CmaCh00G002730.1 (mRNA) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G002730.1
Type	mRNA
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	S-protein homolog
Location	Cma_Chr00: 22096376 .. 22100620 (-)
Sequence length	681
RNA-Seq Expression	CmaCh00G002730.1
Synteny	CmaCh00G002730.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCAAGACGAGGAAAATGGAGGGGAGATCAATGATCTAGTTGAAGAAGTCCAGAAGAATGAGGAGGAATTGGAAGATTGGATTCATTTGGCACTTATTACAAGAAGAATTGTTAAAACTCAAGTTACGGATGTTGATGATCAAAGAGACAACTTGTTCCACACGCGGTGTTTAGTCAAGGGGACTGCTTGTAGTCTTGTCATTGATAGTGGAAGTTGCACCAATGTTGTAAGTACCATGTTGATCAAAAGGTTGCAAATTCCGACCCAAGATCATCCTAAATCTTACAAGCTCCAATGACTCAATGATAGTGGAACAATGAAGGTAGTTTCTCAAGCTTTAATATCTTTTACTTTGAAAAAATATAAAGATGAAGTTCTTTGTGATGGCAATTTGATAGGAGGGTTATGTATGATAGCTATTTGAATAGGTATTCTTTTGTAAAAGATGGTAGAAAAACCATTCTTGTACCTTTGAGTTTTGCAAATGTATTTGCTGATCAATTAAAGTTGGAGAAAAGAAAGAAAGAGTGTGAGGAAAAAGAGTTAAAAAAACAAGAGTTGAGTGAAAAAATAGAGAAAAATCTAAGGAAAAAAAGAAGAAGAATGAAAAAAGAGATGAAATTGAAGAAAAAAGGAAGAGAGAGTTATTTGGCTACGGTTGTAGAGGTGAGAAGGTTTTCACAAAAATCGATTTTTGTACTTGTGTACAATGGAGGATTTTTGGTCTCTAACTATAACAACATGGCTTTGCCGGGTATTTTTCAATCTCTTTTCCAGGAATTTGAAGAAATGTTTCAAGATAAAGAAATACCTCTCATTGGAGGTACTGAACATAAAATAGATTTCATTCCAAGGACTGTTATTCCTTATAAGCCAGTTTATCGAGTCAATTCAACCGAGACAAAAGAAATTTGAAGGCAAGTGGAGGAGCACATGGAGAAGGGCTATGTACGGAAAAGTTTGAGACCATGTTCTATACGAGACTTATTGGTGCCAAAGAAAGATGAAACTTGGTGCATATGCATGGATAATAGAGTCATCCTATTCCTAGGTTAGATGATTTGCTTGTTTATTGCATGATTCGTGTCTAGATATAAAAATTATCTTGAAATCTGGATATCATCAAATTAGAATGCATGTAGAAGATGAATGGAAAACAACTTTCAATATTAAGTTTGGATTGTATGAATGGCTTGTTATGCCTTTTAGGTTAACTAATGCTCCTAGTACACCCATGCGCTTAATATATAATGTTTTGAGAAAATATATGAGAAAACATGTTGTTTATATTGATGATATTATAATTTATTTGAAGATTTTGCTTGATCACGTGGAACATGTTAAACTAGTTTTGTTTACACATAGAAAAGAGAAATTTAATTTTAATAAGGGTAGTTTTTGCATAGAAAAAGTTAACTCTATTGGCTTCATAGTTGGTAAAAGTAGAGTAGCTTTAGATAGAGACAAAGTTAAATTCATTATGGATTTGCCAATACCAAAAAGTGCACGTAAATTTTGGAGTTTTCACGAGTTTGCTAACCTCTATAAGAGATTTATAAATGATTTTAGAACCATAACTGAACTATTGAATGACTTAGTGAAAAAGAATATTGTTTTTAAATGGGGAGAAATGCAAGAGAATGCATAAAATTTTCTTAAGAAGAAATTAAGCAAACCATCATTTGTTTTGGCTAGCTTTGATAAAATTATAGAAATTGATGTGATGTATGTGGTTTGGGCATAAGTGTTGTTTTAATTCAAGATGAAAAGTACTTAATATATTTTAGTAAAAAACTAAATGAGCCAACATTAAAATATGCTACCTATGATAAAGAATTATTTGCTTTAGTTCATATATTGCATGTGTGGCAACCCTACTTATGGCCTAGAGAATTGGTGATCCATTTTGATCCTGAAAGCTTAAAGTATGTGAAGGGTCAAAGCAAACTGAATCATAGACATGCAAAGTGGGTGGAATTTATTGAAACATTTTTGTATGTATTCAAATATAAGCAAAGTAATATGGTAGCTGATGTGTTATCTAAAAGGTACGATCTCTTTACTTCTCTTAGTGCAAAAATTCTTGAACTTGAGCATATTACTTAATTATATAGAGATGACCAAGATTTCAAAAATATTTATGTATCTTGTCTTGCAAAAAAAAGCTATGGATTGTTATTATTTGTTTCATAAATTTTTTATGCTCTGTATTCCTAAATGCTCTATAAAAGATTTGCTTTGGAGAGAAGCACATGGTCGTGCCTTAATGGGACATCTCAGGATTACTAAAGTTTATAAGATGTTGCATAAACACTTCTTTTGGTCGAAGATGAAGCACGATATCCAAAAGTTTTGTAGCAAATGTTTTAAACGCTAAGAAACTAAATCTAGATCACAACCAAACGAATTTTATACTCATTTGAATGTACCTAAAAAACCTTGGACTAATATATCTATACAATTTGTTCTTGGCTGACTGCACACTAAAAATGGTAAAGATTGTATTTTTGTTGTGGCAGATATGTCATTTTTTTTTCTGATTCGAGGACGAATCCGATTCAAAAAAATATGTCAACAACAGAATTTGAACATATGCGCAAAGAGCTCAATTAATTTCAAACCTATCGCATTTGAATGTACCTATCAAGCCTTGATCAAGTTAGATTGTGGAGTGACTCAATTTAGAACAAGGTTCCAAATCTTGCTTCTAGATCTTCGATCGTAAGAGGTAATCTAATTCTAGCCTTATCTCTAGGTTGATCCAAATTTCATATAAGGAGGTATTGATTACTTTGATTCAAGGGTTCTTGCTAAAACAAAAGCTTGGATCGTTGGGCTGAGGATTTGGGTAACCTTATCACTTAGTACGAGCTGAAATACCTTGGACCCAGCCTCCTATGACCATAATTCTAAATGGCAAGCATGCCTCCGTGGAGAGCACGTAGTAGCCCTAGACAGTATAGAAAATGCCTTGGTACAAACCACATAAGTAGACCTAAGAAATATTGTTCATACAACCAAAGACGATCACTATAGGAATTAAACACCCCTCAAAGCAAACCACTACCTCAATTGAATTGAGTTTTGGTTAAGTTGGGAAGTTGCGAGATAAAATCCACCAATAATGAGAATGAAGCAATGGAAGTCATGACTTCAAGGTTTGGTCGGAGGCTTCACGAACTAAGTTCAAGTTTATGGACTTCCAAAAGTGTGATGTGCCCTTTATGCCACTAATGAGATATGGGGTGTAGGATATTCCTATTGATGGATCACCTAATGGATGACAAGTCGTTTTGGACCTTATGGATGACAATTCTTATTTGAAACTATAGTTCTAGAATTTTTTGAACTTATCTGTTCTCCCTCACCTTAAAATTTCTAAGGTCCTCGTAAAAAGTTTGAAAGTTCAACTTAAAAAAATAAATCGGGAATTTAATACCTTGAGCGCTATACCATATGTAATCTGTGAATTGCTTTCTCTATTTTATATTTTCTACTGGAAAGTATGCATATTTTGTTGTCCATTTTATGAAAGTATTTTAAAAATCAATCAAATATTTATTATTCTTGGGCTAGTAACTCAGGAATTTTGTTATTGAAAATCTAATAAATCTCTAAAATTATCCCAAAATTAACCTTAAATTGTGTTGCATAACCGAAATTAGTTAAATCATTAAGTTTTTTACAACCATAGCATGCATTTACATAGTTTCTTGCATGTACTATAAGTATGTATATTTATTCACATGTCCAACACAAATTGGTAGTTAAGCTAAAGGTGTATTAGGAAATGATAAAGAATATTGTCGTTTTCTTTCTTTTTACGGTGGCTTTAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGGATCTATAAAAGATAG

mRNA sequence

ATGAACCAAGACGAGGAAAATGGAGGGGAGATCAATGATCTAGTTGAAGAAGTCCAGAAGAATGAGGAGGAATTGGAAGATTGGATTCATTTGGCACTTATTACAAGAAGAATTGTTAAAACTCAAGTTACGGATGTTGATGATCAAAGAGACAACTTGTTCCACACGCGGTGTTTAGTCAAGGGGACTGCTTGTAGTCTTGTCATTGATAGTGGAAGTTGCACCAATGTTGAATTTGAAGAAATGTTTCAAGATAAAGAAATACCTCTCATTGGAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGGATCTATAAAAGATAG

Coding sequence (CDS)

ATGAACCAAGACGAGGAAAATGGAGGGGAGATCAATGATCTAGTTGAAGAAGTCCAGAAGAATGAGGAGGAATTGGAAGATTGGATTCATTTGGCACTTATTACAAGAAGAATTGTTAAAACTCAAGTTACGGATGTTGATGATCAAAGAGACAACTTGTTCCACACGCGGTGTTTAGTCAAGGGGACTGCTTGTAGTCTTGTCATTGATAGTGGAAGTTGCACCAATGTTGAATTTGAAGAAATGTTTCAAGATAAAGAAATACCTCTCATTGGAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCTAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGGATCTATAAAAGATAG

Protein sequence

MNQDEENGGEINDLVEEVQKNEEELEDWIHLALITRRIVKTQVTDVDDQRDNLFHTRCLVKGTACSLVIDSGSCTNVEFEEMFQDKEIPLIGVGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKWIYKR

Homology

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BLAST of CmaCh00G002730.1 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.1e-15
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 105 PGPSRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCK 164
           P  S + + VVNGL+    L +HC+SK+DDLG    L   + + WNF  N   +T +WC 
Sbjct: 36  PKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEIN-LKFRNRFSWNFGENMLHSTFFWCY 95

Query: 165 LETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKW 223
           +   + +++   FW +   + L  RC       CIWTAK DG+YL N  +  D L  KW
Sbjct: 96  MNKDNGHMNVNVFWDD---VILFHRCGW---KNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-14
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 105 PGPSRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCK 164
           P  S + + V NGL+    L +HC+SK++DLG    L   D + WNF  N   +TL+WC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDIN-LKFLDRFSWNFGENMLHSTLFWCY 95

Query: 165 LETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKW 223
           +     +++ + FW +   + L  RC       C+WTAK+DG+YL N     D L  KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDW---KNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 125 VHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLW 184
           VHC+S+DDD G+H +L  G  Y W F VNF  +TLY+C              +   +   
Sbjct: 46  VHCKSRDDDHGFH-ILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKKGVFDIYKAVRD-- 105

Query: 185 LRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKWI 224
              RC++     C W AK+DGIY    +   + L +KW+
Sbjct: 106 -SSRCRN-----CTWEAKEDGIYGYGEIPKKNPLFYKWL 135

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 115 VNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFE 174
           +N  +K  L VHC+SK++D+G  + L  G+   ++FK NFWGTT +WC L     Y  + 
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGV-KYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYR 91

Query: 175 SFWP-ETQHLWLRDRCKHGTVGTCIWTAKDDGIY 208
                +   L+ +D   +       W A+DDGIY
Sbjct: 92  GITAYQAIGLFAKDGSSYN------WLARDDGIY 118

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.2e-08
Identity = 35/116 (30.17%), Postives = 61/116 (52.59%), Query Frame = 0


Query: 108 SRYYIHVVNGL-SKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLET 167
           S+  + + N L ++L LL HC+SKDDDLG +R L  G+ + ++F   F+G TLY+C    
Sbjct: 46  SKRTVEINNDLGNQLTLLYHCKSKDDDLG-NRTLQPGESWSFSFGRQFFGRTLYFCSFSW 105

Query: 168 PHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKW 223
           P+   SF+  + + +     ++C+      C+W  + +G    N      +L + W
Sbjct: 106 PNESHSFD-IYKDHRDSGGDNKCES---DRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy TrEMBL
Match: A0A6J1IIX8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111473724 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.9e-80
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 16  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 75

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 76  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 135

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 136 ANVDELIHKWIYKR 149

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy TrEMBL
Match: A0A6J1EYX0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111439907 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.6e-80
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGA+VPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 16  VGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 75

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 76  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 135

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 136 ANVDELIHKWIYKR 149

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy TrEMBL
Match: A0A6J1FLX9 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111445169 PE=3 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.6e-80
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGA+VPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 4   VGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 63

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 64  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 123

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 124 ANVDELIHKWIYKR 137

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy TrEMBL
Match: A0A6J1IFH8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111473967 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.6e-80
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 16  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 75

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPH YVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 76  NFWGTTLYWCKLETPHTYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 135

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 136 ANVDELIHKWIYKR 149

[Close]

BLAST of CmaCh00G002730.1 vs. ExPASy TrEMBL
Match: A0A6J1IEF3 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111473303 PE=3 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.5e-79
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 5   VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 64

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 65  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 124

Query: 213 ANVDELIHKWIYKR 227
           ANVD LIHKWIYKR
Sbjct: 125 ANVDALIHKWIYKR 138

[Close]

BLAST of CmaCh00G002730.1 vs. NCBI nr
Match: XP_022974914.1 (S-protein homolog 1-like [Cucurbita maxima] >XP_022975224.1 S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 308.1 bits (788), Expect = 6.1e-80
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 16  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 75

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 76  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 135

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 136 ANVDELIHKWIYKR 149

[Close]

BLAST of CmaCh00G002730.1 vs. NCBI nr
Match: XP_022939175.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 307.0 bits (785), Expect = 1.4e-79
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGA+VPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 4   VGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 63

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 64  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 123

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 124 ANVDELIHKWIYKR 137

[Close]

BLAST of CmaCh00G002730.1 vs. NCBI nr
Match: XP_022933132.1 (S-protein homolog 1-like [Cucurbita moschata] >XP_022933133.1 S-protein homolog 1-like [Cucurbita moschata] >XP_022933274.1 S-protein homolog 1-like [Cucurbita moschata] >XP_022933275.1 S-protein homolog 1-like [Cucurbita moschata] >XP_022933276.1 S-protein homolog 1-like [Cucurbita moschata] >XP_022933291.1 S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 307.0 bits (785), Expect = 1.4e-79
Identity = 133/134 (99.25%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGA+VPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 16  VGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 75

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 76  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 135

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 136 ANVDELIHKWIYKR 149

[Close]

BLAST of CmaCh00G002730.1 vs. NCBI nr
Match: XP_022975020.1 (S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-79
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 16  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 75

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPH YVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 76  NFWGTTLYWCKLETPHTYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 135

Query: 213 ANVDELIHKWIYKR 227
           ANVDELIHKWIYKR
Sbjct: 136 ANVDELIHKWIYKR 149

[Close]

BLAST of CmaCh00G002730.1 vs. NCBI nr
Match: XP_022974620.1 (S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 305.8 bits (782), Expect = 3.0e-79
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0


Query: 93  VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 152
           VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV
Sbjct: 5   VGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKV 64

Query: 153 NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 212
           NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL
Sbjct: 65  NFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFL 124

Query: 213 ANVDELIHKWIYKR 227
           ANVD LIHKWIYKR
Sbjct: 125 ANVDALIHKWIYKR 138

[Close]

BLAST of CmaCh00G002730.1 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-16
Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 105 PGPSRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCK 164
           P  S + + VVNGL+    L +HC+SK+DDLG    L   + + WNF  N   +T +WC 
Sbjct: 36  PKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEIN-LKFRNRFSWNFGENMLHSTFFWCY 95

Query: 165 LETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKW 223
           +   + +++   FW +   + L  RC       CIWTAK DG+YL N  +  D L  KW
Sbjct: 96  MNKDNGHMNVNVFWDD---VILFHRCGW---KNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of CmaCh00G002730.1 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-15
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 105 PGPSRYYIHVVNGLSK-LGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCK 164
           P  S + + V NGL+    L +HC+SK++DLG    L   D + WNF  N   +TL+WC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDIN-LKFLDRFSWNFGENMLHSTLFWCY 95

Query: 165 LETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKW 223
           +     +++ + FW +   + L  RC       C+WTAK+DG+YL N     D L  KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDW---KNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of CmaCh00G002730.1 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 62.0 bits (149), Expect = 7.1e-10
Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 115 VNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFE 174
           +N  +K  L VHC+SK++D+G  + L  G+   ++FK NFWGTT +WC L     Y  + 
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGV-KYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYR 91

Query: 175 SFWP-ETQHLWLRDRCKHGTVGTCIWTAKDDGIY 208
                +   L+ +D   +       W A+DDGIY
Sbjct: 92  GITAYQAIGLFAKDGSSYN------WLARDDGIY 118

[Close]

BLAST of CmaCh00G002730.1 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-10
Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 119 SKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLET-PH-----AYVS 178
           SKL L VHC+SKDDDLG H +L  G DY++ F  N W TT + C+++  P+      +V+
Sbjct: 38  SKL-LKVHCRSKDDDLGEH-ILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVA 97

Query: 179 FESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIY 208
           +E+ W +                +C W  ++DGIY
Sbjct: 98  YETSWSKALE------------ASCKWIGREDGIY 118

[Close]

BLAST of CmaCh00G002730.1 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-09
Identity = 32/99 (32.32%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 125 VHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLW 184
           +HC+SKDDDLG+H +   G+ Y W F VNF  +TLY+C                  +  +
Sbjct: 61  IHCKSKDDDLGFH-IHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNKGVFDIDRAERDFY 120

Query: 185 LRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKWI 224
              RC++     C W AK D +Y  + L        KW+
Sbjct: 121 ---RCRN-----CTWNAKKDSLYGYSNLPQTVTWFFKWL 150

The following BLAST results are available for this feature:

BLAST of CmaCh00G002730.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	7.1e-15	36.97	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	2.1e-14	36.13	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F2Q9V4	1.8e-10	34.34	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9LW22	1.0e-08	35.11	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
F4JLQ5	2.2e-08	30.17	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of CmaCh00G002730.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IIX8	2.9e-80	100.00	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111473724 PE=3 SV=1	[more]
A0A6J1EYX0	6.6e-80	99.25	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111439907 PE=3 SV=1	[more]
A0A6J1FLX9	6.6e-80	99.25	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111445169 PE=3 SV=1	[more]
A0A6J1IFH8	8.6e-80	99.25	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111473967 PE=3 SV=1	[more]
A0A6J1IEF3	1.5e-79	99.25	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111473303 PE=3 SV=1	[more]

BLAST of CmaCh00G002730.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974914.1	6.1e-80	100.00	S-protein homolog 1-like [Cucurbita maxima] >XP_022975224.1 S-protein homolog 1-...	[more]
XP_022939175.1	1.4e-79	99.25	S-protein homolog 1-like [Cucurbita moschata]	[more]
XP_022933132.1	1.4e-79	99.25	S-protein homolog 1-like [Cucurbita moschata] >XP_022933133.1 S-protein homolog ...	[more]
XP_022975020.1	1.8e-79	99.25	S-protein homolog 1-like [Cucurbita maxima]	[more]
XP_022974620.1	3.0e-79	99.25	S-protein homolog 1-like [Cucurbita maxima]	[more]

BLAST of CmaCh00G002730.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	5.1e-16	36.97	S-protein homologue 1	[more]
AT4G29035.1	1.5e-15	36.13	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	7.1e-10	35.11	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	9.3e-10	36.84	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	2.1e-09	32.32	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 108..224
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 112..222 e-value: 3.3E-22 score: 79.0
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 108..224

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmaCh00G002730	CmaCh00G002730	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh00G002730.1:exon:1580	CmaCh00G002730.1:exon:1580	exon
CmaCh00G002730.1:exon:1581	CmaCh00G002730.1:exon:1581	exon
CmaCh00G002730.1:exon:1582	CmaCh00G002730.1:exon:1582	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmaCh00G002730.1:cds	CmaCh00G002730.1:cds_3	CDS
CmaCh00G002730.1:cds	CmaCh00G002730.1:cds_2	CDS
CmaCh00G002730.1:cds	CmaCh00G002730.1:cds	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmaCh00G002730.1	CmaCh00G002730.1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region