R    + + GVR  S      +K 
Sbjct: 307 FGQNLESGS---TEFREKLALRKPVDGPLEMYRNGNRAPIINTQNGVRPVSWASFGNVKP 366

Query: 415 GNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVATSRPTPVMNRI 474
           GN  +      PP  NN  + VNG R+E  LN  Q QK   MQIDF+   SRP       
Sbjct: 367 GNSVDLYSPQAPP--NNLREFVNGGREELRLNSLQHQKPGGMQIDFT--NSRP------- 426

Query: 475 AQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCKEEGPG-TDERRPRKRGRKPANGREE 534
                   V +  PT        +SE  DVE  CKE+  G  DERRPRKRGRKPANGREE
Sbjct: 427 --------VVSPVPT-------VESEHSDVEVSCKEKHAGPADERRPRKRGRKPANGREE 485

Query: 535 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYTSCCTQYLEDGQ 589
           PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIA+ +   + + D +
Sbjct: 487 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAHITDMQKRIRDAE 485

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BLAST of CmaCh00G002990.1 vs. ExPASy Swiss-Prot
Match: Q9LNJ5 (Transcription factor bHLH13 OS=Arabidopsis thaliana OX=3702 GN=BHLH13 PE=1 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.9e-115
Identity = 267/551 (48.46%), Postives = 329/551 (59.71%), Query Frame = 0


Query: 55  DEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYA 114
           ++DK +VA++LG RA +Y++S SVSN NL M + +D+NLQNKL+DLVE PNASNF WNYA
Sbjct: 10  EDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPNASNFSWNYA 69

Query: 115 IFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTL 174
           IFWQ+S SK+G  VL WGDG  R+P++GE +E  +ILS+  E+E+ Q M+KR LQKLH L
Sbjct: 70  IFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKRVLQKLHDL 129

Query: 175 FGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEY 234
           FGGS+E+N ALGLDRVTDTEMF L+SMYFSFP GEGGPGKCFAS K VW           
Sbjct: 130 FGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVW----------- 189

Query: 235 CVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLELVHLI 294
                   DV+NS ++YCVRS+LAKSAGI+T+VLVPTD+GVVELGS   +          
Sbjct: 190 ------LSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLP--------- 249

Query: 295 RSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERGGGVPKVF 354
              ES + +  IRSLF+S  SL  VR +A+   +AE+ D+N                K+F
Sbjct: 250 ---ESEDSILSIRSLFTS--SLPPVRAVALPVTVAEKIDDNR--------------TKIF 309

Query: 355 GQSLNSGNVGRSH------------------FREKLAVRKMDERA---WEVCP-NGGRIQ 414
           G+ L++    + H                  FREKL VRKMD+RA    +  P NG R  
Sbjct: 310 GKDLHNSGFLQHHQHHQQQQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDAYPNNGNRFM 369

Query: 415 FQSPRKGVRSPSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVN----GVRDEFCLNPYQ 474
           F +P                 G    TL SPT     N+ + +N       DEF   P Q
Sbjct: 370 FSNP-----------------GTNNNTLLSPTWVQPENYTRPINVKEVPSTDEFKFLPLQ 429

Query: 475 SQKIAQMQIDFSVATSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCK 534
                        ++ R  P     AQMQIDFS A+SR +   +      E  D      
Sbjct: 430 Q------------SSQRLLPP----AQMQIDFSAASSRASENNSDGEGGGEWAD------ 474

Query: 535 EEGPGTDE---RRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMD 577
               G DE    RPRKRGR+PANGR E LNHVEAERQRREKLNQRFYALR+VVPNISKMD
Sbjct: 490 --AVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMD 474

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BLAST of CmaCh00G002990.1 vs. ExPASy Swiss-Prot
Match: Q9ZPY8 (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=AIB PE=2 SV=2)

HSP 1 Score: 355.9 bits (912), Expect = 8.9e-97
Identity = 227/534 (42.51%), Postives = 309/534 (57.87%), Query Frame = 0


Query: 51  VGGKDEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFC 110
           +G  DEDK+VV+AVLG  A +++ + S SN+NLF+ +  DD L  KL+ LV+ PN+ NF 
Sbjct: 6   LGWDDEDKSVVSAVLGHLASDFLRANSNSNQNLFLVMGTDDTLNKKLSSLVDWPNSENFS 65

Query: 111 WNYAIFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQ---ILSLELEDESQQRMKKRA 170
           WNYAIFWQ + S+SGQ VLGWGDG  R+P + E ++  +     ++  E+E+ Q M+KR 
Sbjct: 66  WNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDMRKRV 125

Query: 171 LQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDV 230
           LQKLH LFGGSDEDNYAL L++VT TE+FFLASMYF F  GEGGPG+C++SGKHVW    
Sbjct: 126 LQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEGGPGRCYSSGKHVW---- 185

Query: 231 LNSPAEYCVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSES 290
                          D +NS ++YC RS++AKSAGIRTIV+VPTD GV+ELGSV S+ E+
Sbjct: 186 -------------LSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPEN 245

Query: 291 LELVHLIRSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERG 350
              + L++S ++L +  + + +  +  +                                
Sbjct: 246 ---IGLVKSVQALFMRRVTQPVMVTSNT-----------------------------NMT 305

Query: 351 GGVPKVFGQSLNSGNVGRSHFREKLAVRK-MDER----AWEVCPNGGRIQFQSPRKGVRS 410
           GG+ K+FGQ L+    G   + +KL VR+ +DER    +WE   N             + 
Sbjct: 306 GGIHKLFGQDLS----GAHAYPKKLEVRRNLDERFTPQSWEGYNNN------------KG 365

Query: 411 PSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVA 470
           P+ G+     Q +  + L +    V+NN+                      + QI+F+ +
Sbjct: 366 PTFGYT---PQRDDVKVLENVNMVVDNNN---------------------YKTQIEFAGS 425

Query: 471 TSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCKEEGPGTDERRPRKR 530
           +   +   +   Q +   S    RP  ++    A +  + V           DE+RPRKR
Sbjct: 426 SVAASSNPSTNTQQEKSESCTEKRPVSLL----AGAGIVSV----------VDEKRPRKR 436

Query: 531 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAY 577
           GRKPANGREEPLNHVEAERQRREKLNQRFYALR+VVPNISKMDKASLLGDAI+Y
Sbjct: 486 GRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISY 436

[Close]

BLAST of CmaCh00G002990.1 vs. ExPASy Swiss-Prot
Match: A0A3Q7H216 (Transcription factor MTB3 OS=Solanum lycopersicum OX=4081 GN=MTB3 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.0e-52
Identity = 176/526 (33.46%), Postives = 232/526 (44.11%), Query Frame = 0


Query: 54  KDEDKTVVAAVLGTRAFNYMMSCSVSNENL--FMAVRNDDNLQNKLADLVETPNASNFCW 113
           K EDK  +  VLG+ A  +  S S SN  L  F + R D  +Q  L  +VE  +     W
Sbjct: 8   KGEDKVNMEGVLGSEAVEF-FSWSASNHMLTEFTSSRGDLGVQQALCKIVEGSD-----W 67

Query: 114 NYAIFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKL 173
            YAI+WQ++ SKSG+  L WGDG  R+ + G+G  A      ++ D ++   KK  LQK+
Sbjct: 68  TYAIYWQVAKSKSGKSALIWGDGHCRETKIGQGEGANDSAHQKMMDGNK---KKMVLQKI 127

Query: 174 HTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGE-GGPGKCFASGKHVWHLDVLNS 233
           HT FGGS++DN A  L+ V+D E+F+L SMY+ FP  +   P + F S + +W  D+   
Sbjct: 128 HTCFGGSEDDNIAAKLESVSDVEVFYLTSMYYIFPFDKPSSPSQSFNSARSIWGSDL--- 187

Query: 234 PAEYCVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLEL 293
             + C+              +  RSYLAK A   T+V VP   GVVELGSV+S+ E   L
Sbjct: 188 --KGCLE------------HFQSRSYLAKLARFETLVFVPLKSGVVELGSVKSIPEDQNL 247

Query: 294 VHLIRSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERGGGV 353
           + +                         V+T  V+S   + K                  
Sbjct: 248 IQM-------------------------VKTSVVVSNPPQPKANT--------------- 307

Query: 354 PKVFGQSLNSGNVGRSHFREKLAVRKMDERAWEVCPNGGRIQFQSPRKGVRSPSLGHVHL 413
            K+FG+ L+ G           + +  +E           + F S    V++        
Sbjct: 308 -KIFGRELSLGGAKSGPISINFSPKVEEE-----------LSFASDSYEVQA-------- 367

Query: 414 LKQGNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVATSRPTPVM 473
                    LGS     N++     NG R +                             
Sbjct: 368 --------ALGSSQVYGNSS-----NGYRSD----------------------------- 372

Query: 474 NRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCKEEGPGTDERRPRKRGRKPANGR 533
                                            E + K      DER+PRKRGRKPANGR
Sbjct: 428 ---------------------------------EGEGKLYKEELDERKPRKRGRKPANGR 372

Query: 534 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAY 577
           EE LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAY
Sbjct: 488 EEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAY 372

[Close]

BLAST of CmaCh00G002990.1 vs. TAIR 10
Match: AT1G01260.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-116
Identity = 267/551 (48.46%), Postives = 329/551 (59.71%), Query Frame = 0


Query: 55  DEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYA 114
           ++DK +VA++LG RA +Y++S SVSN NL M + +D+NLQNKL+DLVE PNASNF WNYA
Sbjct: 10  EDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPNASNFSWNYA 69

Query: 115 IFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTL 174
           IFWQ+S SK+G  VL WGDG  R+P++GE +E  +ILS+  E+E+ Q M+KR LQKLH L
Sbjct: 70  IFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKRVLQKLHDL 129

Query: 175 FGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEY 234
           FGGS+E+N ALGLDRVTDTEMF L+SMYFSFP GEGGPGKCFAS K VW           
Sbjct: 130 FGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVW----------- 189

Query: 235 CVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLELVHLI 294
                   DV+NS ++YCVRS+LAKSAGI+T+VLVPTD+GVVELGS   +          
Sbjct: 190 ------LSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLP--------- 249

Query: 295 RSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERGGGVPKVF 354
              ES + +  IRSLF+S  SL  VR +A+   +AE+ D+N                K+F
Sbjct: 250 ---ESEDSILSIRSLFTS--SLPPVRAVALPVTVAEKIDDNR--------------TKIF 309

Query: 355 GQSLNSGNVGRSH------------------FREKLAVRKMDERA---WEVCP-NGGRIQ 414
           G+ L++    + H                  FREKL VRKMD+RA    +  P NG R  
Sbjct: 310 GKDLHNSGFLQHHQHHQQQQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDAYPNNGNRFM 369

Query: 415 FQSPRKGVRSPSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVN----GVRDEFCLNPYQ 474
           F +P                 G    TL SPT     N+ + +N       DEF   P Q
Sbjct: 370 FSNP-----------------GTNNNTLLSPTWVQPENYTRPINVKEVPSTDEFKFLPLQ 429

Query: 475 SQKIAQMQIDFSVATSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCK 534
                        ++ R  P     AQMQIDFS A+SR +   +      E  D      
Sbjct: 430 Q------------SSQRLLPP----AQMQIDFSAASSRASENNSDGEGGGEWAD------ 474

Query: 535 EEGPGTDE---RRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMD 577
               G DE    RPRKRGR+PANGR E LNHVEAERQRREKLNQRFYALR+VVPNISKMD
Sbjct: 490 --AVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMD 474

[Close]

BLAST of CmaCh00G002990.1 vs. TAIR 10
Match: AT1G01260.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-116
Identity = 267/551 (48.46%), Postives = 329/551 (59.71%), Query Frame = 0


Query: 55  DEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYA 114
           ++DK +VA++LG RA +Y++S SVSN NL M + +D+NLQNKL+DLVE PNASNF WNYA
Sbjct: 10  EDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPNASNFSWNYA 69

Query: 115 IFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTL 174
           IFWQ+S SK+G  VL WGDG  R+P++GE +E  +ILS+  E+E+ Q M+KR LQKLH L
Sbjct: 70  IFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKRVLQKLHDL 129

Query: 175 FGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEY 234
           FGGS+E+N ALGLDRVTDTEMF L+SMYFSFP GEGGPGKCFAS K VW           
Sbjct: 130 FGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVW----------- 189

Query: 235 CVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLELVHLI 294
                   DV+NS ++YCVRS+LAKSAGI+T+VLVPTD+GVVELGS   +          
Sbjct: 190 ------LSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLP--------- 249

Query: 295 RSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERGGGVPKVF 354
              ES + +  IRSLF+S  SL  VR +A+   +AE+ D+N                K+F
Sbjct: 250 ---ESEDSILSIRSLFTS--SLPPVRAVALPVTVAEKIDDNR--------------TKIF 309

Query: 355 GQSLNSGNVGRSH------------------FREKLAVRKMDERA---WEVCP-NGGRIQ 414
           G+ L++    + H                  FREKL VRKMD+RA    +  P NG R  
Sbjct: 310 GKDLHNSGFLQHHQHHQQQQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDAYPNNGNRFM 369

Query: 415 FQSPRKGVRSPSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVN----GVRDEFCLNPYQ 474
           F +P                 G    TL SPT     N+ + +N       DEF   P Q
Sbjct: 370 FSNP-----------------GTNNNTLLSPTWVQPENYTRPINVKEVPSTDEFKFLPLQ 429

Query: 475 SQKIAQMQIDFSVATSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCK 534
                        ++ R  P     AQMQIDFS A+SR +   +      E  D      
Sbjct: 430 Q------------SSQRLLPP----AQMQIDFSAASSRASENNSDGEGGGEWAD------ 474

Query: 535 EEGPGTDE---RRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMD 577
               G DE    RPRKRGR+PANGR E LNHVEAERQRREKLNQRFYALR+VVPNISKMD
Sbjct: 490 --AVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMD 474

[Close]

BLAST of CmaCh00G002990.1 vs. TAIR 10
Match: AT1G01260.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 417.9 bits (1073), Expect = 1.3e-116
Identity = 267/551 (48.46%), Postives = 329/551 (59.71%), Query Frame = 0


Query: 55  DEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYA 114
           ++DK +VA++LG RA +Y++S SVSN NL M + +D+NLQNKL+DLVE PNASNF WNYA
Sbjct: 10  EDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPNASNFSWNYA 69

Query: 115 IFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTL 174
           IFWQ+S SK+G  VL WGDG  R+P++GE +E  +ILS+  E+E+ Q M+KR LQKLH L
Sbjct: 70  IFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKRVLQKLHDL 129

Query: 175 FGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEY 234
           FGGS+E+N ALGLDRVTDTEMF L+SMYFSFP GEGGPGKCFAS K VW           
Sbjct: 130 FGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVW----------- 189

Query: 235 CVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSESLELVHLI 294
                   DV+NS ++YCVRS+LAKSAGI+T+VLVPTD+GVVELGS   +          
Sbjct: 190 ------LSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLP--------- 249

Query: 295 RSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERGGGVPKVF 354
              ES + +  IRSLF+S  SL  VR +A+   +AE+ D+N                K+F
Sbjct: 250 ---ESEDSILSIRSLFTS--SLPPVRAVALPVTVAEKIDDNR--------------TKIF 309

Query: 355 GQSLNSGNVGRSH------------------FREKLAVRKMDERA---WEVCP-NGGRIQ 414
           G+ L++    + H                  FREKL VRKMD+RA    +  P NG R  
Sbjct: 310 GKDLHNSGFLQHHQHHQQQQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDAYPNNGNRFM 369

Query: 415 FQSPRKGVRSPSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVN----GVRDEFCLNPYQ 474
           F +P                 G    TL SPT     N+ + +N       DEF   P Q
Sbjct: 370 FSNP-----------------GTNNNTLLSPTWVQPENYTRPINVKEVPSTDEFKFLPLQ 429

Query: 475 SQKIAQMQIDFSVATSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCK 534
                        ++ R  P     AQMQIDFS A+SR +   +      E  D      
Sbjct: 430 Q------------SSQRLLPP----AQMQIDFSAASSRASENNSDGEGGGEWAD------ 474

Query: 535 EEGPGTDE---RRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMD 577
               G DE    RPRKRGR+PANGR E LNHVEAERQRREKLNQRFYALR+VVPNISKMD
Sbjct: 490 --AVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMD 474

[Close]

BLAST of CmaCh00G002990.1 vs. TAIR 10
Match: AT2G46510.1 (ABA-inducible BHLH-type transcription factor )

HSP 1 Score: 355.9 bits (912), Expect = 6.3e-98
Identity = 227/534 (42.51%), Postives = 309/534 (57.87%), Query Frame = 0


Query: 51  VGGKDEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFC 110
           +G  DEDK+VV+AVLG  A +++ + S SN+NLF+ +  DD L  KL+ LV+ PN+ NF 
Sbjct: 6   LGWDDEDKSVVSAVLGHLASDFLRANSNSNQNLFLVMGTDDTLNKKLSSLVDWPNSENFS 65

Query: 111 WNYAIFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQ---ILSLELEDESQQRMKKRA 170
           WNYAIFWQ + S+SGQ VLGWGDG  R+P + E ++  +     ++  E+E+ Q M+KR 
Sbjct: 66  WNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDMRKRV 125

Query: 171 LQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDV 230
           LQKLH LFGGSDEDNYAL L++VT TE+FFLASMYF F  GEGGPG+C++SGKHVW    
Sbjct: 126 LQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEGGPGRCYSSGKHVW---- 185

Query: 231 LNSPAEYCVSLLVFVDVLNSPAEYCVRSYLAKSAGIRTIVLVPTDVGVVELGSVRSVSES 290
                          D +NS ++YC RS++AKSAGIRTIV+VPTD GV+ELGSV S+ E+
Sbjct: 186 -------------LSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPEN 245

Query: 291 LELVHLIRSFESLELVHLIRSLFSSQRSLDGVRTLAVMSRMAERKDENALFPSLGIAERG 350
              + L++S ++L +  + + +  +  +                                
Sbjct: 246 ---IGLVKSVQALFMRRVTQPVMVTSNT-----------------------------NMT 305

Query: 351 GGVPKVFGQSLNSGNVGRSHFREKLAVRK-MDER----AWEVCPNGGRIQFQSPRKGVRS 410
           GG+ K+FGQ L+    G   + +KL VR+ +DER    +WE   N             + 
Sbjct: 306 GGIHKLFGQDLS----GAHAYPKKLEVRRNLDERFTPQSWEGYNNN------------KG 365

Query: 411 PSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVA 470
           P+ G+     Q +  + L +    V+NN+                      + QI+F+ +
Sbjct: 366 PTFGYT---PQRDDVKVLENVNMVVDNNN---------------------YKTQIEFAGS 425

Query: 471 TSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQLDVEPQCKEEGPGTDERRPRKR 530
           +   +   +   Q +   S    RP  ++    A +  + V           DE+RPRKR
Sbjct: 426 SVAASSNPSTNTQQEKSESCTEKRPVSLL----AGAGIVSV----------VDEKRPRKR 436

Query: 531 GRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAY 577
           GRKPANGREEPLNHVEAERQRREKLNQRFYALR+VVPNISKMDKASLLGDAI+Y
Sbjct: 486 GRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISY 436

[Close]

BLAST of CmaCh00G002990.1 vs. TAIR 10
Match: AT4G17880.1 (Basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 193.4 bits (490), Expect = 5.4e-49
Identity = 163/509 (32.02%), Postives = 238/509 (46.76%), Query Frame = 0


Query: 89  NDDNLQNKLADLVETPNASNFCWNYAIFWQLSHSKSGQ-------WVLGWGDGSFRDPRD 148
           N+DNLQ +L  L+E  N +   W YA+FWQ SH  +G+        +LGWGDG ++   +
Sbjct: 59  NEDNLQQRLQALIEGANEN---WTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEE 118

Query: 149 GEGTEATQILSLELEDESQQRMKKRALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASM 208
               + +   S      ++Q  +KR +++L++L  G        G + VTDTE FFL SM
Sbjct: 119 KSRKKKSNPAS-----AAEQEHRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWFFLVSM 178

Query: 209 YFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEYCVSLLVFVDVLNSPAEYCVRSYLAKSA 268
             SF  G G PG+ F++   +W L   N+ A                   C R+   +  
Sbjct: 179 TQSFVKGTGLPGQAFSNSDTIW-LSGSNALA----------------GSSCERARQGQIY 238

Query: 269 GIRTIVLVPTDVGVVELGSVRSVSESLELVHLIRSFESLELVHLIRSLFSSQRSLDGVRT 328
           G++T+V V T+ GVVELGS   + +S +LV  + +F +          F++     G   
Sbjct: 239 GLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFFN----------FNNGGGEFGSWA 298

Query: 329 LAVMSRMAERKDENALFPSLGIAERGG-GVPKVFGQSLNSGNVGRSHFREKLAVRKMDER 388
             +        D+    P L I+E  G     V    +N+G    +   +   + K+   
Sbjct: 299 FNL------NPDQGENDPGLWISEPNGVDSGLVAAPVMNNGGNDSTSNSDSQPISKL--- 358

Query: 389 AWEVCPNGGRIQFQSPRKGVRSPSLGHVHLLKQGNPTETLGSPTPPVNNNHEQLVNGVRD 448
               C NG  ++  +P+       +   + ++ G   ++      PV+NN E    G+  
Sbjct: 359 ----C-NGSSVENPNPKVLKSCEMVNFKNGIENGQEEDSSNKKRSPVSNNEE----GMLS 418

Query: 449 EFCLNPYQSQKIAQMQIDFSVATSRPTPVMNRIAQMQIDFSVATSRPTPVMNRVVADSEQ 508
              + P  S                            ++ SVA            A+S +
Sbjct: 419 FTSVLPCDSN------------------------HSDLEASVAKE----------AESNR 470

Query: 509 LDVEPQCKEEGPGTDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPN 568
           + VEP          E++PRKRGRKPANGREEPLNHVEAERQRREKLNQRFY+LRAVVPN
Sbjct: 479 VVVEP----------EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPN 470

Query: 569 ISKMDKASLLGDAIAYTSCCTQYLEDGQS 590
           +SKMDKASLLGDAI+Y S     L+  +S
Sbjct: 539 VSKMDKASLLGDAISYISELKSKLQKAES 470

The following BLAST results are available for this feature:

BLAST of CmaCh00G002990.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A3Q7ELQ2	1.1e-147	56.61	Transcription factor MTB1 OS=Solanum lycopersicum OX=4081 GN=MTB1 PE=1 SV=1	[more]
A0A3Q7HES4	6.5e-140	54.10	Transcription factor MTB2 OS=Solanum lycopersicum OX=4081 GN=MTB2 PE=2 SV=1	[more]
Q9LNJ5	1.9e-115	48.46	Transcription factor bHLH13 OS=Arabidopsis thaliana OX=3702 GN=BHLH13 PE=1 SV=1	[more]
Q9ZPY8	8.9e-97	42.51	Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana OX=3702 GN=...	[more]
A0A3Q7H216	3.0e-52	33.46	Transcription factor MTB3 OS=Solanum lycopersicum OX=4081 GN=MTB3 PE=2 SV=1	[more]

BLAST of CmaCh00G002990.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01260.1	1.3e-116	48.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G01260.2	1.3e-116	48.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G01260.3	1.3e-116	48.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46510.1	6.3e-98	42.51	ABA-inducible BHLH-type transcription factor	[more]
AT4G17880.1	5.4e-49	32.02	Basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 537..586 e-value: 1.4E-10 score: 51.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 535..576 e-value: 5.4E-8 score: 32.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 531..580 score: 14.963916
IPR025610	Transcription factor MYC/MYB N-terminal	PFAM	PF14215	bHLH-MYC_N	coord: 93..296 e-value: 5.1E-49 score: 166.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 516..579 e-value: 1.4E-12 score: 49.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 530..586
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..542
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 502..542
None	No IPR available	PANTHER	PTHR11514:SF107	TRANSCRIPTION FACTOR MTB1	coord: 239..296 coord: 298..466
None	No IPR available	PANTHER	PTHR11514:SF107	TRANSCRIPTION FACTOR MTB1	coord: 473..589 coord: 54..236
IPR045084	Transcription factor AIB/MYC-like	PANTHER	PTHR11514	MYC	coord: 473..589 coord: 54..236
IPR045084	Transcription factor AIB/MYC-like	PANTHER	PTHR11514	MYC	coord: 298..466
IPR045084	Transcription factor AIB/MYC-like	PANTHER	PTHR11514	MYC	coord: 239..296

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh00G002990	CmaCh00G002990	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh00G002990.1:exon:1602	CmaCh00G002990.1:exon:1602	exon
CmaCh00G002990.1:exon:1603	CmaCh00G002990.1:exon:1603	exon
CmaCh00G002990.1:exon:1604	CmaCh00G002990.1:exon:1604	exon
CmaCh00G002990.1:exon:1605	CmaCh00G002990.1:exon:1605	exon
CmaCh00G002990.1:exon:1606	CmaCh00G002990.1:exon:1606	exon
CmaCh00G002990.1:exon:1607	CmaCh00G002990.1:exon:1607	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh00G002990.1:cds	CmaCh00G002990.1:cds_6	CDS
CmaCh00G002990.1:cds	CmaCh00G002990.1:cds_5	CDS
CmaCh00G002990.1:cds	CmaCh00G002990.1:cds_4	CDS
CmaCh00G002990.1:cds	CmaCh00G002990.1:cds_3	CDS
CmaCh00G002990.1:cds	CmaCh00G002990.1:cds_2	CDS
CmaCh00G002990.1:cds	CmaCh00G002990.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh00G002990.1	CmaCh00G002990.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity