CmUC11G215480.1 (mRNA) Watermelon (USVL531) v1

Overview
NameCmUC11G215480.1
TypemRNA
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr11: 23091566 .. 23091934 (-)
Sequence length279
RNA-Seq ExpressionCmUC11G215480.1
SyntenyCmUC11G215480.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGCATTGACCTTGAAAACGAAAGTGATGGCGTGCGGTAGGAAACGGATCTCCGGCAGCGTGAGGCGGTGGCGTGCGACAATGGCGTTCGGCAGTAGGAAGCGTTGCTGGAGCAGATCTGAGGCAGCGGCGGTGGGAGCAGATCCCCGGCGATGGTGTTAGGCAGCCTTCAGCCTCAGGCGTCAGATTTCAGCGTCGAGCTTCAGGCGTCGACGTTAGGCGTCAAGCTTCAGGCGTTAGGCATCTGCGGCATGCGGCGTGGAGCTTCAGGCGTTGGGCGTGCGGCATCGGGAGTCAGGCGTACTCATATTCCGGCGTCAGGTGGCGGTGGCGTGTGGCGTGCTGTCTGTGCGGCCGCTAGCTAG

mRNA sequence

ATGTTGAGCATTGACCTTGAAAACGAAAGTGATGGCGTGCGCGGCGGTGGGAGCAGATCCCCGGCGATGGTGTTAGGCAGCCTTCAGCCTCAGGCGTCAGATTTCAGCGTCGAGCTTCAGGCGTCGACGTTAGGCGTCAAGCTTCAGGCGTTAGGCATCTGCGGCATGCGGCGTGGAGCTTCAGGCGTTGGGCGTGCGGCATCGGGAGTCAGGCGTACTCATATTCCGGCGTCAGGTGGCGGTGGCGTGTGGCGTGCTGTCTGTGCGGCCGCTAGCTAG

Coding sequence (CDS)

ATGTTGAGCATTGACCTTGAAAACGAAAGTGATGGCGTGCGCGGCGGTGGGAGCAGATCCCCGGCGATGGTGTTAGGCAGCCTTCAGCCTCAGGCGTCAGATTTCAGCGTCGAGCTTCAGGCGTCGACGTTAGGCGTCAAGCTTCAGGCGTTAGGCATCTGCGGCATGCGGCGTGGAGCTTCAGGCGTTGGGCGTGCGGCATCGGGAGTCAGGCGTACTCATATTCCGGCGTCAGGTGGCGGTGGCGTGTGGCGTGCTGTCTGTGCGGCCGCTAGCTAG

Protein sequence

MLSIDLENESDGVRGGGSRSPAMVLGSLQPQASDFSVELQASTLGVKLQALGICGMRRGASGVGRAASGVRRTHIPASGGGGVWRAVCAAAS
Homology
The following BLAST results are available for this feature:
BLAST of CmUC11G215480.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC11G215480.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC11G215480.1 vs.
Match NameE-valueIdentityDescription
BLAST of CmUC11G215480.1 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmUC11G215480CmUC11G215480gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC11G215480.1-exonCmUC11G215480.1-exon-CmU531Chr11:23091566..23091803exon
CmUC11G215480.1-exonCmUC11G215480.1-exon-CmU531Chr11:23091894..23091934exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmUC11G215480.1-cdsCmUC11G215480.1-cds-CmU531Chr11:23091566..23091803CDS
CmUC11G215480.1-cdsCmUC11G215480.1-cds-CmU531Chr11:23091894..23091934CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmUC11G215480.1CmUC11G215480.1-proteinpolypeptide